Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pqqL and OKGIIK_13250 are separated by 259 nucleotides OKGIIK_13250 and OKGIIK_13255 are separated by 41 nucleotides OKGIIK_13255 and ubiJ are separated by 122 nucleotides ubiJ and ubiB overlap by 4 nucleotides
OKGIIK_13245: pqqL - peptidase M16, at 2,857,874 to 2,860,732
pqqL
OKGIIK_13250: OKGIIK_13250 - hypothetical protein, at 2,860,992 to 2,861,195
_13250
OKGIIK_13255: OKGIIK_13255 - tRNA (cytidine(34)-2'-O)-methyltransferase, at 2,861,237 to 2,861,704
_13255
OKGIIK_13260: ubiJ - sterol-binding protein, at 2,861,827 to 2,862,477
ubiJ
OKGIIK_13265: ubiB - ubiquinone biosynthesis regulatory protein kinase UbiB, at 2,862,474 to 2,864,123
ubiB
Position (kb)
2861
2862 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2860.347 kb on + strand, within pqqL at 2860.347 kb on + strand, within pqqL at 2860.347 kb on + strand, within pqqL at 2860.347 kb on + strand, within pqqL at 2860.348 kb on - strand, within pqqL at 2860.348 kb on - strand, within pqqL at 2860.348 kb on - strand, within pqqL at 2860.348 kb on - strand, within pqqL at 2860.348 kb on - strand, within pqqL at 2860.348 kb on - strand, within pqqL at 2860.348 kb on - strand, within pqqL at 2860.348 kb on - strand, within pqqL at 2860.348 kb on - strand, within pqqL at 2860.498 kb on - strand at 2860.498 kb on - strand at 2860.515 kb on + strand at 2860.515 kb on + strand at 2860.515 kb on + strand at 2860.515 kb on + strand at 2860.515 kb on + strand at 2860.515 kb on + strand at 2860.516 kb on - strand at 2860.516 kb on - strand at 2860.516 kb on - strand at 2860.516 kb on - strand at 2860.599 kb on + strand at 2860.599 kb on + strand at 2860.599 kb on + strand at 2860.600 kb on - strand at 2860.600 kb on - strand at 2860.600 kb on - strand at 2860.600 kb on - strand at 2860.600 kb on - strand at 2860.600 kb on - strand at 2860.600 kb on - strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.755 kb on + strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.756 kb on - strand at 2860.888 kb on + strand at 2860.977 kb on + strand at 2860.977 kb on + strand at 2860.977 kb on + strand at 2860.977 kb on + strand at 2860.977 kb on + strand at 2860.977 kb on + strand at 2860.978 kb on - strand at 2860.978 kb on - strand at 2860.978 kb on - strand at 2860.978 kb on - strand at 2860.978 kb on - strand at 2860.978 kb on - strand at 2860.978 kb on - strand at 2860.978 kb on - strand at 2861.226 kb on - strand at 2861.387 kb on + strand, within OKGIIK_13255 at 2861.387 kb on + strand, within OKGIIK_13255 at 2861.388 kb on - strand, within OKGIIK_13255 at 2861.388 kb on - strand, within OKGIIK_13255 at 2861.388 kb on - strand, within OKGIIK_13255 at 2861.396 kb on + strand, within OKGIIK_13255 at 2861.396 kb on + strand, within OKGIIK_13255 at 2861.396 kb on + strand, within OKGIIK_13255 at 2861.396 kb on + strand, within OKGIIK_13255 at 2861.396 kb on + strand, within OKGIIK_13255 at 2861.396 kb on + strand, within OKGIIK_13255 at 2861.396 kb on + strand, within OKGIIK_13255 at 2861.396 kb on + strand, within OKGIIK_13255 at 2861.397 kb on - strand, within OKGIIK_13255 at 2861.397 kb on - strand, within OKGIIK_13255 at 2861.437 kb on + strand, within OKGIIK_13255 at 2861.438 kb on - strand, within OKGIIK_13255 at 2861.438 kb on - strand, within OKGIIK_13255 at 2861.438 kb on - strand, within OKGIIK_13255 at 2861.661 kb on - strand at 2861.661 kb on - strand at 2861.661 kb on - strand at 2861.661 kb on - strand at 2861.661 kb on - strand at 2861.661 kb on - strand at 2861.702 kb on + strand at 2861.702 kb on + strand at 2861.703 kb on - strand at 2861.703 kb on - strand at 2861.749 kb on + strand at 2861.749 kb on + strand at 2861.749 kb on + strand at 2861.750 kb on - strand at 2861.750 kb on - strand at 2861.750 kb on - strand at 2861.750 kb on - strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.794 kb on - strand at 2861.794 kb on - strand at 2861.815 kb on + strand at 2861.815 kb on + strand at 2861.815 kb on + strand at 2861.815 kb on + strand at 2861.815 kb on + strand at 2861.815 kb on + strand at 2861.815 kb on + strand at 2861.816 kb on - strand at 2861.816 kb on - strand at 2861.816 kb on - strand at 2861.816 kb on - strand at 2861.867 kb on + strand at 2861.867 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,860,347 + pqqL OKGIIK_13245 0.86 -0.5 2,860,347 + pqqL OKGIIK_13245 0.86 -1.5 2,860,347 + pqqL OKGIIK_13245 0.86 +1.0 2,860,347 + pqqL OKGIIK_13245 0.86 -1.5 2,860,348 - pqqL OKGIIK_13245 0.87 +0.1 2,860,348 - pqqL OKGIIK_13245 0.87 -1.1 2,860,348 - pqqL OKGIIK_13245 0.87 +0.5 2,860,348 - pqqL OKGIIK_13245 0.87 -0.3 2,860,348 - pqqL OKGIIK_13245 0.87 -0.9 2,860,348 - pqqL OKGIIK_13245 0.87 -2.9 2,860,348 - pqqL OKGIIK_13245 0.87 -1.9 2,860,348 - pqqL OKGIIK_13245 0.87 -1.7 2,860,348 - pqqL OKGIIK_13245 0.87 -2.7 2,860,498 - -1.2 2,860,498 - -0.5 2,860,515 + -0.7 2,860,515 + -2.0 2,860,515 + +0.3 2,860,515 + -0.5 2,860,515 + -0.5 2,860,515 + +0.0 2,860,516 - -0.3 2,860,516 - -0.3 2,860,516 - +0.7 2,860,516 - +1.1 2,860,599 + -0.6 2,860,599 + +0.4 2,860,599 + -0.8 2,860,600 - -0.9 2,860,600 - -1.1 2,860,600 - +2.1 2,860,600 - -0.5 2,860,600 - -0.3 2,860,600 - -0.3 2,860,600 - -0.8 2,860,755 + +0.8 2,860,755 + -1.8 2,860,755 + +1.4 2,860,755 + -0.6 2,860,755 + +0.5 2,860,755 + +1.0 2,860,755 + -1.2 2,860,755 + -1.3 2,860,755 + -0.0 2,860,755 + +1.1 2,860,755 + -0.2 2,860,756 - -0.0 2,860,756 - -0.5 2,860,756 - +0.4 2,860,756 - -0.6 2,860,756 - -0.6 2,860,756 - -1.5 2,860,756 - -0.2 2,860,756 - -0.3 2,860,756 - -0.2 2,860,756 - -1.2 2,860,756 - -1.1 2,860,756 - +0.2 2,860,756 - +0.5 2,860,888 + +1.1 2,860,977 + -1.2 2,860,977 + -1.2 2,860,977 + -0.2 2,860,977 + -1.5 2,860,977 + -0.0 2,860,977 + -0.5 2,860,978 - +0.4 2,860,978 - -2.2 2,860,978 - +0.1 2,860,978 - -0.7 2,860,978 - +0.8 2,860,978 - -1.2 2,860,978 - +0.5 2,860,978 - +0.7 2,861,226 - -0.9 2,861,387 + OKGIIK_13255 0.32 -1.2 2,861,387 + OKGIIK_13255 0.32 +1.1 2,861,388 - OKGIIK_13255 0.32 -2.8 2,861,388 - OKGIIK_13255 0.32 +0.1 2,861,388 - OKGIIK_13255 0.32 -1.5 2,861,396 + OKGIIK_13255 0.34 -1.7 2,861,396 + OKGIIK_13255 0.34 -0.9 2,861,396 + OKGIIK_13255 0.34 -1.2 2,861,396 + OKGIIK_13255 0.34 +1.1 2,861,396 + OKGIIK_13255 0.34 -0.9 2,861,396 + OKGIIK_13255 0.34 -1.2 2,861,396 + OKGIIK_13255 0.34 -0.9 2,861,396 + OKGIIK_13255 0.34 -0.5 2,861,397 - OKGIIK_13255 0.34 -0.2 2,861,397 - OKGIIK_13255 0.34 +0.3 2,861,437 + OKGIIK_13255 0.43 -1.2 2,861,438 - OKGIIK_13255 0.43 -0.9 2,861,438 - OKGIIK_13255 0.43 -1.4 2,861,438 - OKGIIK_13255 0.43 -2.1 2,861,661 - -0.5 2,861,661 - -1.2 2,861,661 - -1.1 2,861,661 - -1.7 2,861,661 - -0.2 2,861,661 - -0.7 2,861,702 + -2.1 2,861,702 + -1.2 2,861,703 - +0.8 2,861,703 - +1.1 2,861,749 + -1.9 2,861,749 + -2.8 2,861,749 + +1.1 2,861,750 - +1.6 2,861,750 - -2.1 2,861,750 - +3.9 2,861,750 - -2.4 2,861,793 + -0.7 2,861,793 + -1.5 2,861,793 + -0.9 2,861,793 + -1.2 2,861,793 + +0.1 2,861,793 + -0.8 2,861,793 + -1.2 2,861,793 + +0.2 2,861,794 - +0.6 2,861,794 - +0.1 2,861,815 + +1.1 2,861,815 + +0.1 2,861,815 + -1.9 2,861,815 + -1.4 2,861,815 + -0.4 2,861,815 + -2.5 2,861,815 + -1.5 2,861,816 - +0.5 2,861,816 - +0.5 2,861,816 - -0.7 2,861,816 - -2.4 2,861,867 + -1.7 2,861,867 + +0.1
Or see this region's nucleotide sequence