Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_15845 and bfr are separated by 113 nucleotides bfr and OKGIIK_15855 are separated by 130 nucleotides OKGIIK_15855 and OKGIIK_15860 are separated by 56 nucleotides OKGIIK_15860 and Met_trna are separated by 178 nucleotides
OKGIIK_15845: OKGIIK_15845 - DUF6776 domain-containing protein, at 3,462,924 to 3,463,679
_15845
OKGIIK_15850: bfr - bacterioferritin, at 3,463,793 to 3,464,263
bfr
OKGIIK_15855: OKGIIK_15855 - (2Fe-2S)-binding protein, at 3,464,394 to 3,464,600
_15855
OKGIIK_15860: OKGIIK_15860 - RNA pyrophosphohydrolase, at 3,464,657 to 3,465,217
_15860
OKGIIK_15865: Met_trna - tRNA-Met, at 3,465,396 to 3,465,472
_trna
Position (kb)
3464
3465 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.707 kb on + strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.708 kb on - strand at 3463.709 kb on + strand at 3463.709 kb on + strand at 3463.709 kb on + strand at 3463.709 kb on + strand at 3463.709 kb on + strand at 3463.710 kb on - strand at 3463.710 kb on - strand at 3463.710 kb on - strand at 3463.710 kb on - strand at 3463.710 kb on - strand at 3463.710 kb on - strand at 3463.818 kb on + strand at 3463.818 kb on + strand at 3463.923 kb on + strand, within bfr at 3463.923 kb on + strand, within bfr at 3463.923 kb on + strand, within bfr at 3463.924 kb on - strand, within bfr at 3463.924 kb on - strand, within bfr at 3463.924 kb on - strand, within bfr at 3463.924 kb on - strand, within bfr at 3463.924 kb on - strand, within bfr at 3463.944 kb on + strand, within bfr at 3463.944 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.130 kb on + strand, within bfr at 3464.131 kb on - strand, within bfr at 3464.131 kb on - strand, within bfr at 3464.131 kb on - strand, within bfr at 3464.131 kb on - strand, within bfr at 3464.131 kb on - strand, within bfr at 3464.131 kb on - strand, within bfr at 3464.131 kb on - strand, within bfr at 3464.155 kb on - strand, within bfr at 3464.190 kb on + strand, within bfr at 3464.190 kb on + strand, within bfr at 3464.190 kb on + strand, within bfr at 3464.190 kb on + strand, within bfr at 3464.190 kb on + strand, within bfr at 3464.191 kb on - strand, within bfr at 3464.191 kb on - strand, within bfr at 3464.191 kb on - strand, within bfr at 3464.191 kb on - strand, within bfr at 3464.191 kb on - strand, within bfr at 3464.217 kb on + strand at 3464.217 kb on + strand at 3464.217 kb on + strand at 3464.217 kb on + strand at 3464.217 kb on + strand at 3464.217 kb on + strand at 3464.217 kb on + strand at 3464.218 kb on - strand at 3464.218 kb on - strand at 3464.218 kb on - strand at 3464.218 kb on - strand at 3464.218 kb on - strand at 3464.218 kb on - strand at 3464.218 kb on - strand at 3464.218 kb on - strand at 3464.218 kb on - strand at 3464.218 kb on - strand at 3464.295 kb on + strand at 3464.295 kb on + strand at 3464.295 kb on + strand at 3464.296 kb on - strand at 3464.296 kb on - strand at 3464.296 kb on - strand at 3464.296 kb on - strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.297 kb on + strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.298 kb on - strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.587 kb on + strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.588 kb on - strand at 3464.720 kb on + strand, within OKGIIK_15860 at 3464.720 kb on + strand, within OKGIIK_15860 at 3464.721 kb on - strand, within OKGIIK_15860 at 3464.721 kb on - strand, within OKGIIK_15860 at 3464.721 kb on - strand, within OKGIIK_15860 at 3464.721 kb on - strand, within OKGIIK_15860 at 3464.721 kb on - strand, within OKGIIK_15860 at 3464.753 kb on + strand, within OKGIIK_15860 at 3464.753 kb on + strand, within OKGIIK_15860 at 3464.754 kb on - strand, within OKGIIK_15860 at 3464.787 kb on + strand, within OKGIIK_15860 at 3464.787 kb on + strand, within OKGIIK_15860 at 3464.787 kb on + strand, within OKGIIK_15860 at 3464.787 kb on + strand, within OKGIIK_15860 at 3464.787 kb on + strand, within OKGIIK_15860 at 3464.788 kb on - strand, within OKGIIK_15860 at 3464.788 kb on - strand, within OKGIIK_15860 at 3464.788 kb on - strand, within OKGIIK_15860 at 3464.788 kb on - strand, within OKGIIK_15860 at 3464.788 kb on - strand, within OKGIIK_15860 at 3464.788 kb on - strand, within OKGIIK_15860 at 3464.970 kb on + strand, within OKGIIK_15860 at 3464.970 kb on + strand, within OKGIIK_15860 at 3464.970 kb on + strand, within OKGIIK_15860 at 3464.970 kb on + strand, within OKGIIK_15860 at 3464.970 kb on + strand, within OKGIIK_15860 at 3464.970 kb on + strand, within OKGIIK_15860 at 3464.971 kb on - strand, within OKGIIK_15860 at 3464.971 kb on - strand, within OKGIIK_15860 at 3464.971 kb on - strand, within OKGIIK_15860 at 3464.971 kb on - strand, within OKGIIK_15860 at 3465.066 kb on + strand, within OKGIIK_15860 at 3465.066 kb on + strand, within OKGIIK_15860 at 3465.067 kb on - strand, within OKGIIK_15860 at 3465.067 kb on - strand, within OKGIIK_15860 at 3465.067 kb on - strand, within OKGIIK_15860 at 3465.067 kb on - strand, within OKGIIK_15860 at 3465.067 kb on - strand, within OKGIIK_15860 at 3465.067 kb on - strand, within OKGIIK_15860 at 3465.067 kb on - strand, within OKGIIK_15860 at 3465.094 kb on + strand, within OKGIIK_15860 at 3465.094 kb on + strand, within OKGIIK_15860 at 3465.094 kb on + strand, within OKGIIK_15860 at 3465.094 kb on + strand, within OKGIIK_15860 at 3465.094 kb on + strand, within OKGIIK_15860 at 3465.094 kb on + strand, within OKGIIK_15860 at 3465.094 kb on + strand, within OKGIIK_15860 at 3465.095 kb on - strand, within OKGIIK_15860 at 3465.095 kb on - strand, within OKGIIK_15860 at 3465.095 kb on - strand, within OKGIIK_15860 at 3465.095 kb on - strand, within OKGIIK_15860 at 3465.095 kb on - strand, within OKGIIK_15860 at 3465.095 kb on - strand, within OKGIIK_15860 at 3465.198 kb on + strand at 3465.264 kb on + strand at 3465.264 kb on + strand at 3465.264 kb on + strand at 3465.264 kb on + strand at 3465.265 kb on - strand at 3465.265 kb on - strand at 3465.265 kb on - strand at 3465.593 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,463,707 + +0.6 3,463,707 + +0.1 3,463,707 + +1.3 3,463,707 + -0.6 3,463,707 + +0.8 3,463,707 + -0.5 3,463,707 + -0.8 3,463,707 + -0.7 3,463,707 + -0.0 3,463,707 + -0.1 3,463,707 + -1.5 3,463,707 + +0.4 3,463,708 - -0.7 3,463,708 - -0.1 3,463,708 - +0.4 3,463,708 - -2.6 3,463,708 - +2.4 3,463,708 - -0.3 3,463,708 - +0.5 3,463,708 - -0.6 3,463,708 - -0.2 3,463,708 - -2.8 3,463,708 - +1.5 3,463,709 + +0.0 3,463,709 + +0.1 3,463,709 + -0.8 3,463,709 + -1.3 3,463,709 + -0.6 3,463,710 - +0.2 3,463,710 - -0.8 3,463,710 - -0.1 3,463,710 - -0.4 3,463,710 - -1.6 3,463,710 - -0.0 3,463,818 + +0.0 3,463,818 + -0.8 3,463,923 + bfr OKGIIK_15850 0.28 +2.4 3,463,923 + bfr OKGIIK_15850 0.28 +0.6 3,463,923 + bfr OKGIIK_15850 0.28 -1.0 3,463,924 - bfr OKGIIK_15850 0.28 +0.4 3,463,924 - bfr OKGIIK_15850 0.28 -0.3 3,463,924 - bfr OKGIIK_15850 0.28 +1.6 3,463,924 - bfr OKGIIK_15850 0.28 -0.1 3,463,924 - bfr OKGIIK_15850 0.28 -0.4 3,463,944 + bfr OKGIIK_15850 0.32 +0.0 3,463,944 + bfr OKGIIK_15850 0.32 +0.0 3,464,130 + bfr OKGIIK_15850 0.72 -0.6 3,464,130 + bfr OKGIIK_15850 0.72 +1.5 3,464,130 + bfr OKGIIK_15850 0.72 +1.0 3,464,130 + bfr OKGIIK_15850 0.72 -1.5 3,464,130 + bfr OKGIIK_15850 0.72 -0.6 3,464,130 + bfr OKGIIK_15850 0.72 -0.2 3,464,130 + bfr OKGIIK_15850 0.72 +0.4 3,464,130 + bfr OKGIIK_15850 0.72 -1.2 3,464,130 + bfr OKGIIK_15850 0.72 -0.6 3,464,130 + bfr OKGIIK_15850 0.72 -2.6 3,464,130 + bfr OKGIIK_15850 0.72 -0.3 3,464,130 + bfr OKGIIK_15850 0.72 -0.2 3,464,130 + bfr OKGIIK_15850 0.72 -0.1 3,464,131 - bfr OKGIIK_15850 0.72 -0.9 3,464,131 - bfr OKGIIK_15850 0.72 -0.5 3,464,131 - bfr OKGIIK_15850 0.72 +0.1 3,464,131 - bfr OKGIIK_15850 0.72 +0.0 3,464,131 - bfr OKGIIK_15850 0.72 +0.4 3,464,131 - bfr OKGIIK_15850 0.72 -1.2 3,464,131 - bfr OKGIIK_15850 0.72 -1.0 3,464,155 - bfr OKGIIK_15850 0.77 -1.1 3,464,190 + bfr OKGIIK_15850 0.84 -0.2 3,464,190 + bfr OKGIIK_15850 0.84 +0.5 3,464,190 + bfr OKGIIK_15850 0.84 +0.3 3,464,190 + bfr OKGIIK_15850 0.84 -2.8 3,464,190 + bfr OKGIIK_15850 0.84 -0.8 3,464,191 - bfr OKGIIK_15850 0.85 -0.5 3,464,191 - bfr OKGIIK_15850 0.85 -0.6 3,464,191 - bfr OKGIIK_15850 0.85 +1.1 3,464,191 - bfr OKGIIK_15850 0.85 +0.4 3,464,191 - bfr OKGIIK_15850 0.85 -2.1 3,464,217 + +0.9 3,464,217 + +0.8 3,464,217 + +0.4 3,464,217 + -0.1 3,464,217 + +0.9 3,464,217 + +1.1 3,464,217 + -0.2 3,464,218 - -0.4 3,464,218 - -0.5 3,464,218 - +0.6 3,464,218 - -0.4 3,464,218 - -2.0 3,464,218 - +0.4 3,464,218 - +1.2 3,464,218 - -1.1 3,464,218 - -1.5 3,464,218 - -0.5 3,464,295 + +0.4 3,464,295 + -0.8 3,464,295 + +1.0 3,464,296 - +0.8 3,464,296 - -0.6 3,464,296 - +0.4 3,464,296 - +0.2 3,464,297 + +0.2 3,464,297 + +0.1 3,464,297 + +0.5 3,464,297 + -0.8 3,464,297 + -0.8 3,464,297 + -0.0 3,464,297 + +0.1 3,464,297 + -0.5 3,464,297 + -0.6 3,464,297 + +1.2 3,464,297 + -1.3 3,464,297 + -1.5 3,464,297 + -0.8 3,464,297 + -0.7 3,464,297 + -0.0 3,464,297 + +0.8 3,464,297 + -0.2 3,464,297 + -2.0 3,464,297 + -0.1 3,464,298 - +0.1 3,464,298 - -0.3 3,464,298 - -0.2 3,464,298 - -1.8 3,464,298 - +0.6 3,464,298 - -0.3 3,464,298 - -1.8 3,464,298 - +0.0 3,464,298 - -1.0 3,464,298 - +1.0 3,464,298 - -0.1 3,464,298 - -1.2 3,464,298 - -0.6 3,464,298 - -0.1 3,464,587 + +0.0 3,464,587 + +0.4 3,464,587 + -1.2 3,464,587 + -0.6 3,464,587 + -0.2 3,464,587 + -0.6 3,464,587 + +0.6 3,464,587 + +0.4 3,464,587 + +0.5 3,464,587 + +0.7 3,464,587 + -0.6 3,464,587 + +0.0 3,464,587 + -0.7 3,464,587 + -0.3 3,464,587 + -1.5 3,464,587 + -0.6 3,464,587 + +0.8 3,464,587 + -0.1 3,464,587 + +1.3 3,464,587 + +0.2 3,464,587 + +0.3 3,464,587 + +0.0 3,464,587 + -1.1 3,464,587 + -2.1 3,464,587 + -0.2 3,464,587 + -1.0 3,464,587 + -1.1 3,464,587 + +0.9 3,464,587 + -1.5 3,464,587 + -0.1 3,464,587 + +0.2 3,464,587 + +0.2 3,464,588 - -1.2 3,464,588 - +0.0 3,464,588 - -1.6 3,464,588 - +1.0 3,464,588 - +0.2 3,464,588 - +0.3 3,464,588 - +0.3 3,464,588 - -0.8 3,464,588 - +0.9 3,464,588 - -1.2 3,464,588 - +0.6 3,464,588 - +0.5 3,464,588 - +0.0 3,464,588 - -0.1 3,464,588 - -1.8 3,464,588 - -0.8 3,464,588 - -2.0 3,464,588 - +1.4 3,464,588 - -0.1 3,464,588 - +1.5 3,464,588 - +0.5 3,464,588 - +1.0 3,464,588 - +0.6 3,464,588 - -0.1 3,464,588 - -1.5 3,464,588 - +1.7 3,464,588 - -0.7 3,464,588 - +0.4 3,464,588 - +0.2 3,464,588 - -1.2 3,464,588 - -0.3 3,464,588 - -1.5 3,464,588 - -0.6 3,464,588 - +0.1 3,464,588 - -1.5 3,464,588 - -0.3 3,464,588 - +0.1 3,464,588 - +0.1 3,464,588 - -1.0 3,464,588 - -1.2 3,464,588 - -1.2 3,464,588 - +0.4 3,464,720 + OKGIIK_15860 0.11 +0.2 3,464,720 + OKGIIK_15860 0.11 -0.5 3,464,721 - OKGIIK_15860 0.11 +1.4 3,464,721 - OKGIIK_15860 0.11 -1.0 3,464,721 - OKGIIK_15860 0.11 -1.8 3,464,721 - OKGIIK_15860 0.11 +1.2 3,464,721 - OKGIIK_15860 0.11 -0.9 3,464,753 + OKGIIK_15860 0.17 +0.4 3,464,753 + OKGIIK_15860 0.17 +0.5 3,464,754 - OKGIIK_15860 0.17 -0.9 3,464,787 + OKGIIK_15860 0.23 -0.1 3,464,787 + OKGIIK_15860 0.23 +1.6 3,464,787 + OKGIIK_15860 0.23 -1.6 3,464,787 + OKGIIK_15860 0.23 -1.2 3,464,787 + OKGIIK_15860 0.23 +0.4 3,464,788 - OKGIIK_15860 0.23 -0.6 3,464,788 - OKGIIK_15860 0.23 -0.6 3,464,788 - OKGIIK_15860 0.23 +0.5 3,464,788 - OKGIIK_15860 0.23 -0.3 3,464,788 - OKGIIK_15860 0.23 +0.2 3,464,788 - OKGIIK_15860 0.23 -0.6 3,464,970 + OKGIIK_15860 0.56 -1.3 3,464,970 + OKGIIK_15860 0.56 +1.4 3,464,970 + OKGIIK_15860 0.56 -1.0 3,464,970 + OKGIIK_15860 0.56 -1.2 3,464,970 + OKGIIK_15860 0.56 -1.0 3,464,970 + OKGIIK_15860 0.56 -1.5 3,464,971 - OKGIIK_15860 0.56 +0.1 3,464,971 - OKGIIK_15860 0.56 +0.9 3,464,971 - OKGIIK_15860 0.56 -1.2 3,464,971 - OKGIIK_15860 0.56 +0.1 3,465,066 + OKGIIK_15860 0.73 +0.5 3,465,066 + OKGIIK_15860 0.73 +0.8 3,465,067 - OKGIIK_15860 0.73 +0.9 3,465,067 - OKGIIK_15860 0.73 +0.4 3,465,067 - OKGIIK_15860 0.73 -0.6 3,465,067 - OKGIIK_15860 0.73 -1.2 3,465,067 - OKGIIK_15860 0.73 -0.6 3,465,067 - OKGIIK_15860 0.73 +0.5 3,465,067 - OKGIIK_15860 0.73 -0.1 3,465,094 + OKGIIK_15860 0.78 -1.0 3,465,094 + OKGIIK_15860 0.78 -1.0 3,465,094 + OKGIIK_15860 0.78 +0.9 3,465,094 + OKGIIK_15860 0.78 -0.5 3,465,094 + OKGIIK_15860 0.78 +0.6 3,465,094 + OKGIIK_15860 0.78 -0.2 3,465,094 + OKGIIK_15860 0.78 +0.9 3,465,095 - OKGIIK_15860 0.78 +0.7 3,465,095 - OKGIIK_15860 0.78 +0.4 3,465,095 - OKGIIK_15860 0.78 -1.0 3,465,095 - OKGIIK_15860 0.78 +0.5 3,465,095 - OKGIIK_15860 0.78 -1.8 3,465,095 - OKGIIK_15860 0.78 -1.5 3,465,198 + +2.4 3,465,264 + +0.4 3,465,264 + -0.4 3,465,264 + -0.8 3,465,264 + +0.6 3,465,265 - +0.9 3,465,265 - -0.2 3,465,265 - -0.2 3,465,593 + -0.1
Or see this region's nucleotide sequence