Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_08550 and OKGIIK_08555 overlap by 8 nucleotides OKGIIK_08555 and ccmA are separated by 61 nucleotides ccmA and ccmB are separated by 153 nucleotides
OKGIIK_08550: OKGIIK_08550 - kynurenine 3-monooxygenase, at 1,871,336 to 1,872,790
_08550
OKGIIK_08555: OKGIIK_08555 - DUF3293 domain-containing protein, at 1,872,783 to 1,873,190
_08555
OKGIIK_08560: ccmA - cytochrome c biogenesis heme-transporting ATPase CcmA, at 1,873,252 to 1,873,887
ccmA
OKGIIK_08565: ccmB - heme exporter protein CcmB, at 1,874,041 to 1,874,727
ccmB
Position (kb)
1872
1873
1874 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1871.951 kb on + strand, within OKGIIK_08550 at 1871.951 kb on + strand, within OKGIIK_08550 at 1871.951 kb on + strand, within OKGIIK_08550 at 1871.951 kb on + strand, within OKGIIK_08550 at 1871.952 kb on - strand, within OKGIIK_08550 at 1872.071 kb on + strand, within OKGIIK_08550 at 1872.071 kb on + strand, within OKGIIK_08550 at 1872.071 kb on + strand, within OKGIIK_08550 at 1872.071 kb on + strand, within OKGIIK_08550 at 1872.071 kb on + strand, within OKGIIK_08550 at 1872.071 kb on + strand, within OKGIIK_08550 at 1872.071 kb on + strand, within OKGIIK_08550 at 1872.072 kb on - strand, within OKGIIK_08550 at 1872.072 kb on - strand, within OKGIIK_08550 at 1872.072 kb on - strand, within OKGIIK_08550 at 1872.072 kb on - strand, within OKGIIK_08550 at 1872.072 kb on - strand, within OKGIIK_08550 at 1872.072 kb on - strand, within OKGIIK_08550 at 1872.281 kb on + strand, within OKGIIK_08550 at 1872.281 kb on + strand, within OKGIIK_08550 at 1872.281 kb on + strand, within OKGIIK_08550 at 1872.281 kb on + strand, within OKGIIK_08550 at 1872.281 kb on + strand, within OKGIIK_08550 at 1872.281 kb on + strand, within OKGIIK_08550 at 1872.282 kb on - strand, within OKGIIK_08550 at 1872.282 kb on - strand, within OKGIIK_08550 at 1872.282 kb on - strand, within OKGIIK_08550 at 1872.282 kb on - strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.506 kb on + strand, within OKGIIK_08550 at 1872.507 kb on - strand, within OKGIIK_08550 at 1872.507 kb on - strand, within OKGIIK_08550 at 1872.507 kb on - strand, within OKGIIK_08550 at 1872.507 kb on - strand, within OKGIIK_08550 at 1872.507 kb on - strand, within OKGIIK_08550 at 1872.507 kb on - strand, within OKGIIK_08550 at 1872.542 kb on + strand, within OKGIIK_08550 at 1872.542 kb on + strand, within OKGIIK_08550 at 1872.543 kb on - strand, within OKGIIK_08550 at 1872.543 kb on - strand, within OKGIIK_08550 at 1872.543 kb on - strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.596 kb on + strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.597 kb on - strand, within OKGIIK_08550 at 1872.638 kb on + strand, within OKGIIK_08550 at 1872.638 kb on + strand, within OKGIIK_08550 at 1872.638 kb on + strand, within OKGIIK_08550 at 1872.639 kb on - strand, within OKGIIK_08550 at 1872.639 kb on - strand, within OKGIIK_08550 at 1872.639 kb on - strand, within OKGIIK_08550 at 1872.639 kb on - strand, within OKGIIK_08550 at 1872.644 kb on + strand, within OKGIIK_08550 at 1872.644 kb on + strand, within OKGIIK_08550 at 1872.644 kb on + strand, within OKGIIK_08550 at 1872.644 kb on + strand, within OKGIIK_08550 at 1872.759 kb on + strand at 1872.759 kb on + strand at 1872.759 kb on + strand at 1872.759 kb on + strand at 1872.759 kb on + strand at 1872.759 kb on + strand at 1872.760 kb on - strand at 1872.760 kb on - strand at 1872.760 kb on - strand at 1872.822 kb on + strand at 1872.823 kb on - strand at 1872.823 kb on - strand at 1872.823 kb on - strand at 1872.823 kb on - strand at 1872.839 kb on + strand, within OKGIIK_08555 at 1872.926 kb on + strand, within OKGIIK_08555 at 1872.927 kb on - strand, within OKGIIK_08555 at 1872.927 kb on - strand, within OKGIIK_08555 at 1872.927 kb on - strand, within OKGIIK_08555 at 1872.927 kb on - strand, within OKGIIK_08555 at 1872.927 kb on - strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,871,951 + OKGIIK_08550 0.42 -0.6 1,871,951 + OKGIIK_08550 0.42 +1.2 1,871,951 + OKGIIK_08550 0.42 -0.7 1,871,951 + OKGIIK_08550 0.42 -0.4 1,871,952 - OKGIIK_08550 0.42 +0.9 1,872,071 + OKGIIK_08550 0.51 -2.3 1,872,071 + OKGIIK_08550 0.51 +0.9 1,872,071 + OKGIIK_08550 0.51 -0.0 1,872,071 + OKGIIK_08550 0.51 -0.1 1,872,071 + OKGIIK_08550 0.51 +0.7 1,872,071 + OKGIIK_08550 0.51 -0.1 1,872,071 + OKGIIK_08550 0.51 +0.7 1,872,072 - OKGIIK_08550 0.51 +0.3 1,872,072 - OKGIIK_08550 0.51 +0.2 1,872,072 - OKGIIK_08550 0.51 +0.7 1,872,072 - OKGIIK_08550 0.51 -2.5 1,872,072 - OKGIIK_08550 0.51 +0.1 1,872,072 - OKGIIK_08550 0.51 -1.3 1,872,281 + OKGIIK_08550 0.65 +0.2 1,872,281 + OKGIIK_08550 0.65 -0.8 1,872,281 + OKGIIK_08550 0.65 -1.5 1,872,281 + OKGIIK_08550 0.65 -0.1 1,872,281 + OKGIIK_08550 0.65 -0.8 1,872,281 + OKGIIK_08550 0.65 -1.3 1,872,282 - OKGIIK_08550 0.65 +0.7 1,872,282 - OKGIIK_08550 0.65 +0.1 1,872,282 - OKGIIK_08550 0.65 -0.8 1,872,282 - OKGIIK_08550 0.65 +1.4 1,872,506 + OKGIIK_08550 0.80 +0.7 1,872,506 + OKGIIK_08550 0.80 -0.7 1,872,506 + OKGIIK_08550 0.80 +1.7 1,872,506 + OKGIIK_08550 0.80 -0.7 1,872,506 + OKGIIK_08550 0.80 -1.3 1,872,506 + OKGIIK_08550 0.80 +0.3 1,872,506 + OKGIIK_08550 0.80 +0.0 1,872,506 + OKGIIK_08550 0.80 -1.0 1,872,506 + OKGIIK_08550 0.80 +0.5 1,872,506 + OKGIIK_08550 0.80 +1.4 1,872,506 + OKGIIK_08550 0.80 +0.1 1,872,506 + OKGIIK_08550 0.80 -0.9 1,872,506 + OKGIIK_08550 0.80 +0.2 1,872,506 + OKGIIK_08550 0.80 -0.1 1,872,506 + OKGIIK_08550 0.80 +0.2 1,872,506 + OKGIIK_08550 0.80 -2.6 1,872,506 + OKGIIK_08550 0.80 -0.3 1,872,506 + OKGIIK_08550 0.80 +0.8 1,872,506 + OKGIIK_08550 0.80 -1.8 1,872,507 - OKGIIK_08550 0.80 -1.8 1,872,507 - OKGIIK_08550 0.80 -1.2 1,872,507 - OKGIIK_08550 0.80 -0.0 1,872,507 - OKGIIK_08550 0.80 -0.2 1,872,507 - OKGIIK_08550 0.80 -0.6 1,872,507 - OKGIIK_08550 0.80 +0.2 1,872,542 + OKGIIK_08550 0.83 -1.3 1,872,542 + OKGIIK_08550 0.83 +0.2 1,872,543 - OKGIIK_08550 0.83 +0.0 1,872,543 - OKGIIK_08550 0.83 +0.4 1,872,543 - OKGIIK_08550 0.83 -0.7 1,872,596 + OKGIIK_08550 0.87 -0.6 1,872,596 + OKGIIK_08550 0.87 -0.1 1,872,596 + OKGIIK_08550 0.87 -2.0 1,872,596 + OKGIIK_08550 0.87 +1.2 1,872,596 + OKGIIK_08550 0.87 -0.2 1,872,596 + OKGIIK_08550 0.87 +1.1 1,872,596 + OKGIIK_08550 0.87 -0.3 1,872,596 + OKGIIK_08550 0.87 +1.1 1,872,596 + OKGIIK_08550 0.87 -1.3 1,872,596 + OKGIIK_08550 0.87 +0.7 1,872,596 + OKGIIK_08550 0.87 -1.2 1,872,596 + OKGIIK_08550 0.87 -2.0 1,872,596 + OKGIIK_08550 0.87 -0.5 1,872,596 + OKGIIK_08550 0.87 +0.2 1,872,596 + OKGIIK_08550 0.87 -2.7 1,872,597 - OKGIIK_08550 0.87 -0.2 1,872,597 - OKGIIK_08550 0.87 +0.4 1,872,597 - OKGIIK_08550 0.87 -0.3 1,872,597 - OKGIIK_08550 0.87 +1.2 1,872,597 - OKGIIK_08550 0.87 -0.1 1,872,597 - OKGIIK_08550 0.87 +1.2 1,872,597 - OKGIIK_08550 0.87 +0.7 1,872,597 - OKGIIK_08550 0.87 -0.7 1,872,597 - OKGIIK_08550 0.87 +1.8 1,872,597 - OKGIIK_08550 0.87 -0.8 1,872,597 - OKGIIK_08550 0.87 -2.0 1,872,597 - OKGIIK_08550 0.87 +1.1 1,872,597 - OKGIIK_08550 0.87 -2.2 1,872,597 - OKGIIK_08550 0.87 -2.9 1,872,597 - OKGIIK_08550 0.87 +0.3 1,872,597 - OKGIIK_08550 0.87 -0.7 1,872,597 - OKGIIK_08550 0.87 -0.7 1,872,597 - OKGIIK_08550 0.87 +0.3 1,872,597 - OKGIIK_08550 0.87 -1.0 1,872,597 - OKGIIK_08550 0.87 +0.7 1,872,597 - OKGIIK_08550 0.87 +0.7 1,872,597 - OKGIIK_08550 0.87 +2.5 1,872,597 - OKGIIK_08550 0.87 +0.3 1,872,597 - OKGIIK_08550 0.87 -1.4 1,872,638 + OKGIIK_08550 0.89 +3.2 1,872,638 + OKGIIK_08550 0.89 +0.7 1,872,638 + OKGIIK_08550 0.89 +0.4 1,872,639 - OKGIIK_08550 0.90 -1.5 1,872,639 - OKGIIK_08550 0.90 -0.5 1,872,639 - OKGIIK_08550 0.90 -1.8 1,872,639 - OKGIIK_08550 0.90 -1.8 1,872,644 + OKGIIK_08550 0.90 -0.2 1,872,644 + OKGIIK_08550 0.90 +0.5 1,872,644 + OKGIIK_08550 0.90 -0.9 1,872,644 + OKGIIK_08550 0.90 -1.7 1,872,759 + +0.8 1,872,759 + -0.3 1,872,759 + +0.1 1,872,759 + +0.1 1,872,759 + -1.8 1,872,759 + +0.4 1,872,760 - +0.5 1,872,760 - +2.2 1,872,760 - +0.1 1,872,822 + +0.8 1,872,823 - -0.3 1,872,823 - -1.1 1,872,823 - -0.7 1,872,823 - -1.0 1,872,839 + OKGIIK_08555 0.14 +0.8 1,872,926 + OKGIIK_08555 0.35 -1.3 1,872,927 - OKGIIK_08555 0.35 -0.4 1,872,927 - OKGIIK_08555 0.35 -0.4 1,872,927 - OKGIIK_08555 0.35 -0.9 1,872,927 - OKGIIK_08555 0.35 -0.3 1,872,927 - OKGIIK_08555 0.35 +0.5 1,873,140 + OKGIIK_08555 0.88 -0.3 1,873,140 + OKGIIK_08555 0.88 +1.1 1,873,140 + OKGIIK_08555 0.88 -1.2 1,873,140 + OKGIIK_08555 0.88 -1.6 1,873,140 + OKGIIK_08555 0.88 -0.7 1,873,140 + OKGIIK_08555 0.88 +0.3 1,873,140 + OKGIIK_08555 0.88 -0.3 1,873,141 - OKGIIK_08555 0.88 -0.3 1,873,141 - OKGIIK_08555 0.88 +0.3 1,873,141 - OKGIIK_08555 0.88 -1.3 1,873,141 - OKGIIK_08555 0.88 -1.8 1,873,141 - OKGIIK_08555 0.88 -1.8 1,873,141 - OKGIIK_08555 0.88 -0.2 1,873,141 - OKGIIK_08555 0.88 +1.4 1,873,141 - OKGIIK_08555 0.88 -0.3 1,873,141 - OKGIIK_08555 0.88 -0.7 1,873,141 - OKGIIK_08555 0.88 -1.1 1,873,141 - OKGIIK_08555 0.88 -0.9 1,873,885 + +2.3 1,873,885 + -0.6 1,873,885 + -0.3 1,873,885 + -0.2 1,873,885 + +1.2 1,873,885 + +0.5 1,873,885 + -0.2 1,873,885 + +0.8 1,873,885 + -1.1
Or see this region's nucleotide sequence