Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16805

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_16795 and OKGIIK_16800 are separated by 6 nucleotidesOKGIIK_16800 and purH are separated by 163 nucleotidespurH and OKGIIK_16810 are separated by 69 nucleotidesOKGIIK_16810 and OKGIIK_16815 are separated by 145 nucleotides OKGIIK_16795: OKGIIK_16795 - EamA-like transporter family, at 3,684,617 to 3,685,048 _16795 OKGIIK_16800: OKGIIK_16800 - Glutathione S-transferase, at 3,685,055 to 3,685,765 _16800 OKGIIK_16805: purH - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 3,685,929 to 3,687,539 purH OKGIIK_16810: OKGIIK_16810 - Putative Fis-like DNA-binding protein, at 3,687,609 to 3,687,932 _16810 OKGIIK_16815: OKGIIK_16815 - DUF3426 domain-containing protein, at 3,688,078 to 3,688,938 _16815 Position (kb) 3685 3686 3687 3688Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3685.056 kb on + strandat 3685.056 kb on + strandat 3685.056 kb on + strandat 3685.056 kb on + strandat 3685.056 kb on + strandat 3685.057 kb on - strandat 3685.057 kb on - strandat 3685.081 kb on - strandat 3685.134 kb on + strand, within OKGIIK_16800at 3685.135 kb on - strand, within OKGIIK_16800at 3685.135 kb on - strand, within OKGIIK_16800at 3685.135 kb on - strand, within OKGIIK_16800at 3685.230 kb on + strand, within OKGIIK_16800at 3685.230 kb on + strand, within OKGIIK_16800at 3685.231 kb on - strand, within OKGIIK_16800at 3685.272 kb on + strand, within OKGIIK_16800at 3685.272 kb on + strand, within OKGIIK_16800at 3685.272 kb on + strand, within OKGIIK_16800at 3685.272 kb on + strand, within OKGIIK_16800at 3685.272 kb on + strand, within OKGIIK_16800at 3685.272 kb on + strand, within OKGIIK_16800at 3685.272 kb on + strand, within OKGIIK_16800at 3685.272 kb on + strand, within OKGIIK_16800at 3685.272 kb on + strand, within OKGIIK_16800at 3685.273 kb on - strand, within OKGIIK_16800at 3685.273 kb on - strand, within OKGIIK_16800at 3685.273 kb on - strand, within OKGIIK_16800at 3685.273 kb on - strand, within OKGIIK_16800at 3685.273 kb on - strand, within OKGIIK_16800at 3685.273 kb on - strand, within OKGIIK_16800at 3685.273 kb on - strand, within OKGIIK_16800at 3685.273 kb on - strand, within OKGIIK_16800at 3685.273 kb on - strand, within OKGIIK_16800at 3685.329 kb on + strand, within OKGIIK_16800at 3685.329 kb on + strand, within OKGIIK_16800at 3685.329 kb on + strand, within OKGIIK_16800at 3685.329 kb on + strand, within OKGIIK_16800at 3685.330 kb on - strand, within OKGIIK_16800at 3685.330 kb on - strand, within OKGIIK_16800at 3685.330 kb on - strand, within OKGIIK_16800at 3685.338 kb on + strand, within OKGIIK_16800at 3685.338 kb on + strand, within OKGIIK_16800at 3685.338 kb on + strand, within OKGIIK_16800at 3685.339 kb on - strand, within OKGIIK_16800at 3685.339 kb on - strand, within OKGIIK_16800at 3685.404 kb on + strand, within OKGIIK_16800at 3685.404 kb on + strand, within OKGIIK_16800at 3685.404 kb on + strand, within OKGIIK_16800at 3685.404 kb on + strand, within OKGIIK_16800at 3685.404 kb on + strand, within OKGIIK_16800at 3685.404 kb on + strand, within OKGIIK_16800at 3685.404 kb on + strand, within OKGIIK_16800at 3685.404 kb on + strand, within OKGIIK_16800at 3685.405 kb on - strand, within OKGIIK_16800at 3685.405 kb on - strand, within OKGIIK_16800at 3685.405 kb on - strand, within OKGIIK_16800at 3685.405 kb on - strand, within OKGIIK_16800at 3685.405 kb on - strand, within OKGIIK_16800at 3685.407 kb on + strand, within OKGIIK_16800at 3685.407 kb on + strand, within OKGIIK_16800at 3685.407 kb on + strand, within OKGIIK_16800at 3685.407 kb on + strand, within OKGIIK_16800at 3685.407 kb on + strand, within OKGIIK_16800at 3685.407 kb on + strand, within OKGIIK_16800at 3685.408 kb on - strand, within OKGIIK_16800at 3685.408 kb on - strand, within OKGIIK_16800at 3685.408 kb on - strand, within OKGIIK_16800at 3685.408 kb on - strand, within OKGIIK_16800at 3685.408 kb on - strand, within OKGIIK_16800at 3685.488 kb on + strand, within OKGIIK_16800at 3685.488 kb on + strand, within OKGIIK_16800at 3685.488 kb on + strand, within OKGIIK_16800at 3685.488 kb on + strand, within OKGIIK_16800at 3685.488 kb on + strand, within OKGIIK_16800at 3685.489 kb on - strand, within OKGIIK_16800at 3685.489 kb on - strand, within OKGIIK_16800at 3685.539 kb on + strand, within OKGIIK_16800at 3685.539 kb on + strand, within OKGIIK_16800at 3685.539 kb on + strand, within OKGIIK_16800at 3685.539 kb on + strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.540 kb on - strand, within OKGIIK_16800at 3685.635 kb on + strand, within OKGIIK_16800at 3685.680 kb on + strand, within OKGIIK_16800at 3685.680 kb on + strand, within OKGIIK_16800at 3685.680 kb on + strand, within OKGIIK_16800at 3685.680 kb on + strand, within OKGIIK_16800at 3685.680 kb on + strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.681 kb on - strand, within OKGIIK_16800at 3685.746 kb on + strandat 3685.746 kb on + strandat 3685.746 kb on + strandat 3685.746 kb on + strandat 3685.746 kb on + strandat 3685.747 kb on - strandat 3685.749 kb on + strandat 3685.749 kb on + strandat 3685.749 kb on + strandat 3685.749 kb on + strandat 3685.749 kb on + strandat 3685.749 kb on + strandat 3685.749 kb on + strandat 3685.749 kb on + strandat 3685.750 kb on - strandat 3685.750 kb on - strandat 3685.750 kb on - strandat 3685.758 kb on + strandat 3685.758 kb on + strandat 3685.758 kb on + strandat 3685.759 kb on - strandat 3685.811 kb on + strandat 3685.811 kb on + strandat 3685.811 kb on + strandat 3685.811 kb on + strandat 3685.811 kb on + strandat 3685.823 kb on - strandat 3685.823 kb on - strandat 3685.823 kb on - strandat 3685.823 kb on - strandat 3685.823 kb on - strandat 3685.823 kb on - strandat 3685.823 kb on - strandat 3685.823 kb on - strandat 3685.883 kb on + strandat 3685.883 kb on + strandat 3685.883 kb on + strandat 3685.883 kb on + strandat 3685.884 kb on - strandat 3685.884 kb on - strandat 3685.884 kb on - strandat 3685.884 kb on - strandat 3685.884 kb on - strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3685.916 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.611 kb on - strandat 3687.611 kb on - strandat 3687.611 kb on - strandat 3687.611 kb on - strandat 3687.796 kb on + strand, within OKGIIK_16810at 3687.804 kb on + strand, within OKGIIK_16810at 3687.915 kb on + strandat 3687.976 kb on - strandat 3688.072 kb on + strandat 3688.072 kb on + strandat 3688.073 kb on - strandat 3688.073 kb on - strandat 3688.073 kb on - strandat 3688.079 kb on + strandat 3688.080 kb on - strandat 3688.080 kb on - strandat 3688.080 kb on - strandat 3688.080 kb on - strandat 3688.196 kb on + strand, within OKGIIK_16815at 3688.196 kb on + strand, within OKGIIK_16815at 3688.196 kb on + strand, within OKGIIK_16815at 3688.197 kb on - strand, within OKGIIK_16815at 3688.227 kb on + strand, within OKGIIK_16815at 3688.227 kb on + strand, within OKGIIK_16815

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,685,056 + +0.2
3,685,056 + +2.2
3,685,056 + -0.2
3,685,056 + -0.6
3,685,056 + -0.2
3,685,057 - -0.4
3,685,057 - -0.6
3,685,081 - -0.9
3,685,134 + OKGIIK_16800 0.11 +2.0
3,685,135 - OKGIIK_16800 0.11 -1.7
3,685,135 - OKGIIK_16800 0.11 -1.1
3,685,135 - OKGIIK_16800 0.11 +0.9
3,685,230 + OKGIIK_16800 0.25 -0.3
3,685,230 + OKGIIK_16800 0.25 -1.6
3,685,231 - OKGIIK_16800 0.25 +0.8
3,685,272 + OKGIIK_16800 0.31 -0.8
3,685,272 + OKGIIK_16800 0.31 +1.3
3,685,272 + OKGIIK_16800 0.31 -0.4
3,685,272 + OKGIIK_16800 0.31 -0.5
3,685,272 + OKGIIK_16800 0.31 -0.2
3,685,272 + OKGIIK_16800 0.31 -1.2
3,685,272 + OKGIIK_16800 0.31 -0.6
3,685,272 + OKGIIK_16800 0.31 +0.3
3,685,272 + OKGIIK_16800 0.31 -0.4
3,685,273 - OKGIIK_16800 0.31 -1.3
3,685,273 - OKGIIK_16800 0.31 +1.3
3,685,273 - OKGIIK_16800 0.31 -0.2
3,685,273 - OKGIIK_16800 0.31 +0.8
3,685,273 - OKGIIK_16800 0.31 +0.0
3,685,273 - OKGIIK_16800 0.31 -0.6
3,685,273 - OKGIIK_16800 0.31 -0.6
3,685,273 - OKGIIK_16800 0.31 -1.0
3,685,273 - OKGIIK_16800 0.31 +0.2
3,685,329 + OKGIIK_16800 0.39 +0.0
3,685,329 + OKGIIK_16800 0.39 -0.5
3,685,329 + OKGIIK_16800 0.39 +0.0
3,685,329 + OKGIIK_16800 0.39 +0.6
3,685,330 - OKGIIK_16800 0.39 -0.1
3,685,330 - OKGIIK_16800 0.39 -0.6
3,685,330 - OKGIIK_16800 0.39 +1.2
3,685,338 + OKGIIK_16800 0.40 +0.6
3,685,338 + OKGIIK_16800 0.40 +0.4
3,685,338 + OKGIIK_16800 0.40 +1.8
3,685,339 - OKGIIK_16800 0.40 +0.1
3,685,339 - OKGIIK_16800 0.40 -1.4
3,685,404 + OKGIIK_16800 0.49 +0.2
3,685,404 + OKGIIK_16800 0.49 -0.7
3,685,404 + OKGIIK_16800 0.49 -0.0
3,685,404 + OKGIIK_16800 0.49 -1.5
3,685,404 + OKGIIK_16800 0.49 -0.1
3,685,404 + OKGIIK_16800 0.49 -0.6
3,685,404 + OKGIIK_16800 0.49 -1.0
3,685,404 + OKGIIK_16800 0.49 +1.4
3,685,405 - OKGIIK_16800 0.49 -1.2
3,685,405 - OKGIIK_16800 0.49 +0.2
3,685,405 - OKGIIK_16800 0.49 +2.2
3,685,405 - OKGIIK_16800 0.49 +0.0
3,685,405 - OKGIIK_16800 0.49 +0.5
3,685,407 + OKGIIK_16800 0.50 -1.4
3,685,407 + OKGIIK_16800 0.50 +1.1
3,685,407 + OKGIIK_16800 0.50 -0.5
3,685,407 + OKGIIK_16800 0.50 -0.3
3,685,407 + OKGIIK_16800 0.50 +0.3
3,685,407 + OKGIIK_16800 0.50 -0.9
3,685,408 - OKGIIK_16800 0.50 +0.1
3,685,408 - OKGIIK_16800 0.50 -0.4
3,685,408 - OKGIIK_16800 0.50 -0.3
3,685,408 - OKGIIK_16800 0.50 -0.4
3,685,408 - OKGIIK_16800 0.50 -0.5
3,685,488 + OKGIIK_16800 0.61 -1.2
3,685,488 + OKGIIK_16800 0.61 -1.2
3,685,488 + OKGIIK_16800 0.61 +1.0
3,685,488 + OKGIIK_16800 0.61 +0.8
3,685,488 + OKGIIK_16800 0.61 -2.9
3,685,489 - OKGIIK_16800 0.61 -0.2
3,685,489 - OKGIIK_16800 0.61 -0.9
3,685,539 + OKGIIK_16800 0.68 -0.2
3,685,539 + OKGIIK_16800 0.68 +0.4
3,685,539 + OKGIIK_16800 0.68 +0.6
3,685,539 + OKGIIK_16800 0.68 -0.9
3,685,540 - OKGIIK_16800 0.68 -0.0
3,685,540 - OKGIIK_16800 0.68 +0.6
3,685,540 - OKGIIK_16800 0.68 +1.2
3,685,540 - OKGIIK_16800 0.68 -1.4
3,685,540 - OKGIIK_16800 0.68 -0.3
3,685,540 - OKGIIK_16800 0.68 -0.5
3,685,540 - OKGIIK_16800 0.68 -0.1
3,685,540 - OKGIIK_16800 0.68 -0.9
3,685,540 - OKGIIK_16800 0.68 +0.9
3,685,540 - OKGIIK_16800 0.68 +0.4
3,685,635 + OKGIIK_16800 0.82 -0.3
3,685,680 + OKGIIK_16800 0.88 -0.7
3,685,680 + OKGIIK_16800 0.88 -1.5
3,685,680 + OKGIIK_16800 0.88 -3.1
3,685,680 + OKGIIK_16800 0.88 +0.7
3,685,680 + OKGIIK_16800 0.88 +1.7
3,685,681 - OKGIIK_16800 0.88 -2.3
3,685,681 - OKGIIK_16800 0.88 -0.6
3,685,681 - OKGIIK_16800 0.88 +0.4
3,685,681 - OKGIIK_16800 0.88 +0.7
3,685,681 - OKGIIK_16800 0.88 +0.7
3,685,681 - OKGIIK_16800 0.88 -1.4
3,685,681 - OKGIIK_16800 0.88 -0.6
3,685,681 - OKGIIK_16800 0.88 -1.9
3,685,681 - OKGIIK_16800 0.88 +0.1
3,685,681 - OKGIIK_16800 0.88 -2.9
3,685,746 + -0.5
3,685,746 + -0.9
3,685,746 + -1.0
3,685,746 + +0.4
3,685,746 + +0.8
3,685,747 - +0.2
3,685,749 + -0.2
3,685,749 + -0.5
3,685,749 + +1.4
3,685,749 + -0.2
3,685,749 + -0.3
3,685,749 + +0.8
3,685,749 + -0.2
3,685,749 + -0.9
3,685,750 - -2.5
3,685,750 - +0.7
3,685,750 - -0.2
3,685,758 + -2.0
3,685,758 + +0.0
3,685,758 + -1.2
3,685,759 - -0.2
3,685,811 + +0.1
3,685,811 + -0.7
3,685,811 + -1.8
3,685,811 + -1.4
3,685,811 + +0.2
3,685,823 - -0.9
3,685,823 - +0.3
3,685,823 - -1.2
3,685,823 - -1.3
3,685,823 - +0.5
3,685,823 - -1.4
3,685,823 - -1.0
3,685,823 - -0.5
3,685,883 + -0.1
3,685,883 + +0.7
3,685,883 + -1.7
3,685,883 + -2.0
3,685,884 - -0.4
3,685,884 - -0.2
3,685,884 - +0.6
3,685,884 - -0.5
3,685,884 - -0.6
3,685,916 + +0.3
3,685,916 + +0.6
3,685,916 + -0.1
3,685,916 + -0.6
3,685,916 + -0.9
3,685,916 + +0.1
3,685,916 + +1.2
3,685,916 + -0.2
3,685,916 + +0.3
3,685,916 + -0.5
3,685,916 + -0.6
3,687,574 + -0.0
3,687,574 + +0.7
3,687,574 + -0.2
3,687,574 + -2.0
3,687,574 + -0.6
3,687,574 + +1.7
3,687,574 + -0.3
3,687,574 + +0.4
3,687,574 + +0.1
3,687,574 + -0.2
3,687,574 + -0.4
3,687,574 + +0.0
3,687,574 + +0.7
3,687,574 + -1.2
3,687,575 - +0.6
3,687,575 - -0.6
3,687,575 - -1.7
3,687,575 - -1.2
3,687,575 - -0.8
3,687,575 - +1.3
3,687,575 - -0.3
3,687,575 - -0.6
3,687,575 - +0.4
3,687,575 - +0.7
3,687,575 - -1.6
3,687,575 - +0.7
3,687,610 + -0.6
3,687,610 + -0.9
3,687,610 + +0.6
3,687,610 + -0.9
3,687,610 + +0.1
3,687,610 + -0.4
3,687,610 + -0.6
3,687,611 - -0.4
3,687,611 - -0.0
3,687,611 - -0.9
3,687,611 - -1.0
3,687,796 + OKGIIK_16810 0.58 +0.3
3,687,804 + OKGIIK_16810 0.60 -0.9
3,687,915 + +0.6
3,687,976 - +0.4
3,688,072 + -1.2
3,688,072 + +0.9
3,688,073 - -0.3
3,688,073 - -1.2
3,688,073 - -0.2
3,688,079 + +0.1
3,688,080 - -1.5
3,688,080 - +0.4
3,688,080 - +0.3
3,688,080 - -1.2
3,688,196 + OKGIIK_16815 0.14 -0.0
3,688,196 + OKGIIK_16815 0.14 +0.7
3,688,196 + OKGIIK_16815 0.14 -1.6
3,688,197 - OKGIIK_16815 0.14 -0.0
3,688,227 + OKGIIK_16815 0.17 +1.7
3,688,227 + OKGIIK_16815 0.17 -0.2

Or see this region's nucleotide sequence