Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06989 and MPMX19_06990 are separated by 202 nucleotides MPMX19_06990 and MPMX19_06991 are separated by 445 nucleotides
MPMX19_06989: MPMX19_06989 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 270,654 to 271,379
_06989
MPMX19_06990: MPMX19_06990 - NADH oxidase, at 271,582 to 272,697
_06990
MPMX19_06991: MPMX19_06991 - Nucleoid occlusion protein, at 273,143 to 274,069
_06991
Position (kb) 271
272
273 Strain fitness (log2 ratio) -2
-1
0
1
2 at 270.610 kb on - strand at 270.611 kb on + strand at 270.611 kb on + strand at 270.612 kb on - strand at 270.620 kb on + strand at 270.653 kb on + strand at 270.653 kb on + strand at 270.653 kb on + strand at 270.653 kb on + strand at 270.653 kb on + strand at 270.653 kb on + strand at 270.653 kb on + strand at 270.653 kb on + strand at 270.654 kb on - strand at 270.654 kb on - strand at 270.654 kb on - strand at 270.654 kb on - strand at 270.654 kb on - strand at 270.654 kb on - strand at 270.654 kb on - strand at 270.654 kb on - strand at 270.753 kb on + strand, within MPMX19_06989 at 270.753 kb on + strand, within MPMX19_06989 at 270.753 kb on + strand, within MPMX19_06989 at 270.753 kb on + strand, within MPMX19_06989 at 270.754 kb on - strand, within MPMX19_06989 at 271.046 kb on - strand, within MPMX19_06989 at 271.095 kb on + strand, within MPMX19_06989 at 271.096 kb on - strand, within MPMX19_06989 at 271.583 kb on + strand at 271.584 kb on - strand at 271.584 kb on - strand at 271.777 kb on + strand, within MPMX19_06990 at 271.777 kb on + strand, within MPMX19_06990 at 271.778 kb on - strand, within MPMX19_06990 at 271.778 kb on - strand, within MPMX19_06990 at 271.778 kb on - strand, within MPMX19_06990 at 271.943 kb on - strand, within MPMX19_06990 at 271.943 kb on - strand, within MPMX19_06990 at 272.175 kb on - strand, within MPMX19_06990 at 272.564 kb on + strand, within MPMX19_06990 at 272.565 kb on - strand, within MPMX19_06990 at 272.567 kb on + strand, within MPMX19_06990 at 272.568 kb on - strand, within MPMX19_06990 at 272.568 kb on - strand, within MPMX19_06990 at 272.568 kb on - strand, within MPMX19_06990 at 272.703 kb on + strand at 272.703 kb on + strand at 272.703 kb on + strand at 272.704 kb on - strand at 272.704 kb on - strand at 272.704 kb on - strand at 272.704 kb on - strand at 272.704 kb on - strand at 272.704 kb on - strand at 272.735 kb on + strand at 272.748 kb on - strand at 272.780 kb on + strand at 272.780 kb on + strand at 272.782 kb on + strand at 272.782 kb on + strand at 272.783 kb on - strand at 272.783 kb on - strand at 272.828 kb on - strand at 272.828 kb on - strand at 273.144 kb on + strand at 273.145 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 270,610 - -1.0 270,611 + -1.0 270,611 + -1.7 270,612 - -1.2 270,620 + +0.3 270,653 + -1.9 270,653 + -0.6 270,653 + -0.2 270,653 + +1.4 270,653 + -0.6 270,653 + -0.6 270,653 + -1.1 270,653 + -0.1 270,654 - -0.7 270,654 - -0.7 270,654 - +1.9 270,654 - -0.4 270,654 - -0.2 270,654 - -1.7 270,654 - +0.4 270,654 - -1.1 270,753 + MPMX19_06989 0.14 -0.6 270,753 + MPMX19_06989 0.14 -0.6 270,753 + MPMX19_06989 0.14 -1.4 270,753 + MPMX19_06989 0.14 +0.6 270,754 - MPMX19_06989 0.14 +0.6 271,046 - MPMX19_06989 0.54 -0.2 271,095 + MPMX19_06989 0.61 +0.0 271,096 - MPMX19_06989 0.61 +0.6 271,583 + -1.4 271,584 - +0.6 271,584 - +0.8 271,777 + MPMX19_06990 0.17 +1.4 271,777 + MPMX19_06990 0.17 +0.8 271,778 - MPMX19_06990 0.18 -1.8 271,778 - MPMX19_06990 0.18 -1.2 271,778 - MPMX19_06990 0.18 -0.8 271,943 - MPMX19_06990 0.32 +0.9 271,943 - MPMX19_06990 0.32 +2.2 272,175 - MPMX19_06990 0.53 +0.6 272,564 + MPMX19_06990 0.88 +0.2 272,565 - MPMX19_06990 0.88 +1.0 272,567 + MPMX19_06990 0.88 +0.6 272,568 - MPMX19_06990 0.88 -1.2 272,568 - MPMX19_06990 0.88 -1.1 272,568 - MPMX19_06990 0.88 +0.2 272,703 + -1.2 272,703 + -0.7 272,703 + -0.4 272,704 - -1.3 272,704 - -0.6 272,704 - -0.4 272,704 - +1.0 272,704 - +0.5 272,704 - -0.6 272,735 + -0.2 272,748 - +0.8 272,780 + +0.0 272,780 + -0.2 272,782 + +1.2 272,782 + -1.7 272,783 - -0.2 272,783 - -0.6 272,828 - -1.8 272,828 - -0.1 273,144 + -0.7 273,145 - -0.5
Or see this region's nucleotide sequence