Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_16795 and OKGIIK_16800 are separated by 6 nucleotides OKGIIK_16800 and purH are separated by 163 nucleotides purH and OKGIIK_16810 are separated by 69 nucleotides OKGIIK_16810 and OKGIIK_16815 are separated by 145 nucleotides
OKGIIK_16795: OKGIIK_16795 - EamA-like transporter family, at 3,684,617 to 3,685,048
_16795
OKGIIK_16800: OKGIIK_16800 - Glutathione S-transferase, at 3,685,055 to 3,685,765
_16800
OKGIIK_16805: purH - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 3,685,929 to 3,687,539
purH
OKGIIK_16810: OKGIIK_16810 - Putative Fis-like DNA-binding protein, at 3,687,609 to 3,687,932
_16810
OKGIIK_16815: OKGIIK_16815 - DUF3426 domain-containing protein, at 3,688,078 to 3,688,938
_16815
Position (kb)
3685
3686
3687
3688 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3685.056 kb on + strand at 3685.056 kb on + strand at 3685.056 kb on + strand at 3685.056 kb on + strand at 3685.056 kb on + strand at 3685.057 kb on - strand at 3685.057 kb on - strand at 3685.081 kb on - strand at 3685.134 kb on + strand, within OKGIIK_16800 at 3685.135 kb on - strand, within OKGIIK_16800 at 3685.135 kb on - strand, within OKGIIK_16800 at 3685.135 kb on - strand, within OKGIIK_16800 at 3685.230 kb on + strand, within OKGIIK_16800 at 3685.230 kb on + strand, within OKGIIK_16800 at 3685.231 kb on - strand, within OKGIIK_16800 at 3685.272 kb on + strand, within OKGIIK_16800 at 3685.272 kb on + strand, within OKGIIK_16800 at 3685.272 kb on + strand, within OKGIIK_16800 at 3685.272 kb on + strand, within OKGIIK_16800 at 3685.272 kb on + strand, within OKGIIK_16800 at 3685.272 kb on + strand, within OKGIIK_16800 at 3685.272 kb on + strand, within OKGIIK_16800 at 3685.272 kb on + strand, within OKGIIK_16800 at 3685.272 kb on + strand, within OKGIIK_16800 at 3685.273 kb on - strand, within OKGIIK_16800 at 3685.273 kb on - strand, within OKGIIK_16800 at 3685.273 kb on - strand, within OKGIIK_16800 at 3685.273 kb on - strand, within OKGIIK_16800 at 3685.273 kb on - strand, within OKGIIK_16800 at 3685.273 kb on - strand, within OKGIIK_16800 at 3685.273 kb on - strand, within OKGIIK_16800 at 3685.273 kb on - strand, within OKGIIK_16800 at 3685.273 kb on - strand, within OKGIIK_16800 at 3685.329 kb on + strand, within OKGIIK_16800 at 3685.329 kb on + strand, within OKGIIK_16800 at 3685.329 kb on + strand, within OKGIIK_16800 at 3685.329 kb on + strand, within OKGIIK_16800 at 3685.330 kb on - strand, within OKGIIK_16800 at 3685.330 kb on - strand, within OKGIIK_16800 at 3685.330 kb on - strand, within OKGIIK_16800 at 3685.338 kb on + strand, within OKGIIK_16800 at 3685.338 kb on + strand, within OKGIIK_16800 at 3685.338 kb on + strand, within OKGIIK_16800 at 3685.339 kb on - strand, within OKGIIK_16800 at 3685.339 kb on - strand, within OKGIIK_16800 at 3685.404 kb on + strand, within OKGIIK_16800 at 3685.404 kb on + strand, within OKGIIK_16800 at 3685.404 kb on + strand, within OKGIIK_16800 at 3685.404 kb on + strand, within OKGIIK_16800 at 3685.404 kb on + strand, within OKGIIK_16800 at 3685.404 kb on + strand, within OKGIIK_16800 at 3685.404 kb on + strand, within OKGIIK_16800 at 3685.404 kb on + strand, within OKGIIK_16800 at 3685.405 kb on - strand, within OKGIIK_16800 at 3685.405 kb on - strand, within OKGIIK_16800 at 3685.405 kb on - strand, within OKGIIK_16800 at 3685.405 kb on - strand, within OKGIIK_16800 at 3685.405 kb on - strand, within OKGIIK_16800 at 3685.407 kb on + strand, within OKGIIK_16800 at 3685.407 kb on + strand, within OKGIIK_16800 at 3685.407 kb on + strand, within OKGIIK_16800 at 3685.407 kb on + strand, within OKGIIK_16800 at 3685.407 kb on + strand, within OKGIIK_16800 at 3685.407 kb on + strand, within OKGIIK_16800 at 3685.408 kb on - strand, within OKGIIK_16800 at 3685.408 kb on - strand, within OKGIIK_16800 at 3685.408 kb on - strand, within OKGIIK_16800 at 3685.408 kb on - strand, within OKGIIK_16800 at 3685.408 kb on - strand, within OKGIIK_16800 at 3685.488 kb on + strand, within OKGIIK_16800 at 3685.488 kb on + strand, within OKGIIK_16800 at 3685.488 kb on + strand, within OKGIIK_16800 at 3685.488 kb on + strand, within OKGIIK_16800 at 3685.488 kb on + strand, within OKGIIK_16800 at 3685.489 kb on - strand, within OKGIIK_16800 at 3685.489 kb on - strand, within OKGIIK_16800 at 3685.539 kb on + strand, within OKGIIK_16800 at 3685.539 kb on + strand, within OKGIIK_16800 at 3685.539 kb on + strand, within OKGIIK_16800 at 3685.539 kb on + strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.540 kb on - strand, within OKGIIK_16800 at 3685.635 kb on + strand, within OKGIIK_16800 at 3685.680 kb on + strand, within OKGIIK_16800 at 3685.680 kb on + strand, within OKGIIK_16800 at 3685.680 kb on + strand, within OKGIIK_16800 at 3685.680 kb on + strand, within OKGIIK_16800 at 3685.680 kb on + strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.681 kb on - strand, within OKGIIK_16800 at 3685.746 kb on + strand at 3685.746 kb on + strand at 3685.746 kb on + strand at 3685.746 kb on + strand at 3685.746 kb on + strand at 3685.747 kb on - strand at 3685.749 kb on + strand at 3685.749 kb on + strand at 3685.749 kb on + strand at 3685.749 kb on + strand at 3685.749 kb on + strand at 3685.749 kb on + strand at 3685.749 kb on + strand at 3685.749 kb on + strand at 3685.750 kb on - strand at 3685.750 kb on - strand at 3685.750 kb on - strand at 3685.758 kb on + strand at 3685.758 kb on + strand at 3685.758 kb on + strand at 3685.759 kb on - strand at 3685.811 kb on + strand at 3685.811 kb on + strand at 3685.811 kb on + strand at 3685.811 kb on + strand at 3685.811 kb on + strand at 3685.823 kb on - strand at 3685.823 kb on - strand at 3685.823 kb on - strand at 3685.823 kb on - strand at 3685.823 kb on - strand at 3685.823 kb on - strand at 3685.823 kb on - strand at 3685.823 kb on - strand at 3685.883 kb on + strand at 3685.883 kb on + strand at 3685.883 kb on + strand at 3685.883 kb on + strand at 3685.884 kb on - strand at 3685.884 kb on - strand at 3685.884 kb on - strand at 3685.884 kb on - strand at 3685.884 kb on - strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3685.916 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.611 kb on - strand at 3687.611 kb on - strand at 3687.611 kb on - strand at 3687.611 kb on - strand at 3687.796 kb on + strand, within OKGIIK_16810 at 3687.804 kb on + strand, within OKGIIK_16810 at 3687.915 kb on + strand at 3687.976 kb on - strand at 3688.072 kb on + strand at 3688.072 kb on + strand at 3688.073 kb on - strand at 3688.073 kb on - strand at 3688.073 kb on - strand at 3688.079 kb on + strand at 3688.080 kb on - strand at 3688.080 kb on - strand at 3688.080 kb on - strand at 3688.080 kb on - strand at 3688.196 kb on + strand, within OKGIIK_16815 at 3688.196 kb on + strand, within OKGIIK_16815 at 3688.196 kb on + strand, within OKGIIK_16815 at 3688.197 kb on - strand, within OKGIIK_16815 at 3688.227 kb on + strand, within OKGIIK_16815 at 3688.227 kb on + strand, within OKGIIK_16815
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,685,056 + +0.2 3,685,056 + +2.2 3,685,056 + -0.2 3,685,056 + -0.6 3,685,056 + -0.2 3,685,057 - -0.4 3,685,057 - -0.6 3,685,081 - -0.9 3,685,134 + OKGIIK_16800 0.11 +2.0 3,685,135 - OKGIIK_16800 0.11 -1.7 3,685,135 - OKGIIK_16800 0.11 -1.1 3,685,135 - OKGIIK_16800 0.11 +0.9 3,685,230 + OKGIIK_16800 0.25 -0.3 3,685,230 + OKGIIK_16800 0.25 -1.6 3,685,231 - OKGIIK_16800 0.25 +0.8 3,685,272 + OKGIIK_16800 0.31 -0.8 3,685,272 + OKGIIK_16800 0.31 +1.3 3,685,272 + OKGIIK_16800 0.31 -0.4 3,685,272 + OKGIIK_16800 0.31 -0.5 3,685,272 + OKGIIK_16800 0.31 -0.2 3,685,272 + OKGIIK_16800 0.31 -1.2 3,685,272 + OKGIIK_16800 0.31 -0.6 3,685,272 + OKGIIK_16800 0.31 +0.3 3,685,272 + OKGIIK_16800 0.31 -0.4 3,685,273 - OKGIIK_16800 0.31 -1.3 3,685,273 - OKGIIK_16800 0.31 +1.3 3,685,273 - OKGIIK_16800 0.31 -0.2 3,685,273 - OKGIIK_16800 0.31 +0.8 3,685,273 - OKGIIK_16800 0.31 +0.0 3,685,273 - OKGIIK_16800 0.31 -0.6 3,685,273 - OKGIIK_16800 0.31 -0.6 3,685,273 - OKGIIK_16800 0.31 -1.0 3,685,273 - OKGIIK_16800 0.31 +0.2 3,685,329 + OKGIIK_16800 0.39 +0.0 3,685,329 + OKGIIK_16800 0.39 -0.5 3,685,329 + OKGIIK_16800 0.39 +0.0 3,685,329 + OKGIIK_16800 0.39 +0.6 3,685,330 - OKGIIK_16800 0.39 -0.1 3,685,330 - OKGIIK_16800 0.39 -0.6 3,685,330 - OKGIIK_16800 0.39 +1.2 3,685,338 + OKGIIK_16800 0.40 +0.6 3,685,338 + OKGIIK_16800 0.40 +0.4 3,685,338 + OKGIIK_16800 0.40 +1.8 3,685,339 - OKGIIK_16800 0.40 +0.1 3,685,339 - OKGIIK_16800 0.40 -1.4 3,685,404 + OKGIIK_16800 0.49 +0.2 3,685,404 + OKGIIK_16800 0.49 -0.7 3,685,404 + OKGIIK_16800 0.49 -0.0 3,685,404 + OKGIIK_16800 0.49 -1.5 3,685,404 + OKGIIK_16800 0.49 -0.1 3,685,404 + OKGIIK_16800 0.49 -0.6 3,685,404 + OKGIIK_16800 0.49 -1.0 3,685,404 + OKGIIK_16800 0.49 +1.4 3,685,405 - OKGIIK_16800 0.49 -1.2 3,685,405 - OKGIIK_16800 0.49 +0.2 3,685,405 - OKGIIK_16800 0.49 +2.2 3,685,405 - OKGIIK_16800 0.49 +0.0 3,685,405 - OKGIIK_16800 0.49 +0.5 3,685,407 + OKGIIK_16800 0.50 -1.4 3,685,407 + OKGIIK_16800 0.50 +1.1 3,685,407 + OKGIIK_16800 0.50 -0.5 3,685,407 + OKGIIK_16800 0.50 -0.3 3,685,407 + OKGIIK_16800 0.50 +0.3 3,685,407 + OKGIIK_16800 0.50 -0.9 3,685,408 - OKGIIK_16800 0.50 +0.1 3,685,408 - OKGIIK_16800 0.50 -0.4 3,685,408 - OKGIIK_16800 0.50 -0.3 3,685,408 - OKGIIK_16800 0.50 -0.4 3,685,408 - OKGIIK_16800 0.50 -0.5 3,685,488 + OKGIIK_16800 0.61 -1.2 3,685,488 + OKGIIK_16800 0.61 -1.2 3,685,488 + OKGIIK_16800 0.61 +1.0 3,685,488 + OKGIIK_16800 0.61 +0.8 3,685,488 + OKGIIK_16800 0.61 -2.9 3,685,489 - OKGIIK_16800 0.61 -0.2 3,685,489 - OKGIIK_16800 0.61 -0.9 3,685,539 + OKGIIK_16800 0.68 -0.2 3,685,539 + OKGIIK_16800 0.68 +0.4 3,685,539 + OKGIIK_16800 0.68 +0.6 3,685,539 + OKGIIK_16800 0.68 -0.9 3,685,540 - OKGIIK_16800 0.68 -0.0 3,685,540 - OKGIIK_16800 0.68 +0.6 3,685,540 - OKGIIK_16800 0.68 +1.2 3,685,540 - OKGIIK_16800 0.68 -1.4 3,685,540 - OKGIIK_16800 0.68 -0.3 3,685,540 - OKGIIK_16800 0.68 -0.5 3,685,540 - OKGIIK_16800 0.68 -0.1 3,685,540 - OKGIIK_16800 0.68 -0.9 3,685,540 - OKGIIK_16800 0.68 +0.9 3,685,540 - OKGIIK_16800 0.68 +0.4 3,685,635 + OKGIIK_16800 0.82 -0.3 3,685,680 + OKGIIK_16800 0.88 -0.7 3,685,680 + OKGIIK_16800 0.88 -1.5 3,685,680 + OKGIIK_16800 0.88 -3.1 3,685,680 + OKGIIK_16800 0.88 +0.7 3,685,680 + OKGIIK_16800 0.88 +1.7 3,685,681 - OKGIIK_16800 0.88 -2.3 3,685,681 - OKGIIK_16800 0.88 -0.6 3,685,681 - OKGIIK_16800 0.88 +0.4 3,685,681 - OKGIIK_16800 0.88 +0.7 3,685,681 - OKGIIK_16800 0.88 +0.7 3,685,681 - OKGIIK_16800 0.88 -1.4 3,685,681 - OKGIIK_16800 0.88 -0.6 3,685,681 - OKGIIK_16800 0.88 -1.9 3,685,681 - OKGIIK_16800 0.88 +0.1 3,685,681 - OKGIIK_16800 0.88 -2.9 3,685,746 + -0.5 3,685,746 + -0.9 3,685,746 + -1.0 3,685,746 + +0.4 3,685,746 + +0.8 3,685,747 - +0.2 3,685,749 + -0.2 3,685,749 + -0.5 3,685,749 + +1.4 3,685,749 + -0.2 3,685,749 + -0.3 3,685,749 + +0.8 3,685,749 + -0.2 3,685,749 + -0.9 3,685,750 - -2.5 3,685,750 - +0.7 3,685,750 - -0.2 3,685,758 + -2.0 3,685,758 + +0.0 3,685,758 + -1.2 3,685,759 - -0.2 3,685,811 + +0.1 3,685,811 + -0.7 3,685,811 + -1.8 3,685,811 + -1.4 3,685,811 + +0.2 3,685,823 - -0.9 3,685,823 - +0.3 3,685,823 - -1.2 3,685,823 - -1.3 3,685,823 - +0.5 3,685,823 - -1.4 3,685,823 - -1.0 3,685,823 - -0.5 3,685,883 + -0.1 3,685,883 + +0.7 3,685,883 + -1.7 3,685,883 + -2.0 3,685,884 - -0.4 3,685,884 - -0.2 3,685,884 - +0.6 3,685,884 - -0.5 3,685,884 - -0.6 3,685,916 + +0.3 3,685,916 + +0.6 3,685,916 + -0.1 3,685,916 + -0.6 3,685,916 + -0.9 3,685,916 + +0.1 3,685,916 + +1.2 3,685,916 + -0.2 3,685,916 + +0.3 3,685,916 + -0.5 3,685,916 + -0.6 3,687,574 + -0.0 3,687,574 + +0.7 3,687,574 + -0.2 3,687,574 + -2.0 3,687,574 + -0.6 3,687,574 + +1.7 3,687,574 + -0.3 3,687,574 + +0.4 3,687,574 + +0.1 3,687,574 + -0.2 3,687,574 + -0.4 3,687,574 + +0.0 3,687,574 + +0.7 3,687,574 + -1.2 3,687,575 - +0.6 3,687,575 - -0.6 3,687,575 - -1.7 3,687,575 - -1.2 3,687,575 - -0.8 3,687,575 - +1.3 3,687,575 - -0.3 3,687,575 - -0.6 3,687,575 - +0.4 3,687,575 - +0.7 3,687,575 - -1.6 3,687,575 - +0.7 3,687,610 + -0.6 3,687,610 + -0.9 3,687,610 + +0.6 3,687,610 + -0.9 3,687,610 + +0.1 3,687,610 + -0.4 3,687,610 + -0.6 3,687,611 - -0.4 3,687,611 - -0.0 3,687,611 - -0.9 3,687,611 - -1.0 3,687,796 + OKGIIK_16810 0.58 +0.3 3,687,804 + OKGIIK_16810 0.60 -0.9 3,687,915 + +0.6 3,687,976 - +0.4 3,688,072 + -1.2 3,688,072 + +0.9 3,688,073 - -0.3 3,688,073 - -1.2 3,688,073 - -0.2 3,688,079 + +0.1 3,688,080 - -1.5 3,688,080 - +0.4 3,688,080 - +0.3 3,688,080 - -1.2 3,688,196 + OKGIIK_16815 0.14 -0.0 3,688,196 + OKGIIK_16815 0.14 +0.7 3,688,196 + OKGIIK_16815 0.14 -1.6 3,688,197 - OKGIIK_16815 0.14 -0.0 3,688,227 + OKGIIK_16815 0.17 +1.7 3,688,227 + OKGIIK_16815 0.17 -0.2
Or see this region's nucleotide sequence