Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04158

Experiment: EBB2 MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EBB2 MOI1
4,374,087	-		OHPLBJKB_04157	0.60	+0.3
4,374,104	+		OHPLBJKB_04157	0.61	+0.6
4,374,105	-		OHPLBJKB_04157	0.61	+0.9
4,374,152	+		OHPLBJKB_04157	0.63	+1.3
4,374,152	+		OHPLBJKB_04157	0.63	-1.2
4,374,152	+		OHPLBJKB_04157	0.63	-1.8
4,374,152	+		OHPLBJKB_04157	0.63	-0.4
4,374,153	-		OHPLBJKB_04157	0.63	+0.8
4,374,153	-		OHPLBJKB_04157	0.63	+3.6
4,374,327	+		OHPLBJKB_04157	0.70	+0.6
4,374,327	+		OHPLBJKB_04157	0.70	-0.3
4,374,328	-		OHPLBJKB_04157	0.70	-1.8
4,374,429	+		OHPLBJKB_04157	0.75	-2.0
4,374,430	-		OHPLBJKB_04157	0.75	+1.0
4,374,430	-		OHPLBJKB_04157	0.75	-1.2
4,374,430	-		OHPLBJKB_04157	0.75	+0.2
4,374,430	-		OHPLBJKB_04157	0.75	-2.6
4,374,430	-		OHPLBJKB_04157	0.75	+1.1
4,374,467	+		OHPLBJKB_04157	0.76	+0.8
4,374,540	+		OHPLBJKB_04157	0.79	+0.2
4,374,540	+		OHPLBJKB_04157	0.79	+0.1
4,374,570	-		OHPLBJKB_04157	0.80	-0.0
4,374,590	+		OHPLBJKB_04157	0.81	-2.5
4,374,612	-		OHPLBJKB_04157	0.82	-0.9
4,374,675	+		OHPLBJKB_04157	0.85	-1.3
4,374,675	+		OHPLBJKB_04157	0.85	+0.3
4,374,676	-		OHPLBJKB_04157	0.85	-1.6
4,374,676	-		OHPLBJKB_04157	0.85	-2.1
4,374,700	-		OHPLBJKB_04157	0.86	+1.7
4,374,776	+		OHPLBJKB_04157	0.89	+0.5
4,374,777	-		OHPLBJKB_04157	0.89	-2.1
4,374,828	+				+0.3
4,374,828	+				+0.4
4,374,828	+				+0.0
4,374,828	+				-0.2
4,374,829	-				-0.3
4,374,829	-				+0.7
4,374,829	-				+1.3
4,374,829	-				+1.7
4,374,829	-				+0.8
4,374,829	-				+0.1
4,375,007	+				-0.4
4,375,008	-				-0.8
4,375,008	-				-0.4
4,375,008	-				+0.6
4,375,052	+				+1.0
4,375,052	+				-0.1
4,375,052	+				+3.3
4,375,052	+				-1.9
4,375,052	+				-0.2
4,375,052	+				-2.0
4,375,052	+				-1.0
4,375,053	-				+0.1
4,375,053	-				+1.3
4,375,053	-				+1.1
4,375,053	-				+0.3
4,375,053	-				+0.1
4,375,053	-				-1.0
4,375,059	+				+0.2
4,375,248	+		OHPLBJKB_04158	0.22	-0.4
4,375,267	+		OHPLBJKB_04158	0.24	+1.4
4,375,352	+		OHPLBJKB_04158	0.33	-1.7
4,375,352	+		OHPLBJKB_04158	0.33	-0.0
4,375,352	+		OHPLBJKB_04158	0.33	+0.7
4,375,352	+		OHPLBJKB_04158	0.33	+0.3
4,375,353	-		OHPLBJKB_04158	0.33	+0.6
4,375,353	-		OHPLBJKB_04158	0.33	-1.6
4,375,353	-		OHPLBJKB_04158	0.33	+2.8
4,375,407	-		OHPLBJKB_04158	0.39	-0.6
4,375,407	-		OHPLBJKB_04158	0.39	-0.9
4,375,407	-		OHPLBJKB_04158	0.39	-2.3
4,375,413	+		OHPLBJKB_04158	0.40	-1.1
4,375,414	-		OHPLBJKB_04158	0.40	-0.4
4,375,532	+		OHPLBJKB_04158	0.53	-0.7
4,375,532	+		OHPLBJKB_04158	0.53	-1.0
4,375,532	+		OHPLBJKB_04158	0.53	+0.9
4,375,533	-		OHPLBJKB_04158	0.53	-0.1
4,375,533	-		OHPLBJKB_04158	0.53	+0.3
4,375,692	+		OHPLBJKB_04158	0.71	+1.7
4,375,692	+		OHPLBJKB_04158	0.71	+0.1
4,375,693	-		OHPLBJKB_04158	0.71	+0.6
4,375,715	+		OHPLBJKB_04158	0.73	+0.1
4,375,715	+		OHPLBJKB_04158	0.73	+1.1
4,375,728	+		OHPLBJKB_04158	0.75	-0.6
4,375,728	+		OHPLBJKB_04158	0.75	+0.3
4,375,728	+		OHPLBJKB_04158	0.75	-0.0
4,375,728	+		OHPLBJKB_04158	0.75	+1.0
4,375,728	+		OHPLBJKB_04158	0.75	+0.1
4,375,728	+		OHPLBJKB_04158	0.75	-0.8
4,375,729	-		OHPLBJKB_04158	0.75	-0.2
4,375,729	-		OHPLBJKB_04158	0.75	+1.9
4,375,729	-		OHPLBJKB_04158	0.75	+0.7
4,375,729	-		OHPLBJKB_04158	0.75	-0.6
4,375,729	-		OHPLBJKB_04158	0.75	-1.9
4,375,729	-		OHPLBJKB_04158	0.75	-0.8
4,375,729	-		OHPLBJKB_04158	0.75	-0.3
4,375,854	-		OHPLBJKB_04158	0.89	-0.3
4,375,868	+				-1.5
4,375,878	+				+2.1
4,375,878	+				+0.5
4,375,996	+				+2.7
4,375,996	+				-0.0
4,376,191	-		OHPLBJKB_04159	0.38	+2.1
4,376,191	-		OHPLBJKB_04159	0.38	-1.3
4,376,191	-		OHPLBJKB_04159	0.38	+1.6
4,376,206	+		OHPLBJKB_04159	0.40	-0.6
4,376,207	-		OHPLBJKB_04159	0.40	-1.9
4,376,230	+		OHPLBJKB_04159	0.44	-0.4
4,376,253	+		OHPLBJKB_04159	0.47	-1.9
4,376,253	+		OHPLBJKB_04159	0.47	+0.2
4,376,253	+		OHPLBJKB_04159	0.47	+1.7
4,376,253	+		OHPLBJKB_04159	0.47	+1.0
4,376,254	-		OHPLBJKB_04159	0.47	+0.3
4,376,254	-		OHPLBJKB_04159	0.47	-1.1
4,376,254	-		OHPLBJKB_04159	0.47	-0.2
4,376,254	-		OHPLBJKB_04159	0.47	-0.8
4,376,254	-		OHPLBJKB_04159	0.47	+2.2
4,376,270	+		OHPLBJKB_04159	0.50	+1.3
4,376,271	-		OHPLBJKB_04159	0.50	-1.1
4,376,272	+		OHPLBJKB_04159	0.50	-0.5
4,376,272	+		OHPLBJKB_04159	0.50	-1.9
4,376,273	-		OHPLBJKB_04159	0.50	-0.2
4,376,273	-		OHPLBJKB_04159	0.50	+1.3
4,376,308	+		OHPLBJKB_04159	0.56	+0.1
4,376,308	+		OHPLBJKB_04159	0.56	-1.0
4,376,309	-		OHPLBJKB_04159	0.56	-0.4
4,376,357	+		OHPLBJKB_04159	0.64	+0.0
4,376,431	-		OHPLBJKB_04159	0.75	+0.7
4,376,452	+		OHPLBJKB_04159	0.79	-0.1
4,376,452	+		OHPLBJKB_04159	0.79	-1.9
4,376,452	+		OHPLBJKB_04159	0.79	-2.5
4,376,452	+		OHPLBJKB_04159	0.79	+0.2
4,376,452	+		OHPLBJKB_04159	0.79	-0.5
4,376,453	-		OHPLBJKB_04159	0.79	-0.1
4,376,453	-		OHPLBJKB_04159	0.79	+0.3
4,376,453	-		OHPLBJKB_04159	0.79	-1.6
4,376,453	-		OHPLBJKB_04159	0.79	+0.1
4,376,453	-		OHPLBJKB_04159	0.79	+0.1
4,376,453	-		OHPLBJKB_04159	0.79	+2.0
4,376,456	+		OHPLBJKB_04159	0.79	+0.5
4,376,456	+		OHPLBJKB_04159	0.79	-1.4
4,376,456	+		OHPLBJKB_04159	0.79	-0.1
4,376,457	-		OHPLBJKB_04159	0.79	-0.1
4,376,457	-		OHPLBJKB_04159	0.79	-1.3
4,376,457	-		OHPLBJKB_04159	0.79	-1.7
4,376,510	-		OHPLBJKB_04159	0.88	+1.9
4,376,590	-				-0.7
4,376,635	-				+1.4
4,376,658	-				-0.3
4,376,682	-		OHPLBJKB_04160	0.11	-0.9
4,376,684	-		OHPLBJKB_04160	0.11	-0.1
4,376,724	+		OHPLBJKB_04160	0.15	+1.5
4,376,725	-		OHPLBJKB_04160	0.15	+0.2
4,376,740	+		OHPLBJKB_04160	0.17	-1.3
4,376,788	+		OHPLBJKB_04160	0.22	+1.7