Experiment: BWC1S MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00045 and OHPLBJKB_00046 are separated by 52 nucleotides OHPLBJKB_00046 and OHPLBJKB_00047 are separated by 120 nucleotides
OHPLBJKB_00045: OHPLBJKB_00045 - Alpha-xylosidase, at 46,781 to 49,099
_00045
OHPLBJKB_00046: OHPLBJKB_00046 - hypothetical protein, at 49,152 to 50,861
_00046
OHPLBJKB_00047: OHPLBJKB_00047 - Xanthine permease XanP, at 50,982 to 52,373
_00047
Position (kb) 49
50
51 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 48.235 kb on + strand, within OHPLBJKB_00045 at 48.235 kb on + strand, within OHPLBJKB_00045 at 48.235 kb on + strand, within OHPLBJKB_00045 at 48.239 kb on + strand, within OHPLBJKB_00045 at 48.240 kb on - strand, within OHPLBJKB_00045 at 48.240 kb on - strand, within OHPLBJKB_00045 at 48.331 kb on + strand, within OHPLBJKB_00045 at 48.331 kb on + strand, within OHPLBJKB_00045 at 48.396 kb on + strand, within OHPLBJKB_00045 at 48.397 kb on - strand, within OHPLBJKB_00045 at 48.397 kb on - strand, within OHPLBJKB_00045 at 48.431 kb on + strand, within OHPLBJKB_00045 at 48.432 kb on - strand, within OHPLBJKB_00045 at 48.494 kb on + strand, within OHPLBJKB_00045 at 48.587 kb on + strand, within OHPLBJKB_00045 at 48.602 kb on + strand, within OHPLBJKB_00045 at 48.602 kb on + strand, within OHPLBJKB_00045 at 48.602 kb on + strand, within OHPLBJKB_00045 at 48.602 kb on + strand, within OHPLBJKB_00045 at 48.602 kb on + strand, within OHPLBJKB_00045 at 48.602 kb on + strand, within OHPLBJKB_00045 at 48.603 kb on - strand, within OHPLBJKB_00045 at 48.603 kb on - strand, within OHPLBJKB_00045 at 48.603 kb on - strand, within OHPLBJKB_00045 at 48.603 kb on - strand, within OHPLBJKB_00045 at 48.603 kb on - strand, within OHPLBJKB_00045 at 48.603 kb on - strand, within OHPLBJKB_00045 at 48.603 kb on - strand, within OHPLBJKB_00045 at 48.603 kb on - strand, within OHPLBJKB_00045 at 48.765 kb on - strand, within OHPLBJKB_00045 at 48.765 kb on - strand, within OHPLBJKB_00045 at 48.776 kb on - strand, within OHPLBJKB_00045 at 48.818 kb on + strand, within OHPLBJKB_00045 at 48.916 kb on + strand at 48.916 kb on + strand at 48.916 kb on + strand at 48.916 kb on + strand at 48.917 kb on - strand at 48.917 kb on - strand at 48.917 kb on - strand at 48.921 kb on + strand at 48.921 kb on + strand at 48.922 kb on - strand at 48.922 kb on - strand at 48.934 kb on + strand at 48.935 kb on - strand at 48.935 kb on - strand at 48.935 kb on - strand at 48.935 kb on - strand at 48.935 kb on - strand at 48.949 kb on + strand at 48.949 kb on + strand at 49.011 kb on + strand at 49.012 kb on - strand at 49.012 kb on - strand at 49.090 kb on + strand at 49.090 kb on + strand at 49.090 kb on + strand at 49.090 kb on + strand at 49.091 kb on - strand at 49.091 kb on - strand at 49.091 kb on - strand at 49.091 kb on - strand at 49.091 kb on - strand at 49.097 kb on + strand at 49.097 kb on + strand at 49.097 kb on + strand at 49.097 kb on + strand at 49.097 kb on + strand at 49.098 kb on - strand at 49.102 kb on + strand at 49.102 kb on + strand at 49.102 kb on + strand at 49.102 kb on + strand at 49.102 kb on + strand at 49.102 kb on + strand at 49.121 kb on - strand at 49.175 kb on + strand at 49.176 kb on - strand at 49.176 kb on - strand at 49.176 kb on - strand at 49.265 kb on + strand at 49.266 kb on - strand at 49.293 kb on - strand at 49.338 kb on + strand, within OHPLBJKB_00046 at 49.338 kb on + strand, within OHPLBJKB_00046 at 49.339 kb on - strand, within OHPLBJKB_00046 at 49.484 kb on + strand, within OHPLBJKB_00046 at 49.598 kb on + strand, within OHPLBJKB_00046 at 49.599 kb on - strand, within OHPLBJKB_00046 at 49.630 kb on + strand, within OHPLBJKB_00046 at 49.701 kb on - strand, within OHPLBJKB_00046 at 49.778 kb on + strand, within OHPLBJKB_00046 at 49.778 kb on + strand, within OHPLBJKB_00046 at 49.778 kb on + strand, within OHPLBJKB_00046 at 49.778 kb on + strand, within OHPLBJKB_00046 at 49.778 kb on + strand, within OHPLBJKB_00046 at 49.778 kb on + strand, within OHPLBJKB_00046 at 49.778 kb on + strand, within OHPLBJKB_00046 at 49.779 kb on - strand, within OHPLBJKB_00046 at 49.779 kb on - strand, within OHPLBJKB_00046 at 49.779 kb on - strand, within OHPLBJKB_00046 at 49.779 kb on - strand, within OHPLBJKB_00046 at 49.779 kb on - strand, within OHPLBJKB_00046 at 49.780 kb on + strand, within OHPLBJKB_00046 at 49.923 kb on + strand, within OHPLBJKB_00046 at 49.923 kb on + strand, within OHPLBJKB_00046 at 49.924 kb on - strand, within OHPLBJKB_00046 at 49.924 kb on - strand, within OHPLBJKB_00046 at 49.938 kb on + strand, within OHPLBJKB_00046 at 49.938 kb on + strand, within OHPLBJKB_00046 at 49.954 kb on + strand, within OHPLBJKB_00046 at 49.954 kb on + strand, within OHPLBJKB_00046 at 49.955 kb on - strand, within OHPLBJKB_00046 at 49.955 kb on - strand, within OHPLBJKB_00046 at 49.955 kb on - strand, within OHPLBJKB_00046 at 50.127 kb on + strand, within OHPLBJKB_00046 at 50.358 kb on - strand, within OHPLBJKB_00046 at 50.358 kb on - strand, within OHPLBJKB_00046 at 50.415 kb on + strand, within OHPLBJKB_00046 at 50.428 kb on - strand, within OHPLBJKB_00046 at 50.469 kb on - strand, within OHPLBJKB_00046 at 50.477 kb on + strand, within OHPLBJKB_00046 at 50.736 kb on - strand at 50.759 kb on + strand at 50.759 kb on + strand at 50.759 kb on + strand at 50.759 kb on + strand at 50.759 kb on + strand at 50.760 kb on - strand at 50.760 kb on - strand at 50.760 kb on - strand at 50.760 kb on - strand at 50.760 kb on - strand at 50.794 kb on + strand at 50.833 kb on + strand at 50.834 kb on - strand at 50.887 kb on + strand at 50.887 kb on + strand at 50.887 kb on + strand at 50.887 kb on + strand at 50.888 kb on - strand at 50.896 kb on + strand at 50.896 kb on + strand at 50.896 kb on + strand at 50.897 kb on - strand at 50.958 kb on - strand at 50.961 kb on + strand at 50.961 kb on + strand at 50.961 kb on + strand at 50.961 kb on + strand at 50.961 kb on + strand at 50.962 kb on - strand at 50.983 kb on + strand at 50.984 kb on - strand at 50.984 kb on - strand at 51.026 kb on + strand at 51.030 kb on - strand at 51.182 kb on + strand, within OHPLBJKB_00047 at 51.216 kb on + strand, within OHPLBJKB_00047 at 51.216 kb on + strand, within OHPLBJKB_00047 at 51.216 kb on + strand, within OHPLBJKB_00047 at 51.216 kb on + strand, within OHPLBJKB_00047 at 51.216 kb on + strand, within OHPLBJKB_00047 at 51.216 kb on + strand, within OHPLBJKB_00047 at 51.216 kb on + strand, within OHPLBJKB_00047 at 51.217 kb on - strand, within OHPLBJKB_00047 at 51.326 kb on - strand, within OHPLBJKB_00047 at 51.460 kb on + strand, within OHPLBJKB_00047 at 51.539 kb on + strand, within OHPLBJKB_00047 at 51.539 kb on + strand, within OHPLBJKB_00047 at 51.592 kb on + strand, within OHPLBJKB_00047 at 51.592 kb on + strand, within OHPLBJKB_00047 at 51.593 kb on - strand, within OHPLBJKB_00047 at 51.593 kb on - strand, within OHPLBJKB_00047 at 51.593 kb on - strand, within OHPLBJKB_00047 at 51.611 kb on + strand, within OHPLBJKB_00047 at 51.611 kb on + strand, within OHPLBJKB_00047 at 51.611 kb on + strand, within OHPLBJKB_00047 at 51.612 kb on - strand, within OHPLBJKB_00047 at 51.612 kb on - strand, within OHPLBJKB_00047 at 51.715 kb on - strand, within OHPLBJKB_00047 at 51.718 kb on + strand, within OHPLBJKB_00047 at 51.718 kb on + strand, within OHPLBJKB_00047 at 51.719 kb on - strand, within OHPLBJKB_00047 at 51.725 kb on + strand, within OHPLBJKB_00047 at 51.726 kb on - strand, within OHPLBJKB_00047 at 51.726 kb on - strand, within OHPLBJKB_00047 at 51.750 kb on + strand, within OHPLBJKB_00047 at 51.750 kb on + strand, within OHPLBJKB_00047 at 51.750 kb on + strand, within OHPLBJKB_00047 at 51.751 kb on - strand, within OHPLBJKB_00047
Per-strain Table
Position Strand Gene LocusTag Fraction BWC1S MOI10 remove 48,235 + OHPLBJKB_00045 0.63 -0.2 48,235 + OHPLBJKB_00045 0.63 +6.2 48,235 + OHPLBJKB_00045 0.63 +1.0 48,239 + OHPLBJKB_00045 0.63 -0.6 48,240 - OHPLBJKB_00045 0.63 -0.9 48,240 - OHPLBJKB_00045 0.63 -2.8 48,331 + OHPLBJKB_00045 0.67 -0.3 48,331 + OHPLBJKB_00045 0.67 -0.6 48,396 + OHPLBJKB_00045 0.70 -2.0 48,397 - OHPLBJKB_00045 0.70 -2.6 48,397 - OHPLBJKB_00045 0.70 +0.7 48,431 + OHPLBJKB_00045 0.71 -1.7 48,432 - OHPLBJKB_00045 0.71 -0.8 48,494 + OHPLBJKB_00045 0.74 +0.1 48,587 + OHPLBJKB_00045 0.78 -0.0 48,602 + OHPLBJKB_00045 0.79 -2.5 48,602 + OHPLBJKB_00045 0.79 +0.6 48,602 + OHPLBJKB_00045 0.79 -0.2 48,602 + OHPLBJKB_00045 0.79 -0.6 48,602 + OHPLBJKB_00045 0.79 +2.1 48,602 + OHPLBJKB_00045 0.79 -0.2 48,603 - OHPLBJKB_00045 0.79 +1.1 48,603 - OHPLBJKB_00045 0.79 -2.1 48,603 - OHPLBJKB_00045 0.79 -0.3 48,603 - OHPLBJKB_00045 0.79 -1.3 48,603 - OHPLBJKB_00045 0.79 -0.4 48,603 - OHPLBJKB_00045 0.79 -0.2 48,603 - OHPLBJKB_00045 0.79 -1.6 48,603 - OHPLBJKB_00045 0.79 -0.4 48,765 - OHPLBJKB_00045 0.86 +0.8 48,765 - OHPLBJKB_00045 0.86 -0.7 48,776 - OHPLBJKB_00045 0.86 -0.2 48,818 + OHPLBJKB_00045 0.88 -1.4 48,916 + +1.3 48,916 + +0.3 48,916 + +0.9 48,916 + +3.5 48,917 - +0.1 48,917 - -0.6 48,917 - +0.5 48,921 + -1.3 48,921 + +1.8 48,922 - -0.3 48,922 - +0.4 48,934 + +0.1 48,935 - +1.0 48,935 - +0.1 48,935 - -0.6 48,935 - +1.0 48,935 - -0.1 48,949 + +0.5 48,949 + -0.2 49,011 + +0.1 49,012 - +1.6 49,012 - -1.6 49,090 + -0.5 49,090 + -1.1 49,090 + +0.8 49,090 + -1.6 49,091 - -0.3 49,091 - -2.2 49,091 - -1.3 49,091 - +0.3 49,091 - +0.1 49,097 + -1.2 49,097 + -0.2 49,097 + -0.2 49,097 + -0.2 49,097 + -1.6 49,098 - +2.1 49,102 + -2.0 49,102 + +1.0 49,102 + +0.3 49,102 + +1.0 49,102 + -0.5 49,102 + +0.1 49,121 - +1.5 49,175 + +0.6 49,176 - +0.0 49,176 - -1.0 49,176 - -0.1 49,265 + +2.0 49,266 - +0.6 49,293 - -1.8 49,338 + OHPLBJKB_00046 0.11 -2.1 49,338 + OHPLBJKB_00046 0.11 +0.3 49,339 - OHPLBJKB_00046 0.11 -1.7 49,484 + OHPLBJKB_00046 0.19 -1.8 49,598 + OHPLBJKB_00046 0.26 -0.9 49,599 - OHPLBJKB_00046 0.26 -0.6 49,630 + OHPLBJKB_00046 0.28 -2.7 49,701 - OHPLBJKB_00046 0.32 -0.4 49,778 + OHPLBJKB_00046 0.37 +0.3 49,778 + OHPLBJKB_00046 0.37 -0.3 49,778 + OHPLBJKB_00046 0.37 -0.6 49,778 + OHPLBJKB_00046 0.37 +0.8 49,778 + OHPLBJKB_00046 0.37 -1.2 49,778 + OHPLBJKB_00046 0.37 +0.5 49,778 + OHPLBJKB_00046 0.37 -1.5 49,779 - OHPLBJKB_00046 0.37 +0.8 49,779 - OHPLBJKB_00046 0.37 +1.8 49,779 - OHPLBJKB_00046 0.37 +0.7 49,779 - OHPLBJKB_00046 0.37 -1.9 49,779 - OHPLBJKB_00046 0.37 +0.4 49,780 + OHPLBJKB_00046 0.37 +0.9 49,923 + OHPLBJKB_00046 0.45 +0.6 49,923 + OHPLBJKB_00046 0.45 -0.3 49,924 - OHPLBJKB_00046 0.45 -1.0 49,924 - OHPLBJKB_00046 0.45 -1.6 49,938 + OHPLBJKB_00046 0.46 +0.2 49,938 + OHPLBJKB_00046 0.46 +0.4 49,954 + OHPLBJKB_00046 0.47 -1.2 49,954 + OHPLBJKB_00046 0.47 -1.2 49,955 - OHPLBJKB_00046 0.47 -1.9 49,955 - OHPLBJKB_00046 0.47 -1.0 49,955 - OHPLBJKB_00046 0.47 -0.5 50,127 + OHPLBJKB_00046 0.57 +0.1 50,358 - OHPLBJKB_00046 0.71 +0.0 50,358 - OHPLBJKB_00046 0.71 -0.3 50,415 + OHPLBJKB_00046 0.74 +0.9 50,428 - OHPLBJKB_00046 0.75 -0.6 50,469 - OHPLBJKB_00046 0.77 -1.2 50,477 + OHPLBJKB_00046 0.77 -0.4 50,736 - +0.8 50,759 + -1.8 50,759 + +0.7 50,759 + -1.6 50,759 + +0.2 50,759 + -0.0 50,760 - +0.5 50,760 - +0.7 50,760 - -0.9 50,760 - -0.3 50,760 - -1.1 50,794 + -0.7 50,833 + +0.5 50,834 - +0.8 50,887 + -0.1 50,887 + +1.2 50,887 + +0.4 50,887 + -0.4 50,888 - +0.9 50,896 + -0.2 50,896 + -1.4 50,896 + +0.4 50,897 - +1.1 50,958 - +1.7 50,961 + -0.4 50,961 + -0.3 50,961 + -1.8 50,961 + -0.9 50,961 + -1.8 50,962 - +0.7 50,983 + -0.8 50,984 - +0.0 50,984 - +0.5 51,026 + +1.2 51,030 - -1.4 51,182 + OHPLBJKB_00047 0.14 -1.4 51,216 + OHPLBJKB_00047 0.17 -1.1 51,216 + OHPLBJKB_00047 0.17 +1.3 51,216 + OHPLBJKB_00047 0.17 +0.4 51,216 + OHPLBJKB_00047 0.17 -0.6 51,216 + OHPLBJKB_00047 0.17 -1.0 51,216 + OHPLBJKB_00047 0.17 +0.5 51,216 + OHPLBJKB_00047 0.17 +2.0 51,217 - OHPLBJKB_00047 0.17 +0.2 51,326 - OHPLBJKB_00047 0.25 -1.4 51,460 + OHPLBJKB_00047 0.34 -0.9 51,539 + OHPLBJKB_00047 0.40 +0.3 51,539 + OHPLBJKB_00047 0.40 -1.7 51,592 + OHPLBJKB_00047 0.44 -1.1 51,592 + OHPLBJKB_00047 0.44 +0.6 51,593 - OHPLBJKB_00047 0.44 -1.0 51,593 - OHPLBJKB_00047 0.44 +0.9 51,593 - OHPLBJKB_00047 0.44 +0.6 51,611 + OHPLBJKB_00047 0.45 -0.5 51,611 + OHPLBJKB_00047 0.45 -1.0 51,611 + OHPLBJKB_00047 0.45 +0.4 51,612 - OHPLBJKB_00047 0.45 +0.2 51,612 - OHPLBJKB_00047 0.45 -1.1 51,715 - OHPLBJKB_00047 0.53 -2.0 51,718 + OHPLBJKB_00047 0.53 -0.3 51,718 + OHPLBJKB_00047 0.53 -0.6 51,719 - OHPLBJKB_00047 0.53 -1.7 51,725 + OHPLBJKB_00047 0.53 -0.3 51,726 - OHPLBJKB_00047 0.53 -0.9 51,726 - OHPLBJKB_00047 0.53 +3.1 51,750 + OHPLBJKB_00047 0.55 -1.4 51,750 + OHPLBJKB_00047 0.55 +1.2 51,750 + OHPLBJKB_00047 0.55 -1.5 51,751 - OHPLBJKB_00047 0.55 -0.3
Or see this region's nucleotide sequence