Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt uppS and OKGIIK_10165 are separated by 8 nucleotides OKGIIK_10165 and dxr are separated by 2 nucleotides dxr and rseP are separated by 36 nucleotides
OKGIIK_10160: uppS - polyprenyl diphosphate synthase, at 2,190,341 to 2,191,081
uppS
OKGIIK_10165: OKGIIK_10165 - Phosphatidate cytidylyltransferase, at 2,191,090 to 2,191,908
_10165
OKGIIK_10170: dxr - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 2,191,911 to 2,193,086
dxr
OKGIIK_10175: rseP - RIP metalloprotease RseP, at 2,193,123 to 2,194,469
rseP
Position (kb)
2191
2192
2193
2194 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2193.087 kb on + strand at 2193.087 kb on + strand at 2193.087 kb on + strand at 2193.087 kb on + strand at 2193.087 kb on + strand at 2193.087 kb on + strand at 2193.087 kb on + strand at 2193.088 kb on - strand at 2193.088 kb on - strand at 2193.088 kb on - strand at 2193.088 kb on - strand at 2193.088 kb on - strand at 2193.088 kb on - strand at 2193.088 kb on - strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.117 kb on + strand at 2193.118 kb on - strand at 2193.118 kb on - strand at 2193.118 kb on - strand at 2193.118 kb on - strand at 2194.068 kb on + strand, within rseP
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,193,087 + +0.7 2,193,087 + -0.2 2,193,087 + +0.9 2,193,087 + -2.1 2,193,087 + -1.6 2,193,087 + -0.2 2,193,087 + -0.1 2,193,088 - -0.8 2,193,088 - +0.5 2,193,088 - -1.0 2,193,088 - -0.6 2,193,088 - -2.4 2,193,088 - -0.5 2,193,088 - -0.8 2,193,117 + +0.2 2,193,117 + -0.4 2,193,117 + +1.4 2,193,117 + -0.6 2,193,117 + +2.1 2,193,117 + -1.2 2,193,117 + +0.0 2,193,117 + -1.2 2,193,117 + -1.8 2,193,117 + -0.8 2,193,117 + -0.2 2,193,117 + -0.4 2,193,117 + -0.8 2,193,117 + -2.1 2,193,117 + -0.4 2,193,117 + +1.2 2,193,118 - +0.6 2,193,118 - -1.0 2,193,118 - -2.4 2,193,118 - -0.5 2,194,068 + rseP OKGIIK_10175 0.70 -1.8
Or see this region's nucleotide sequence