Experiment: EBB2 MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00786 and OHPLBJKB_00787 are separated by 21 nucleotides OHPLBJKB_00787 and OHPLBJKB_00788 overlap by 4 nucleotides OHPLBJKB_00788 and OHPLBJKB_00789 are separated by 284 nucleotides
OHPLBJKB_00786: OHPLBJKB_00786 - Fructose-1,6-bisphosphatase 2 class 2, at 807,208 to 808,173
_00786
OHPLBJKB_00787: OHPLBJKB_00787 - Fumarase E, at 808,195 to 808,704
_00787
OHPLBJKB_00788: OHPLBJKB_00788 - Pantothenate kinase, at 808,701 to 809,414
_00788
OHPLBJKB_00789: OHPLBJKB_00789 - D-erythrose-4-phosphate dehydrogenase, at 809,699 to 810,718
_00789
Position (kb) 808
809
810 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6 at 807.809 kb on - strand, within OHPLBJKB_00786 at 807.820 kb on + strand, within OHPLBJKB_00786 at 807.820 kb on + strand, within OHPLBJKB_00786 at 807.820 kb on + strand, within OHPLBJKB_00786 at 807.820 kb on + strand, within OHPLBJKB_00786 at 807.820 kb on + strand, within OHPLBJKB_00786 at 807.821 kb on - strand, within OHPLBJKB_00786 at 807.821 kb on - strand, within OHPLBJKB_00786 at 807.821 kb on - strand, within OHPLBJKB_00786 at 807.821 kb on - strand, within OHPLBJKB_00786 at 807.821 kb on - strand, within OHPLBJKB_00786 at 807.821 kb on - strand, within OHPLBJKB_00786 at 807.821 kb on - strand, within OHPLBJKB_00786 at 807.821 kb on - strand, within OHPLBJKB_00786 at 807.885 kb on + strand, within OHPLBJKB_00786 at 807.919 kb on - strand, within OHPLBJKB_00786 at 808.003 kb on + strand, within OHPLBJKB_00786 at 808.003 kb on + strand, within OHPLBJKB_00786 at 808.003 kb on + strand, within OHPLBJKB_00786 at 808.003 kb on + strand, within OHPLBJKB_00786 at 808.004 kb on - strand, within OHPLBJKB_00786 at 808.121 kb on + strand at 808.121 kb on + strand at 808.149 kb on + strand at 808.149 kb on + strand at 808.150 kb on - strand at 808.152 kb on + strand at 808.152 kb on + strand at 808.152 kb on + strand at 808.152 kb on + strand at 808.152 kb on + strand at 808.152 kb on + strand at 808.152 kb on + strand at 808.152 kb on + strand at 808.153 kb on - strand at 808.153 kb on - strand at 808.153 kb on - strand at 808.153 kb on - strand at 808.153 kb on - strand at 808.153 kb on - strand at 808.153 kb on - strand at 808.153 kb on - strand at 808.154 kb on + strand at 808.154 kb on + strand at 808.154 kb on + strand at 808.154 kb on + strand at 808.154 kb on + strand at 808.154 kb on + strand at 808.154 kb on + strand at 808.154 kb on + strand at 808.154 kb on + strand at 808.155 kb on - strand at 808.155 kb on - strand at 808.155 kb on - strand at 808.155 kb on - strand at 808.155 kb on - strand at 808.155 kb on - strand at 808.157 kb on + strand at 808.157 kb on + strand at 808.158 kb on - strand at 808.158 kb on - strand at 808.158 kb on - strand at 808.250 kb on + strand, within OHPLBJKB_00787 at 808.251 kb on - strand, within OHPLBJKB_00787 at 808.251 kb on - strand, within OHPLBJKB_00787 at 808.260 kb on + strand, within OHPLBJKB_00787 at 808.261 kb on - strand, within OHPLBJKB_00787 at 808.261 kb on - strand, within OHPLBJKB_00787 at 808.348 kb on + strand, within OHPLBJKB_00787 at 808.348 kb on + strand, within OHPLBJKB_00787 at 808.348 kb on + strand, within OHPLBJKB_00787 at 808.349 kb on - strand, within OHPLBJKB_00787 at 808.418 kb on - strand, within OHPLBJKB_00787 at 808.437 kb on + strand, within OHPLBJKB_00787 at 808.437 kb on + strand, within OHPLBJKB_00787 at 808.447 kb on + strand, within OHPLBJKB_00787 at 808.447 kb on + strand, within OHPLBJKB_00787 at 808.580 kb on - strand, within OHPLBJKB_00787 at 808.694 kb on + strand at 808.714 kb on + strand at 808.715 kb on - strand at 808.735 kb on + strand at 808.771 kb on + strand at 808.772 kb on - strand at 808.775 kb on + strand, within OHPLBJKB_00788 at 808.775 kb on + strand, within OHPLBJKB_00788 at 808.775 kb on + strand, within OHPLBJKB_00788 at 808.775 kb on + strand, within OHPLBJKB_00788 at 808.776 kb on - strand, within OHPLBJKB_00788 at 808.776 kb on - strand, within OHPLBJKB_00788 at 808.804 kb on + strand, within OHPLBJKB_00788 at 808.805 kb on - strand, within OHPLBJKB_00788 at 808.814 kb on - strand, within OHPLBJKB_00788 at 808.830 kb on - strand, within OHPLBJKB_00788 at 808.959 kb on + strand, within OHPLBJKB_00788 at 808.959 kb on + strand, within OHPLBJKB_00788 at 808.960 kb on - strand, within OHPLBJKB_00788 at 808.960 kb on - strand, within OHPLBJKB_00788 at 808.960 kb on - strand, within OHPLBJKB_00788 at 808.960 kb on - strand, within OHPLBJKB_00788 at 808.964 kb on + strand, within OHPLBJKB_00788 at 808.964 kb on + strand, within OHPLBJKB_00788 at 808.965 kb on - strand, within OHPLBJKB_00788 at 808.965 kb on - strand, within OHPLBJKB_00788 at 808.965 kb on - strand, within OHPLBJKB_00788 at 809.069 kb on + strand, within OHPLBJKB_00788 at 809.069 kb on + strand, within OHPLBJKB_00788 at 809.069 kb on + strand, within OHPLBJKB_00788 at 809.070 kb on - strand, within OHPLBJKB_00788 at 809.070 kb on - strand, within OHPLBJKB_00788 at 809.082 kb on + strand, within OHPLBJKB_00788 at 809.083 kb on - strand, within OHPLBJKB_00788 at 809.219 kb on + strand, within OHPLBJKB_00788 at 809.258 kb on + strand, within OHPLBJKB_00788 at 809.264 kb on + strand, within OHPLBJKB_00788 at 809.265 kb on - strand, within OHPLBJKB_00788 at 809.282 kb on - strand, within OHPLBJKB_00788 at 809.294 kb on - strand, within OHPLBJKB_00788 at 809.294 kb on - strand, within OHPLBJKB_00788 at 809.307 kb on + strand, within OHPLBJKB_00788 at 809.307 kb on + strand, within OHPLBJKB_00788 at 809.307 kb on + strand, within OHPLBJKB_00788 at 809.308 kb on - strand, within OHPLBJKB_00788 at 809.308 kb on - strand, within OHPLBJKB_00788 at 809.308 kb on - strand, within OHPLBJKB_00788 at 809.351 kb on + strand at 809.372 kb on - strand at 809.372 kb on - strand at 809.374 kb on + strand at 809.375 kb on - strand at 809.375 kb on - strand at 809.397 kb on + strand at 809.440 kb on + strand at 809.444 kb on - strand at 809.444 kb on - strand at 809.505 kb on + strand at 809.505 kb on + strand at 809.505 kb on + strand at 809.505 kb on + strand at 809.505 kb on + strand at 809.505 kb on + strand at 809.505 kb on + strand at 809.506 kb on - strand at 809.539 kb on + strand at 809.556 kb on - strand at 809.597 kb on + strand at 809.597 kb on + strand at 809.625 kb on + strand at 809.626 kb on - strand at 809.626 kb on - strand at 809.654 kb on - strand at 809.654 kb on - strand at 809.698 kb on + strand at 809.698 kb on + strand at 809.698 kb on + strand at 809.698 kb on + strand at 809.698 kb on + strand at 809.699 kb on - strand at 809.719 kb on - strand at 809.762 kb on + strand at 809.762 kb on + strand at 809.762 kb on + strand at 809.762 kb on + strand at 809.762 kb on + strand at 809.763 kb on - strand at 809.763 kb on - strand at 809.763 kb on - strand at 809.789 kb on - strand at 809.846 kb on + strand, within OHPLBJKB_00789 at 809.847 kb on - strand, within OHPLBJKB_00789 at 809.847 kb on - strand, within OHPLBJKB_00789 at 809.880 kb on + strand, within OHPLBJKB_00789 at 809.929 kb on - strand, within OHPLBJKB_00789 at 809.982 kb on + strand, within OHPLBJKB_00789 at 809.983 kb on - strand, within OHPLBJKB_00789 at 809.983 kb on - strand, within OHPLBJKB_00789 at 809.983 kb on - strand, within OHPLBJKB_00789 at 810.003 kb on + strand, within OHPLBJKB_00789 at 810.003 kb on + strand, within OHPLBJKB_00789 at 810.003 kb on + strand, within OHPLBJKB_00789 at 810.003 kb on + strand, within OHPLBJKB_00789 at 810.004 kb on - strand, within OHPLBJKB_00789 at 810.004 kb on - strand, within OHPLBJKB_00789 at 810.004 kb on - strand, within OHPLBJKB_00789 at 810.151 kb on + strand, within OHPLBJKB_00789 at 810.177 kb on + strand, within OHPLBJKB_00789 at 810.198 kb on + strand, within OHPLBJKB_00789 at 810.278 kb on + strand, within OHPLBJKB_00789 at 810.279 kb on - strand, within OHPLBJKB_00789 at 810.337 kb on + strand, within OHPLBJKB_00789 at 810.338 kb on - strand, within OHPLBJKB_00789
Per-strain Table
Position Strand Gene LocusTag Fraction EBB2 MOI1 remove 807,809 - OHPLBJKB_00786 0.62 -0.3 807,820 + OHPLBJKB_00786 0.63 -0.2 807,820 + OHPLBJKB_00786 0.63 +0.7 807,820 + OHPLBJKB_00786 0.63 -1.9 807,820 + OHPLBJKB_00786 0.63 -0.4 807,820 + OHPLBJKB_00786 0.63 +0.6 807,821 - OHPLBJKB_00786 0.63 -0.8 807,821 - OHPLBJKB_00786 0.63 -2.0 807,821 - OHPLBJKB_00786 0.63 -0.5 807,821 - OHPLBJKB_00786 0.63 -0.9 807,821 - OHPLBJKB_00786 0.63 -0.5 807,821 - OHPLBJKB_00786 0.63 +0.6 807,821 - OHPLBJKB_00786 0.63 +1.2 807,821 - OHPLBJKB_00786 0.63 +1.0 807,885 + OHPLBJKB_00786 0.70 +1.2 807,919 - OHPLBJKB_00786 0.74 +0.0 808,003 + OHPLBJKB_00786 0.82 +0.1 808,003 + OHPLBJKB_00786 0.82 -1.4 808,003 + OHPLBJKB_00786 0.82 +0.2 808,003 + OHPLBJKB_00786 0.82 -0.8 808,004 - OHPLBJKB_00786 0.82 +5.9 808,121 + +3.0 808,121 + -1.5 808,149 + -1.6 808,149 + -2.1 808,150 - +2.5 808,152 + +1.7 808,152 + -1.6 808,152 + +0.0 808,152 + -0.2 808,152 + -0.2 808,152 + -2.3 808,152 + -0.7 808,152 + -1.5 808,153 - +0.1 808,153 - -1.6 808,153 - -0.6 808,153 - -1.5 808,153 - -0.1 808,153 - -0.2 808,153 - +0.5 808,153 - -1.6 808,154 + +1.0 808,154 + -2.1 808,154 + +0.6 808,154 + +2.0 808,154 + -0.1 808,154 + -0.6 808,154 + -0.4 808,154 + -1.5 808,154 + +0.0 808,155 - -1.0 808,155 - +0.3 808,155 - -0.5 808,155 - -1.7 808,155 - +1.2 808,155 - +0.9 808,157 + -1.1 808,157 + +0.0 808,158 - -0.2 808,158 - -1.5 808,158 - -0.5 808,250 + OHPLBJKB_00787 0.11 +0.6 808,251 - OHPLBJKB_00787 0.11 -1.7 808,251 - OHPLBJKB_00787 0.11 -1.6 808,260 + OHPLBJKB_00787 0.13 -0.6 808,261 - OHPLBJKB_00787 0.13 +1.7 808,261 - OHPLBJKB_00787 0.13 -1.3 808,348 + OHPLBJKB_00787 0.30 -1.3 808,348 + OHPLBJKB_00787 0.30 +1.4 808,348 + OHPLBJKB_00787 0.30 -2.3 808,349 - OHPLBJKB_00787 0.30 -1.0 808,418 - OHPLBJKB_00787 0.44 -0.3 808,437 + OHPLBJKB_00787 0.47 +0.6 808,437 + OHPLBJKB_00787 0.47 -0.3 808,447 + OHPLBJKB_00787 0.49 +1.2 808,447 + OHPLBJKB_00787 0.49 +0.7 808,580 - OHPLBJKB_00787 0.75 -1.5 808,694 + -0.6 808,714 + -1.1 808,715 - -1.9 808,735 + -0.9 808,771 + -0.4 808,772 - -0.5 808,775 + OHPLBJKB_00788 0.10 +0.5 808,775 + OHPLBJKB_00788 0.10 +1.3 808,775 + OHPLBJKB_00788 0.10 +0.6 808,775 + OHPLBJKB_00788 0.10 +2.2 808,776 - OHPLBJKB_00788 0.11 -0.5 808,776 - OHPLBJKB_00788 0.11 -0.7 808,804 + OHPLBJKB_00788 0.14 -0.4 808,805 - OHPLBJKB_00788 0.15 -0.1 808,814 - OHPLBJKB_00788 0.16 -1.2 808,830 - OHPLBJKB_00788 0.18 -1.4 808,959 + OHPLBJKB_00788 0.36 -0.3 808,959 + OHPLBJKB_00788 0.36 -0.8 808,960 - OHPLBJKB_00788 0.36 +0.5 808,960 - OHPLBJKB_00788 0.36 -2.1 808,960 - OHPLBJKB_00788 0.36 -1.3 808,960 - OHPLBJKB_00788 0.36 -1.1 808,964 + OHPLBJKB_00788 0.37 -1.4 808,964 + OHPLBJKB_00788 0.37 +1.1 808,965 - OHPLBJKB_00788 0.37 +1.6 808,965 - OHPLBJKB_00788 0.37 +0.5 808,965 - OHPLBJKB_00788 0.37 -0.3 809,069 + OHPLBJKB_00788 0.52 +0.4 809,069 + OHPLBJKB_00788 0.52 +0.8 809,069 + OHPLBJKB_00788 0.52 +0.8 809,070 - OHPLBJKB_00788 0.52 -0.5 809,070 - OHPLBJKB_00788 0.52 +0.0 809,082 + OHPLBJKB_00788 0.53 -0.5 809,083 - OHPLBJKB_00788 0.54 -1.1 809,219 + OHPLBJKB_00788 0.73 +0.2 809,258 + OHPLBJKB_00788 0.78 +1.7 809,264 + OHPLBJKB_00788 0.79 -0.9 809,265 - OHPLBJKB_00788 0.79 -0.8 809,282 - OHPLBJKB_00788 0.81 +0.0 809,294 - OHPLBJKB_00788 0.83 +0.1 809,294 - OHPLBJKB_00788 0.83 -0.3 809,307 + OHPLBJKB_00788 0.85 -2.3 809,307 + OHPLBJKB_00788 0.85 -2.1 809,307 + OHPLBJKB_00788 0.85 -0.3 809,308 - OHPLBJKB_00788 0.85 -1.0 809,308 - OHPLBJKB_00788 0.85 +0.5 809,308 - OHPLBJKB_00788 0.85 -1.6 809,351 + -0.6 809,372 - -1.0 809,372 - -0.5 809,374 + -1.8 809,375 - +0.0 809,375 - +0.2 809,397 + -1.0 809,440 + -2.0 809,444 - -2.3 809,444 - +1.5 809,505 + -1.9 809,505 + +0.9 809,505 + -0.2 809,505 + -0.6 809,505 + -2.1 809,505 + -0.6 809,505 + -0.7 809,506 - +1.6 809,539 + -0.2 809,556 - -2.1 809,597 + +1.6 809,597 + -0.9 809,625 + -0.9 809,626 - -0.5 809,626 - -2.1 809,654 - -0.2 809,654 - +0.2 809,698 + -1.7 809,698 + -1.0 809,698 + +0.7 809,698 + +0.2 809,698 + +0.7 809,699 - -0.9 809,719 - +0.6 809,762 + +1.5 809,762 + +0.0 809,762 + +0.6 809,762 + -0.3 809,762 + +0.2 809,763 - -1.2 809,763 - +0.7 809,763 - +0.6 809,789 - +0.6 809,846 + OHPLBJKB_00789 0.14 -0.5 809,847 - OHPLBJKB_00789 0.15 +1.2 809,847 - OHPLBJKB_00789 0.15 -1.2 809,880 + OHPLBJKB_00789 0.18 +0.6 809,929 - OHPLBJKB_00789 0.23 -0.3 809,982 + OHPLBJKB_00789 0.28 -1.7 809,983 - OHPLBJKB_00789 0.28 +1.6 809,983 - OHPLBJKB_00789 0.28 -1.3 809,983 - OHPLBJKB_00789 0.28 -1.0 810,003 + OHPLBJKB_00789 0.30 -0.3 810,003 + OHPLBJKB_00789 0.30 +1.0 810,003 + OHPLBJKB_00789 0.30 -1.2 810,003 + OHPLBJKB_00789 0.30 -0.3 810,004 - OHPLBJKB_00789 0.30 -0.8 810,004 - OHPLBJKB_00789 0.30 -0.2 810,004 - OHPLBJKB_00789 0.30 -0.9 810,151 + OHPLBJKB_00789 0.44 -2.0 810,177 + OHPLBJKB_00789 0.47 -0.3 810,198 + OHPLBJKB_00789 0.49 +1.5 810,278 + OHPLBJKB_00789 0.57 -0.6 810,279 - OHPLBJKB_00789 0.57 -1.3 810,337 + OHPLBJKB_00789 0.63 -0.7 810,338 - OHPLBJKB_00789 0.63 -0.8
Or see this region's nucleotide sequence