Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt purD and OKGIIK_13755 are separated by 89 nucleotides OKGIIK_13755 and OKGIIK_13760 are separated by 135 nucleotides OKGIIK_13760 and topA are separated by 0 nucleotides
OKGIIK_13750: purD - phosphoribosylamine--glycine ligase, at 2,986,821 to 2,988,104
purD
OKGIIK_13755: OKGIIK_13755 - AMP-ligase, at 2,988,194 to 2,989,567
_13755
OKGIIK_13760: OKGIIK_13760 - Threonylcarbamoyl-AMP synthase, at 2,989,703 to 2,990,275
_13760
OKGIIK_13765: topA - DNA topoisomerase I, at 2,990,276 to 2,992,759
topA
Position (kb)
2988
2989
2990 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2987.407 kb on + strand, within purD at 2987.407 kb on + strand, within purD at 2987.515 kb on + strand, within purD at 2987.515 kb on + strand, within purD at 2987.515 kb on + strand, within purD at 2987.516 kb on - strand, within purD at 2987.516 kb on - strand, within purD at 2987.516 kb on - strand, within purD at 2987.516 kb on - strand, within purD at 2987.516 kb on - strand, within purD at 2987.704 kb on + strand, within purD at 2987.704 kb on + strand, within purD at 2987.705 kb on - strand, within purD at 2988.155 kb on + strand at 2988.155 kb on + strand at 2988.155 kb on + strand at 2988.155 kb on + strand at 2988.156 kb on - strand at 2988.156 kb on - strand at 2988.156 kb on - strand at 2988.156 kb on - strand at 2988.156 kb on - strand at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.639 kb on + strand, within OKGIIK_13755 at 2988.640 kb on - strand, within OKGIIK_13755 at 2988.640 kb on - strand, within OKGIIK_13755 at 2988.640 kb on - strand, within OKGIIK_13755 at 2988.640 kb on - strand, within OKGIIK_13755 at 2988.640 kb on - strand, within OKGIIK_13755 at 2988.640 kb on - strand, within OKGIIK_13755 at 2988.640 kb on - strand, within OKGIIK_13755 at 2988.932 kb on + strand, within OKGIIK_13755 at 2988.933 kb on - strand, within OKGIIK_13755 at 2988.933 kb on - strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.975 kb on + strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2988.976 kb on - strand, within OKGIIK_13755 at 2989.102 kb on + strand, within OKGIIK_13755 at 2989.102 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.122 kb on + strand, within OKGIIK_13755 at 2989.123 kb on - strand, within OKGIIK_13755 at 2989.123 kb on - strand, within OKGIIK_13755 at 2989.123 kb on - strand, within OKGIIK_13755 at 2989.123 kb on - strand, within OKGIIK_13755 at 2989.123 kb on - strand, within OKGIIK_13755 at 2989.123 kb on - strand, within OKGIIK_13755 at 2989.123 kb on - strand, within OKGIIK_13755 at 2989.257 kb on + strand, within OKGIIK_13755 at 2989.257 kb on + strand, within OKGIIK_13755 at 2989.258 kb on - strand, within OKGIIK_13755 at 2989.258 kb on - strand, within OKGIIK_13755 at 2989.258 kb on - strand, within OKGIIK_13755 at 2989.258 kb on - strand, within OKGIIK_13755 at 2989.371 kb on + strand, within OKGIIK_13755 at 2989.371 kb on + strand, within OKGIIK_13755 at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.545 kb on + strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.546 kb on - strand at 2989.554 kb on + strand at 2989.555 kb on - strand at 2989.555 kb on - strand at 2989.618 kb on + strand at 2989.618 kb on + strand at 2989.618 kb on + strand at 2989.618 kb on + strand at 2989.618 kb on + strand at 2989.618 kb on + strand at 2989.618 kb on + strand at 2989.619 kb on - strand at 2989.619 kb on - strand at 2989.619 kb on - strand at 2989.619 kb on - strand at 2989.619 kb on - strand at 2989.619 kb on - strand at 2989.619 kb on - strand at 2989.657 kb on + strand at 2989.657 kb on + strand at 2989.657 kb on + strand at 2989.657 kb on + strand at 2989.657 kb on + strand at 2989.657 kb on + strand at 2989.658 kb on - strand at 2989.658 kb on - strand at 2989.658 kb on - strand at 2989.658 kb on - strand at 2989.658 kb on - strand at 2989.658 kb on - strand at 2989.658 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,987,407 + purD OKGIIK_13750 0.46 -2.1 2,987,407 + purD OKGIIK_13750 0.46 -1.0 2,987,515 + purD OKGIIK_13750 0.54 -1.0 2,987,515 + purD OKGIIK_13750 0.54 -0.4 2,987,515 + purD OKGIIK_13750 0.54 -1.0 2,987,516 - purD OKGIIK_13750 0.54 -0.1 2,987,516 - purD OKGIIK_13750 0.54 +0.6 2,987,516 - purD OKGIIK_13750 0.54 -1.0 2,987,516 - purD OKGIIK_13750 0.54 -0.3 2,987,516 - purD OKGIIK_13750 0.54 -1.5 2,987,704 + purD OKGIIK_13750 0.69 -1.0 2,987,704 + purD OKGIIK_13750 0.69 -1.5 2,987,705 - purD OKGIIK_13750 0.69 -0.5 2,988,155 + -1.0 2,988,155 + -1.0 2,988,155 + -3.1 2,988,155 + -1.5 2,988,156 - -2.0 2,988,156 - -0.9 2,988,156 - -1.0 2,988,156 - -1.3 2,988,156 - -1.0 2,988,639 + OKGIIK_13755 0.32 -2.7 2,988,639 + OKGIIK_13755 0.32 -0.1 2,988,639 + OKGIIK_13755 0.32 -1.3 2,988,639 + OKGIIK_13755 0.32 -2.4 2,988,639 + OKGIIK_13755 0.32 +0.0 2,988,639 + OKGIIK_13755 0.32 -1.1 2,988,639 + OKGIIK_13755 0.32 -0.3 2,988,639 + OKGIIK_13755 0.32 -1.3 2,988,639 + OKGIIK_13755 0.32 -1.6 2,988,639 + OKGIIK_13755 0.32 -1.2 2,988,639 + OKGIIK_13755 0.32 -1.0 2,988,640 - OKGIIK_13755 0.32 +0.7 2,988,640 - OKGIIK_13755 0.32 -2.4 2,988,640 - OKGIIK_13755 0.32 -0.6 2,988,640 - OKGIIK_13755 0.32 -1.6 2,988,640 - OKGIIK_13755 0.32 -1.0 2,988,640 - OKGIIK_13755 0.32 +0.5 2,988,640 - OKGIIK_13755 0.32 -1.0 2,988,932 + OKGIIK_13755 0.54 +0.1 2,988,933 - OKGIIK_13755 0.54 -2.2 2,988,933 - OKGIIK_13755 0.54 +0.7 2,988,975 + OKGIIK_13755 0.57 -1.0 2,988,975 + OKGIIK_13755 0.57 -0.3 2,988,975 + OKGIIK_13755 0.57 -1.3 2,988,975 + OKGIIK_13755 0.57 +0.6 2,988,975 + OKGIIK_13755 0.57 +0.3 2,988,975 + OKGIIK_13755 0.57 -1.8 2,988,975 + OKGIIK_13755 0.57 -0.6 2,988,975 + OKGIIK_13755 0.57 -0.2 2,988,975 + OKGIIK_13755 0.57 -0.3 2,988,975 + OKGIIK_13755 0.57 -3.1 2,988,975 + OKGIIK_13755 0.57 -1.1 2,988,975 + OKGIIK_13755 0.57 +0.6 2,988,975 + OKGIIK_13755 0.57 -0.1 2,988,975 + OKGIIK_13755 0.57 -1.3 2,988,975 + OKGIIK_13755 0.57 -2.0 2,988,975 + OKGIIK_13755 0.57 -1.6 2,988,975 + OKGIIK_13755 0.57 -2.7 2,988,975 + OKGIIK_13755 0.57 -0.6 2,988,975 + OKGIIK_13755 0.57 -0.2 2,988,975 + OKGIIK_13755 0.57 -1.4 2,988,975 + OKGIIK_13755 0.57 -1.0 2,988,975 + OKGIIK_13755 0.57 -2.9 2,988,975 + OKGIIK_13755 0.57 -1.0 2,988,975 + OKGIIK_13755 0.57 -1.6 2,988,975 + OKGIIK_13755 0.57 -2.5 2,988,975 + OKGIIK_13755 0.57 -1.3 2,988,975 + OKGIIK_13755 0.57 +0.3 2,988,975 + OKGIIK_13755 0.57 -1.0 2,988,975 + OKGIIK_13755 0.57 -1.4 2,988,975 + OKGIIK_13755 0.57 -0.6 2,988,975 + OKGIIK_13755 0.57 -2.1 2,988,975 + OKGIIK_13755 0.57 -0.6 2,988,976 - OKGIIK_13755 0.57 -0.2 2,988,976 - OKGIIK_13755 0.57 -0.1 2,988,976 - OKGIIK_13755 0.57 -1.9 2,988,976 - OKGIIK_13755 0.57 -0.6 2,988,976 - OKGIIK_13755 0.57 +0.5 2,988,976 - OKGIIK_13755 0.57 -1.3 2,988,976 - OKGIIK_13755 0.57 -2.3 2,988,976 - OKGIIK_13755 0.57 -1.3 2,988,976 - OKGIIK_13755 0.57 -1.3 2,988,976 - OKGIIK_13755 0.57 -1.3 2,988,976 - OKGIIK_13755 0.57 -2.2 2,988,976 - OKGIIK_13755 0.57 -0.2 2,988,976 - OKGIIK_13755 0.57 +0.0 2,988,976 - OKGIIK_13755 0.57 -1.6 2,988,976 - OKGIIK_13755 0.57 -0.1 2,988,976 - OKGIIK_13755 0.57 -1.1 2,988,976 - OKGIIK_13755 0.57 -1.3 2,988,976 - OKGIIK_13755 0.57 -1.1 2,988,976 - OKGIIK_13755 0.57 -1.3 2,988,976 - OKGIIK_13755 0.57 +1.0 2,988,976 - OKGIIK_13755 0.57 -0.3 2,988,976 - OKGIIK_13755 0.57 +1.0 2,988,976 - OKGIIK_13755 0.57 -1.3 2,988,976 - OKGIIK_13755 0.57 +0.6 2,988,976 - OKGIIK_13755 0.57 -1.8 2,988,976 - OKGIIK_13755 0.57 -1.8 2,988,976 - OKGIIK_13755 0.57 -1.4 2,988,976 - OKGIIK_13755 0.57 -1.3 2,988,976 - OKGIIK_13755 0.57 +0.6 2,988,976 - OKGIIK_13755 0.57 -0.6 2,988,976 - OKGIIK_13755 0.57 -1.0 2,988,976 - OKGIIK_13755 0.57 +0.0 2,988,976 - OKGIIK_13755 0.57 -0.1 2,988,976 - OKGIIK_13755 0.57 -1.0 2,988,976 - OKGIIK_13755 0.57 -1.3 2,988,976 - OKGIIK_13755 0.57 +0.1 2,988,976 - OKGIIK_13755 0.57 -0.8 2,988,976 - OKGIIK_13755 0.57 -2.6 2,988,976 - OKGIIK_13755 0.57 +0.3 2,989,102 + OKGIIK_13755 0.66 +1.0 2,989,102 + OKGIIK_13755 0.66 +0.4 2,989,122 + OKGIIK_13755 0.68 -1.0 2,989,122 + OKGIIK_13755 0.68 +0.5 2,989,122 + OKGIIK_13755 0.68 +0.0 2,989,122 + OKGIIK_13755 0.68 -0.8 2,989,122 + OKGIIK_13755 0.68 -1.3 2,989,122 + OKGIIK_13755 0.68 -0.8 2,989,122 + OKGIIK_13755 0.68 +1.4 2,989,122 + OKGIIK_13755 0.68 -2.8 2,989,122 + OKGIIK_13755 0.68 -1.3 2,989,122 + OKGIIK_13755 0.68 -1.0 2,989,122 + OKGIIK_13755 0.68 +0.1 2,989,122 + OKGIIK_13755 0.68 -2.0 2,989,122 + OKGIIK_13755 0.68 -0.6 2,989,122 + OKGIIK_13755 0.68 -1.2 2,989,123 - OKGIIK_13755 0.68 +0.5 2,989,123 - OKGIIK_13755 0.68 -1.3 2,989,123 - OKGIIK_13755 0.68 -1.4 2,989,123 - OKGIIK_13755 0.68 -0.8 2,989,123 - OKGIIK_13755 0.68 -1.0 2,989,123 - OKGIIK_13755 0.68 +1.3 2,989,123 - OKGIIK_13755 0.68 -1.0 2,989,257 + OKGIIK_13755 0.77 +1.8 2,989,257 + OKGIIK_13755 0.77 -1.3 2,989,258 - OKGIIK_13755 0.77 -1.0 2,989,258 - OKGIIK_13755 0.77 -0.0 2,989,258 - OKGIIK_13755 0.77 -1.0 2,989,258 - OKGIIK_13755 0.77 -1.0 2,989,371 + OKGIIK_13755 0.86 +0.7 2,989,371 + OKGIIK_13755 0.86 +0.3 2,989,545 + -1.7 2,989,545 + -0.5 2,989,545 + -1.0 2,989,545 + -1.6 2,989,545 + -2.7 2,989,545 + -0.2 2,989,545 + +0.8 2,989,545 + -0.3 2,989,545 + -1.3 2,989,545 + +0.3 2,989,545 + -2.0 2,989,545 + +1.0 2,989,545 + -1.6 2,989,545 + -0.3 2,989,545 + -2.0 2,989,546 - -2.0 2,989,546 - -0.6 2,989,546 - -1.2 2,989,546 - +0.8 2,989,546 - -1.0 2,989,546 - -0.2 2,989,546 - +0.2 2,989,546 - -1.3 2,989,546 - -1.0 2,989,546 - -2.0 2,989,546 - +0.8 2,989,546 - -1.6 2,989,546 - -0.6 2,989,546 - +1.4 2,989,546 - -1.0 2,989,546 - -0.0 2,989,546 - -2.1 2,989,546 - +0.0 2,989,546 - -2.3 2,989,546 - +0.4 2,989,546 - +0.7 2,989,546 - -0.7 2,989,546 - -1.0 2,989,554 + +0.4 2,989,555 - -0.6 2,989,555 - -1.6 2,989,618 + -0.7 2,989,618 + -2.3 2,989,618 + +0.4 2,989,618 + +1.5 2,989,618 + +0.4 2,989,618 + -1.6 2,989,618 + -1.0 2,989,619 - -1.8 2,989,619 - -1.3 2,989,619 - -0.8 2,989,619 - +0.4 2,989,619 - +1.0 2,989,619 - -0.9 2,989,619 - -1.0 2,989,657 + +0.0 2,989,657 + -1.4 2,989,657 + +1.0 2,989,657 + +0.4 2,989,657 + -3.0 2,989,657 + -1.8 2,989,658 - -1.6 2,989,658 - +0.0 2,989,658 - +1.0 2,989,658 - -1.3 2,989,658 - -0.4 2,989,658 - -0.4 2,989,658 - -0.2
Or see this region's nucleotide sequence