Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04910

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_04900 and OKGIIK_04905 overlap by 4 nucleotidesOKGIIK_04905 and OKGIIK_04910 are separated by 101 nucleotidesOKGIIK_04910 and OKGIIK_04915 overlap by 4 nucleotidesOKGIIK_04915 and OKGIIK_04920 are separated by 97 nucleotides OKGIIK_04900: OKGIIK_04900 - Histidine kinase, at 1,066,883 to 1,068,277 _04900 OKGIIK_04905: OKGIIK_04905 - DNA-binding response regulator, at 1,068,274 to 1,068,951 _04905 OKGIIK_04910: OKGIIK_04910 - hypothetical protein, at 1,069,053 to 1,069,340 _04910 OKGIIK_04915: OKGIIK_04915 - Ferric uptake regulation protein, at 1,069,337 to 1,069,849 _04915 OKGIIK_04920: OKGIIK_04920 - MerC mercury resistance protein, at 1,069,947 to 1,070,381 _04920 Position (kb) 1069 1070Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1068.171 kb on + strandat 1068.171 kb on + strandat 1068.171 kb on + strandat 1068.171 kb on + strandat 1068.171 kb on + strandat 1068.172 kb on - strandat 1068.172 kb on - strandat 1068.219 kb on + strandat 1068.291 kb on + strandat 1068.292 kb on - strandat 1068.292 kb on - strandat 1068.292 kb on - strandat 1068.292 kb on - strandat 1068.292 kb on - strandat 1068.292 kb on - strandat 1068.292 kb on - strandat 1068.292 kb on - strandat 1068.293 kb on + strandat 1068.293 kb on + strandat 1068.293 kb on + strandat 1068.293 kb on + strandat 1068.294 kb on - strandat 1068.294 kb on - strandat 1068.364 kb on + strand, within OKGIIK_04905at 1068.364 kb on + strand, within OKGIIK_04905at 1068.364 kb on + strand, within OKGIIK_04905at 1068.364 kb on + strand, within OKGIIK_04905at 1068.365 kb on - strand, within OKGIIK_04905at 1068.365 kb on - strand, within OKGIIK_04905at 1068.365 kb on - strand, within OKGIIK_04905at 1068.365 kb on - strand, within OKGIIK_04905at 1068.365 kb on - strand, within OKGIIK_04905at 1068.365 kb on - strand, within OKGIIK_04905at 1068.365 kb on - strand, within OKGIIK_04905at 1068.365 kb on - strand, within OKGIIK_04905at 1068.404 kb on + strand, within OKGIIK_04905at 1068.404 kb on + strand, within OKGIIK_04905at 1068.467 kb on + strand, within OKGIIK_04905at 1068.467 kb on + strand, within OKGIIK_04905at 1068.467 kb on + strand, within OKGIIK_04905at 1068.468 kb on - strand, within OKGIIK_04905at 1068.468 kb on - strand, within OKGIIK_04905at 1068.468 kb on - strand, within OKGIIK_04905at 1068.468 kb on - strand, within OKGIIK_04905at 1068.468 kb on - strand, within OKGIIK_04905at 1068.468 kb on - strand, within OKGIIK_04905at 1068.468 kb on - strand, within OKGIIK_04905at 1068.468 kb on - strand, within OKGIIK_04905at 1068.482 kb on + strand, within OKGIIK_04905at 1068.483 kb on - strand, within OKGIIK_04905at 1068.656 kb on + strand, within OKGIIK_04905at 1068.656 kb on + strand, within OKGIIK_04905at 1068.656 kb on + strand, within OKGIIK_04905at 1068.656 kb on + strand, within OKGIIK_04905at 1068.656 kb on + strand, within OKGIIK_04905at 1068.657 kb on - strand, within OKGIIK_04905at 1068.657 kb on - strand, within OKGIIK_04905at 1068.657 kb on - strand, within OKGIIK_04905at 1069.031 kb on + strandat 1069.336 kb on + strandat 1069.336 kb on + strandat 1069.336 kb on + strandat 1069.336 kb on + strandat 1069.336 kb on + strandat 1069.336 kb on + strandat 1069.336 kb on + strandat 1069.336 kb on + strandat 1069.336 kb on + strandat 1069.336 kb on + strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.337 kb on - strandat 1069.535 kb on + strand, within OKGIIK_04915at 1069.536 kb on - strand, within OKGIIK_04915at 1069.536 kb on - strand, within OKGIIK_04915at 1069.536 kb on - strand, within OKGIIK_04915at 1069.536 kb on - strand, within OKGIIK_04915at 1069.592 kb on + strand, within OKGIIK_04915at 1069.592 kb on + strand, within OKGIIK_04915at 1069.592 kb on + strand, within OKGIIK_04915at 1069.592 kb on + strand, within OKGIIK_04915at 1069.885 kb on + strandat 1069.885 kb on + strandat 1069.886 kb on - strandat 1069.890 kb on + strandat 1069.891 kb on - strandat 1069.909 kb on + strandat 1069.909 kb on + strandat 1069.999 kb on + strand, within OKGIIK_04920at 1069.999 kb on + strand, within OKGIIK_04920at 1069.999 kb on + strand, within OKGIIK_04920at 1069.999 kb on + strand, within OKGIIK_04920at 1070.238 kb on + strand, within OKGIIK_04920at 1070.238 kb on + strand, within OKGIIK_04920at 1070.238 kb on + strand, within OKGIIK_04920at 1070.238 kb on + strand, within OKGIIK_04920at 1070.238 kb on + strand, within OKGIIK_04920at 1070.238 kb on + strand, within OKGIIK_04920at 1070.238 kb on + strand, within OKGIIK_04920at 1070.239 kb on - strand, within OKGIIK_04920at 1070.239 kb on - strand, within OKGIIK_04920at 1070.251 kb on - strand, within OKGIIK_04920at 1070.340 kb on + strandat 1070.340 kb on + strandat 1070.340 kb on + strandat 1070.340 kb on + strandat 1070.340 kb on + strandat 1070.340 kb on + strandat 1070.340 kb on + strandat 1070.340 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,068,171 + +0.1
1,068,171 + -2.2
1,068,171 + -2.1
1,068,171 + -2.1
1,068,171 + -1.0
1,068,172 - -1.0
1,068,172 - +1.4
1,068,219 + -0.7
1,068,291 + -0.1
1,068,292 - -0.7
1,068,292 - +0.4
1,068,292 - -0.7
1,068,292 - -0.7
1,068,292 - -1.2
1,068,292 - +1.8
1,068,292 - -1.6
1,068,292 - -0.5
1,068,293 + -0.5
1,068,293 + -1.3
1,068,293 + +0.5
1,068,293 + +1.3
1,068,294 - +0.6
1,068,294 - -1.2
1,068,364 + OKGIIK_04905 0.13 -0.6
1,068,364 + OKGIIK_04905 0.13 -0.6
1,068,364 + OKGIIK_04905 0.13 +0.8
1,068,364 + OKGIIK_04905 0.13 +0.1
1,068,365 - OKGIIK_04905 0.13 -0.7
1,068,365 - OKGIIK_04905 0.13 -0.5
1,068,365 - OKGIIK_04905 0.13 +1.0
1,068,365 - OKGIIK_04905 0.13 -1.1
1,068,365 - OKGIIK_04905 0.13 +0.2
1,068,365 - OKGIIK_04905 0.13 -0.7
1,068,365 - OKGIIK_04905 0.13 -1.2
1,068,365 - OKGIIK_04905 0.13 +0.3
1,068,404 + OKGIIK_04905 0.19 -0.4
1,068,404 + OKGIIK_04905 0.19 -0.4
1,068,467 + OKGIIK_04905 0.28 -1.4
1,068,467 + OKGIIK_04905 0.28 -0.2
1,068,467 + OKGIIK_04905 0.28 -0.6
1,068,468 - OKGIIK_04905 0.29 +1.6
1,068,468 - OKGIIK_04905 0.29 -0.4
1,068,468 - OKGIIK_04905 0.29 +0.6
1,068,468 - OKGIIK_04905 0.29 +1.0
1,068,468 - OKGIIK_04905 0.29 -1.0
1,068,468 - OKGIIK_04905 0.29 +1.3
1,068,468 - OKGIIK_04905 0.29 -0.4
1,068,468 - OKGIIK_04905 0.29 +0.8
1,068,482 + OKGIIK_04905 0.31 -0.1
1,068,483 - OKGIIK_04905 0.31 +1.2
1,068,656 + OKGIIK_04905 0.56 -1.2
1,068,656 + OKGIIK_04905 0.56 +0.2
1,068,656 + OKGIIK_04905 0.56 -1.1
1,068,656 + OKGIIK_04905 0.56 -1.5
1,068,656 + OKGIIK_04905 0.56 -0.6
1,068,657 - OKGIIK_04905 0.56 +1.6
1,068,657 - OKGIIK_04905 0.56 -0.8
1,068,657 - OKGIIK_04905 0.56 +1.3
1,069,031 + -0.3
1,069,336 + -0.4
1,069,336 + +1.0
1,069,336 + +0.6
1,069,336 + -2.6
1,069,336 + +0.6
1,069,336 + +0.5
1,069,336 + -0.2
1,069,336 + -0.8
1,069,336 + -0.4
1,069,336 + +0.3
1,069,337 - -2.8
1,069,337 - -0.4
1,069,337 - +0.4
1,069,337 - +1.1
1,069,337 - +0.3
1,069,337 - -0.7
1,069,337 - +1.5
1,069,337 - -1.0
1,069,337 - -0.4
1,069,337 - -1.6
1,069,337 - +0.2
1,069,337 - -2.1
1,069,337 - +0.4
1,069,337 - +1.2
1,069,535 + OKGIIK_04915 0.39 -1.4
1,069,536 - OKGIIK_04915 0.39 -2.3
1,069,536 - OKGIIK_04915 0.39 -1.6
1,069,536 - OKGIIK_04915 0.39 -2.0
1,069,536 - OKGIIK_04915 0.39 -0.4
1,069,592 + OKGIIK_04915 0.50 -2.4
1,069,592 + OKGIIK_04915 0.50 -0.4
1,069,592 + OKGIIK_04915 0.50 +1.6
1,069,592 + OKGIIK_04915 0.50 -0.6
1,069,885 + -1.1
1,069,885 + +1.7
1,069,886 - +1.3
1,069,890 + -0.6
1,069,891 - -2.5
1,069,909 + -0.2
1,069,909 + +0.5
1,069,999 + OKGIIK_04920 0.12 +0.4
1,069,999 + OKGIIK_04920 0.12 +0.6
1,069,999 + OKGIIK_04920 0.12 +1.9
1,069,999 + OKGIIK_04920 0.12 -0.1
1,070,238 + OKGIIK_04920 0.67 -2.0
1,070,238 + OKGIIK_04920 0.67 -1.2
1,070,238 + OKGIIK_04920 0.67 +0.1
1,070,238 + OKGIIK_04920 0.67 -1.7
1,070,238 + OKGIIK_04920 0.67 -0.8
1,070,238 + OKGIIK_04920 0.67 -0.2
1,070,238 + OKGIIK_04920 0.67 -2.2
1,070,239 - OKGIIK_04920 0.67 -0.4
1,070,239 - OKGIIK_04920 0.67 -1.9
1,070,251 - OKGIIK_04920 0.70 -2.6
1,070,340 + +0.3
1,070,340 + -0.1
1,070,340 + -0.6
1,070,340 + -0.2
1,070,340 + +1.2
1,070,340 + -1.2
1,070,340 + -0.3
1,070,340 + -0.7

Or see this region's nucleotide sequence