Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_04900 and OKGIIK_04905 overlap by 4 nucleotides OKGIIK_04905 and OKGIIK_04910 are separated by 101 nucleotides OKGIIK_04910 and OKGIIK_04915 overlap by 4 nucleotides OKGIIK_04915 and OKGIIK_04920 are separated by 97 nucleotides
OKGIIK_04900: OKGIIK_04900 - Histidine kinase, at 1,066,883 to 1,068,277
_04900
OKGIIK_04905: OKGIIK_04905 - DNA-binding response regulator, at 1,068,274 to 1,068,951
_04905
OKGIIK_04910: OKGIIK_04910 - hypothetical protein, at 1,069,053 to 1,069,340
_04910
OKGIIK_04915: OKGIIK_04915 - Ferric uptake regulation protein, at 1,069,337 to 1,069,849
_04915
OKGIIK_04920: OKGIIK_04920 - MerC mercury resistance protein, at 1,069,947 to 1,070,381
_04920
Position (kb)
1069
1070 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1068.171 kb on + strand at 1068.171 kb on + strand at 1068.171 kb on + strand at 1068.171 kb on + strand at 1068.171 kb on + strand at 1068.172 kb on - strand at 1068.172 kb on - strand at 1068.219 kb on + strand at 1068.291 kb on + strand at 1068.292 kb on - strand at 1068.292 kb on - strand at 1068.292 kb on - strand at 1068.292 kb on - strand at 1068.292 kb on - strand at 1068.292 kb on - strand at 1068.292 kb on - strand at 1068.292 kb on - strand at 1068.293 kb on + strand at 1068.293 kb on + strand at 1068.293 kb on + strand at 1068.293 kb on + strand at 1068.294 kb on - strand at 1068.294 kb on - strand at 1068.364 kb on + strand, within OKGIIK_04905 at 1068.364 kb on + strand, within OKGIIK_04905 at 1068.364 kb on + strand, within OKGIIK_04905 at 1068.364 kb on + strand, within OKGIIK_04905 at 1068.365 kb on - strand, within OKGIIK_04905 at 1068.365 kb on - strand, within OKGIIK_04905 at 1068.365 kb on - strand, within OKGIIK_04905 at 1068.365 kb on - strand, within OKGIIK_04905 at 1068.365 kb on - strand, within OKGIIK_04905 at 1068.365 kb on - strand, within OKGIIK_04905 at 1068.365 kb on - strand, within OKGIIK_04905 at 1068.365 kb on - strand, within OKGIIK_04905 at 1068.404 kb on + strand, within OKGIIK_04905 at 1068.404 kb on + strand, within OKGIIK_04905 at 1068.467 kb on + strand, within OKGIIK_04905 at 1068.467 kb on + strand, within OKGIIK_04905 at 1068.467 kb on + strand, within OKGIIK_04905 at 1068.468 kb on - strand, within OKGIIK_04905 at 1068.468 kb on - strand, within OKGIIK_04905 at 1068.468 kb on - strand, within OKGIIK_04905 at 1068.468 kb on - strand, within OKGIIK_04905 at 1068.468 kb on - strand, within OKGIIK_04905 at 1068.468 kb on - strand, within OKGIIK_04905 at 1068.468 kb on - strand, within OKGIIK_04905 at 1068.468 kb on - strand, within OKGIIK_04905 at 1068.482 kb on + strand, within OKGIIK_04905 at 1068.483 kb on - strand, within OKGIIK_04905 at 1068.656 kb on + strand, within OKGIIK_04905 at 1068.656 kb on + strand, within OKGIIK_04905 at 1068.656 kb on + strand, within OKGIIK_04905 at 1068.656 kb on + strand, within OKGIIK_04905 at 1068.656 kb on + strand, within OKGIIK_04905 at 1068.657 kb on - strand, within OKGIIK_04905 at 1068.657 kb on - strand, within OKGIIK_04905 at 1068.657 kb on - strand, within OKGIIK_04905 at 1069.031 kb on + strand at 1069.336 kb on + strand at 1069.336 kb on + strand at 1069.336 kb on + strand at 1069.336 kb on + strand at 1069.336 kb on + strand at 1069.336 kb on + strand at 1069.336 kb on + strand at 1069.336 kb on + strand at 1069.336 kb on + strand at 1069.336 kb on + strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.337 kb on - strand at 1069.535 kb on + strand, within OKGIIK_04915 at 1069.536 kb on - strand, within OKGIIK_04915 at 1069.536 kb on - strand, within OKGIIK_04915 at 1069.536 kb on - strand, within OKGIIK_04915 at 1069.536 kb on - strand, within OKGIIK_04915 at 1069.592 kb on + strand, within OKGIIK_04915 at 1069.592 kb on + strand, within OKGIIK_04915 at 1069.592 kb on + strand, within OKGIIK_04915 at 1069.592 kb on + strand, within OKGIIK_04915 at 1069.885 kb on + strand at 1069.885 kb on + strand at 1069.886 kb on - strand at 1069.890 kb on + strand at 1069.891 kb on - strand at 1069.909 kb on + strand at 1069.909 kb on + strand at 1069.999 kb on + strand, within OKGIIK_04920 at 1069.999 kb on + strand, within OKGIIK_04920 at 1069.999 kb on + strand, within OKGIIK_04920 at 1069.999 kb on + strand, within OKGIIK_04920 at 1070.238 kb on + strand, within OKGIIK_04920 at 1070.238 kb on + strand, within OKGIIK_04920 at 1070.238 kb on + strand, within OKGIIK_04920 at 1070.238 kb on + strand, within OKGIIK_04920 at 1070.238 kb on + strand, within OKGIIK_04920 at 1070.238 kb on + strand, within OKGIIK_04920 at 1070.238 kb on + strand, within OKGIIK_04920 at 1070.239 kb on - strand, within OKGIIK_04920 at 1070.239 kb on - strand, within OKGIIK_04920 at 1070.251 kb on - strand, within OKGIIK_04920 at 1070.340 kb on + strand at 1070.340 kb on + strand at 1070.340 kb on + strand at 1070.340 kb on + strand at 1070.340 kb on + strand at 1070.340 kb on + strand at 1070.340 kb on + strand at 1070.340 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,068,171 + +0.1 1,068,171 + -2.2 1,068,171 + -2.1 1,068,171 + -2.1 1,068,171 + -1.0 1,068,172 - -1.0 1,068,172 - +1.4 1,068,219 + -0.7 1,068,291 + -0.1 1,068,292 - -0.7 1,068,292 - +0.4 1,068,292 - -0.7 1,068,292 - -0.7 1,068,292 - -1.2 1,068,292 - +1.8 1,068,292 - -1.6 1,068,292 - -0.5 1,068,293 + -0.5 1,068,293 + -1.3 1,068,293 + +0.5 1,068,293 + +1.3 1,068,294 - +0.6 1,068,294 - -1.2 1,068,364 + OKGIIK_04905 0.13 -0.6 1,068,364 + OKGIIK_04905 0.13 -0.6 1,068,364 + OKGIIK_04905 0.13 +0.8 1,068,364 + OKGIIK_04905 0.13 +0.1 1,068,365 - OKGIIK_04905 0.13 -0.7 1,068,365 - OKGIIK_04905 0.13 -0.5 1,068,365 - OKGIIK_04905 0.13 +1.0 1,068,365 - OKGIIK_04905 0.13 -1.1 1,068,365 - OKGIIK_04905 0.13 +0.2 1,068,365 - OKGIIK_04905 0.13 -0.7 1,068,365 - OKGIIK_04905 0.13 -1.2 1,068,365 - OKGIIK_04905 0.13 +0.3 1,068,404 + OKGIIK_04905 0.19 -0.4 1,068,404 + OKGIIK_04905 0.19 -0.4 1,068,467 + OKGIIK_04905 0.28 -1.4 1,068,467 + OKGIIK_04905 0.28 -0.2 1,068,467 + OKGIIK_04905 0.28 -0.6 1,068,468 - OKGIIK_04905 0.29 +1.6 1,068,468 - OKGIIK_04905 0.29 -0.4 1,068,468 - OKGIIK_04905 0.29 +0.6 1,068,468 - OKGIIK_04905 0.29 +1.0 1,068,468 - OKGIIK_04905 0.29 -1.0 1,068,468 - OKGIIK_04905 0.29 +1.3 1,068,468 - OKGIIK_04905 0.29 -0.4 1,068,468 - OKGIIK_04905 0.29 +0.8 1,068,482 + OKGIIK_04905 0.31 -0.1 1,068,483 - OKGIIK_04905 0.31 +1.2 1,068,656 + OKGIIK_04905 0.56 -1.2 1,068,656 + OKGIIK_04905 0.56 +0.2 1,068,656 + OKGIIK_04905 0.56 -1.1 1,068,656 + OKGIIK_04905 0.56 -1.5 1,068,656 + OKGIIK_04905 0.56 -0.6 1,068,657 - OKGIIK_04905 0.56 +1.6 1,068,657 - OKGIIK_04905 0.56 -0.8 1,068,657 - OKGIIK_04905 0.56 +1.3 1,069,031 + -0.3 1,069,336 + -0.4 1,069,336 + +1.0 1,069,336 + +0.6 1,069,336 + -2.6 1,069,336 + +0.6 1,069,336 + +0.5 1,069,336 + -0.2 1,069,336 + -0.8 1,069,336 + -0.4 1,069,336 + +0.3 1,069,337 - -2.8 1,069,337 - -0.4 1,069,337 - +0.4 1,069,337 - +1.1 1,069,337 - +0.3 1,069,337 - -0.7 1,069,337 - +1.5 1,069,337 - -1.0 1,069,337 - -0.4 1,069,337 - -1.6 1,069,337 - +0.2 1,069,337 - -2.1 1,069,337 - +0.4 1,069,337 - +1.2 1,069,535 + OKGIIK_04915 0.39 -1.4 1,069,536 - OKGIIK_04915 0.39 -2.3 1,069,536 - OKGIIK_04915 0.39 -1.6 1,069,536 - OKGIIK_04915 0.39 -2.0 1,069,536 - OKGIIK_04915 0.39 -0.4 1,069,592 + OKGIIK_04915 0.50 -2.4 1,069,592 + OKGIIK_04915 0.50 -0.4 1,069,592 + OKGIIK_04915 0.50 +1.6 1,069,592 + OKGIIK_04915 0.50 -0.6 1,069,885 + -1.1 1,069,885 + +1.7 1,069,886 - +1.3 1,069,890 + -0.6 1,069,891 - -2.5 1,069,909 + -0.2 1,069,909 + +0.5 1,069,999 + OKGIIK_04920 0.12 +0.4 1,069,999 + OKGIIK_04920 0.12 +0.6 1,069,999 + OKGIIK_04920 0.12 +1.9 1,069,999 + OKGIIK_04920 0.12 -0.1 1,070,238 + OKGIIK_04920 0.67 -2.0 1,070,238 + OKGIIK_04920 0.67 -1.2 1,070,238 + OKGIIK_04920 0.67 +0.1 1,070,238 + OKGIIK_04920 0.67 -1.7 1,070,238 + OKGIIK_04920 0.67 -0.8 1,070,238 + OKGIIK_04920 0.67 -0.2 1,070,238 + OKGIIK_04920 0.67 -2.2 1,070,239 - OKGIIK_04920 0.67 -0.4 1,070,239 - OKGIIK_04920 0.67 -1.9 1,070,251 - OKGIIK_04920 0.70 -2.6 1,070,340 + +0.3 1,070,340 + -0.1 1,070,340 + -0.6 1,070,340 + -0.2 1,070,340 + +1.2 1,070,340 + -1.2 1,070,340 + -0.3 1,070,340 + -0.7
Or see this region's nucleotide sequence