Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04112

Experiment: EBB2 MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EBB2 MOI1
4,327,979	+		OHPLBJKB_04111	0.38	+0.7
4,327,979	+		OHPLBJKB_04111	0.38	-1.0
4,327,979	+		OHPLBJKB_04111	0.38	-0.1
4,327,979	+		OHPLBJKB_04111	0.38	+1.0
4,327,979	+		OHPLBJKB_04111	0.38	-0.3
4,327,979	+		OHPLBJKB_04111	0.38	+1.8
4,328,010	+		OHPLBJKB_04111	0.41	-0.2
4,328,010	+		OHPLBJKB_04111	0.41	-2.2
4,328,056	-		OHPLBJKB_04111	0.45	-1.0
4,328,077	+		OHPLBJKB_04111	0.47	-0.8
4,328,077	+		OHPLBJKB_04111	0.47	+1.5
4,328,077	+		OHPLBJKB_04111	0.47	-1.5
4,328,078	-		OHPLBJKB_04111	0.47	+0.9
4,328,078	-		OHPLBJKB_04111	0.47	+0.6
4,328,078	-		OHPLBJKB_04111	0.47	+0.3
4,328,134	+		OHPLBJKB_04111	0.52	+0.9
4,328,134	+		OHPLBJKB_04111	0.52	+0.2
4,328,134	+		OHPLBJKB_04111	0.52	+0.2
4,328,134	+		OHPLBJKB_04111	0.52	-1.8
4,328,134	+		OHPLBJKB_04111	0.52	+1.1
4,328,135	-		OHPLBJKB_04111	0.52	+1.7
4,328,135	-		OHPLBJKB_04111	0.52	-1.1
4,328,135	-		OHPLBJKB_04111	0.52	-1.9
4,328,135	-		OHPLBJKB_04111	0.52	+1.8
4,328,135	-		OHPLBJKB_04111	0.52	-0.1
4,328,152	+		OHPLBJKB_04111	0.53	+0.1
4,328,152	+		OHPLBJKB_04111	0.53	+0.5
4,328,153	-		OHPLBJKB_04111	0.53	+0.4
4,328,165	-		OHPLBJKB_04111	0.54	+0.4
4,328,253	+		OHPLBJKB_04111	0.62	-2.2
4,328,253	+		OHPLBJKB_04111	0.62	-0.5
4,328,559	-		OHPLBJKB_04111	0.88	-0.3
4,328,559	-		OHPLBJKB_04111	0.88	+0.6
4,328,595	+				+0.8
4,328,596	-				-0.9
4,328,596	-				-1.2
4,328,597	+				+0.8
4,328,597	+				-0.0
4,328,598	-				+0.7
4,328,598	-				-2.5
4,328,598	-				-1.6
4,328,598	-				-1.7
4,328,598	-				+1.7
4,328,637	-				-0.3
4,328,637	-				+0.7
4,328,653	+				-1.3
4,328,685	+				-0.4
4,328,830	+				+0.3
4,328,830	+				-2.3
4,328,832	+				-2.2
4,328,832	+				+2.0
4,328,833	-				+1.2
4,328,833	-				-1.4
4,328,833	-				-1.2
4,328,839	+				+0.2
4,328,859	+				+0.3
4,328,859	+				-1.1
4,328,859	+				+1.0
4,328,859	+				-0.9
4,328,859	+				-1.4
4,328,860	-				-0.7
4,328,860	-				-0.6
4,328,860	-				+1.0
4,328,893	+				+0.2
4,328,893	+				-0.6
4,328,894	-				+1.0
4,328,894	-				-0.1
4,328,894	-				+0.3
4,328,894	-				-0.8
4,328,961	+				-0.4
4,328,961	+				-0.9
4,328,961	+				+0.3
4,328,961	+				-0.0
4,328,961	+				-0.0
4,328,961	+				+1.9
4,328,961	+				+1.3
4,328,961	+				-0.0
4,328,961	+				-0.9
4,328,961	+				-0.4
4,328,962	-				-0.3
4,328,962	-				+6.8
4,328,962	-				+1.4
4,328,962	-				-0.5
4,328,962	-				-0.9
4,328,962	-				-0.2
4,328,962	-				-0.3
4,328,962	-				-1.8
4,328,962	-				+0.3
4,328,962	-				+0.3
4,328,962	-				+1.3
4,328,962	-				+0.5
4,328,962	-				-0.3
4,328,965	+				+0.7
4,328,965	+				+0.5
4,328,965	+				+0.9
4,328,965	+				+0.7
4,328,966	-				+1.0
4,328,992	+				-1.0
4,328,992	+				+0.7
4,328,992	+				+0.3
4,328,993	-				+1.7
4,328,994	+				-0.6
4,328,994	+				-0.6
4,328,994	+				-0.9
4,328,994	+				+0.1
4,328,994	+				-1.4
4,328,994	+				-0.3
4,328,995	-				+0.5
4,329,064	-		OHPLBJKB_04112	0.29	-0.7
4,329,064	-		OHPLBJKB_04112	0.29	+0.3
4,329,283	+				-0.3
4,329,286	+				-1.1
4,329,287	-				-0.7
4,329,329	+				+0.7
4,329,344	+				+1.9
4,329,352	-				+1.1
4,329,454	-				+0.5
4,329,455	+				+0.4
4,329,455	+				-0.6
4,329,455	+				-0.5
4,329,455	+				-0.3
4,329,455	+				+1.9
4,329,455	+				-1.0
4,329,456	-				+0.5
4,329,456	-				+1.9
4,329,456	-				+0.5
4,329,467	+				+0.7
4,329,467	+				+0.5
4,329,468	-				+1.1
4,329,468	-				+1.2
4,329,468	-				-0.1
4,329,468	-				+0.3
4,329,468	-				-1.9
4,329,468	-				+0.2
4,329,468	-				+1.3
4,329,472	-				+0.4
4,329,513	-				-0.8
4,329,579	+		OHPLBJKB_04113	0.18	+0.4
4,329,579	+		OHPLBJKB_04113	0.18	-0.6
4,329,613	-		OHPLBJKB_04113	0.23	-1.6
4,329,613	-		OHPLBJKB_04113	0.23	-0.6
4,329,624	+		OHPLBJKB_04113	0.25	-0.4
4,329,682	+		OHPLBJKB_04113	0.34	+0.6
4,329,682	+		OHPLBJKB_04113	0.34	+1.1
4,329,683	-		OHPLBJKB_04113	0.35	-2.8
4,329,683	-		OHPLBJKB_04113	0.35	-0.7
4,329,683	-		OHPLBJKB_04113	0.35	-1.1
4,329,727	+		OHPLBJKB_04113	0.42	-1.8
4,329,727	+		OHPLBJKB_04113	0.42	+1.1
4,329,727	+		OHPLBJKB_04113	0.42	-1.6
4,329,727	+		OHPLBJKB_04113	0.42	-0.2
4,329,727	+		OHPLBJKB_04113	0.42	-0.8
4,329,728	-		OHPLBJKB_04113	0.42	-0.8
4,329,728	-		OHPLBJKB_04113	0.42	-1.3
4,329,728	-		OHPLBJKB_04113	0.42	+1.6
4,329,728	-		OHPLBJKB_04113	0.42	-1.0
4,329,728	-		OHPLBJKB_04113	0.42	-1.3
4,329,728	-		OHPLBJKB_04113	0.42	-0.4
4,329,728	-		OHPLBJKB_04113	0.42	-0.7
4,329,728	-		OHPLBJKB_04113	0.42	-1.5
4,329,728	-		OHPLBJKB_04113	0.42	-1.7
4,329,807	+		OHPLBJKB_04113	0.55	+0.2
4,329,850	+		OHPLBJKB_04113	0.62	-0.7
4,329,850	+		OHPLBJKB_04113	0.62	+1.1
4,329,851	-		OHPLBJKB_04113	0.62	-0.2
4,329,851	-		OHPLBJKB_04113	0.62	+0.1
4,329,957	+		OHPLBJKB_04113	0.80	-2.2
4,329,958	-		OHPLBJKB_04113	0.80	-0.5
4,329,984	+		OHPLBJKB_04113	0.84	-1.7
4,329,985	-		OHPLBJKB_04113	0.84	+0.8
4,330,004	+		OHPLBJKB_04113	0.87	+1.1
4,330,004	+		OHPLBJKB_04113	0.87	-3.0
4,330,005	-		OHPLBJKB_04113	0.88	-1.8
4,330,005	-		OHPLBJKB_04113	0.88	-0.7
4,330,005	-		OHPLBJKB_04113	0.88	-0.7
4,330,079	-				+0.1
4,330,128	+				+1.9
4,330,129	-				+2.4
4,330,188	+		OHPLBJKB_04114	0.16	+0.1
4,330,188	+		OHPLBJKB_04114	0.16	+0.6
4,330,189	-		OHPLBJKB_04114	0.16	+1.8
4,330,189	-		OHPLBJKB_04114	0.16	-0.0
4,330,189	-		OHPLBJKB_04114	0.16	-2.1
4,330,191	+		OHPLBJKB_04114	0.17	-1.0
4,330,191	+		OHPLBJKB_04114	0.17	+0.2
4,330,191	+		OHPLBJKB_04114	0.17	+0.5
4,330,192	-		OHPLBJKB_04114	0.17	-0.8
4,330,192	-		OHPLBJKB_04114	0.17	-0.6
4,330,192	-		OHPLBJKB_04114	0.17	+0.6
4,330,195	+		OHPLBJKB_04114	0.17	+0.1
4,330,195	+		OHPLBJKB_04114	0.17	+0.2
4,330,195	+		OHPLBJKB_04114	0.17	-0.3
4,330,195	+		OHPLBJKB_04114	0.17	-1.6
4,330,195	+		OHPLBJKB_04114	0.17	+0.3
4,330,195	+		OHPLBJKB_04114	0.17	-0.5
4,330,196	-		OHPLBJKB_04114	0.17	-1.2
4,330,198	-		OHPLBJKB_04114	0.18	-0.9