Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06377

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06376 and MPMX19_06377 overlap by 53 nucleotidesMPMX19_06377 and MPMX19_06378 are separated by 216 nucleotidesMPMX19_06378 and MPMX19_06379 are separated by 66 nucleotides MPMX19_06376: MPMX19_06376 - Apolipoprotein N-acyltransferase, at 145,179 to 146,573 _06376 MPMX19_06377: MPMX19_06377 - hypothetical protein, at 146,521 to 147,207 _06377 MPMX19_06378: MPMX19_06378 - hypothetical protein, at 147,424 to 148,062 _06378 MPMX19_06379: MPMX19_06379 - hypothetical protein, at 148,129 to 148,584 _06379 Position (kb) 146 147 148Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 145.600 kb on + strand, within MPMX19_06376at 145.600 kb on + strand, within MPMX19_06376at 145.600 kb on + strand, within MPMX19_06376at 145.600 kb on + strand, within MPMX19_06376at 145.601 kb on - strand, within MPMX19_06376at 145.601 kb on - strand, within MPMX19_06376at 145.601 kb on - strand, within MPMX19_06376at 145.601 kb on - strand, within MPMX19_06376at 145.723 kb on + strand, within MPMX19_06376at 145.723 kb on + strand, within MPMX19_06376at 145.723 kb on + strand, within MPMX19_06376at 145.723 kb on + strand, within MPMX19_06376at 145.723 kb on + strand, within MPMX19_06376at 145.723 kb on + strand, within MPMX19_06376at 145.723 kb on + strand, within MPMX19_06376at 145.723 kb on + strand, within MPMX19_06376at 145.723 kb on + strand, within MPMX19_06376at 145.723 kb on - strand, within MPMX19_06376at 145.724 kb on - strand, within MPMX19_06376at 145.724 kb on - strand, within MPMX19_06376at 145.724 kb on - strand, within MPMX19_06376at 145.724 kb on - strand, within MPMX19_06376at 145.724 kb on - strand, within MPMX19_06376at 145.724 kb on - strand, within MPMX19_06376at 145.724 kb on - strand, within MPMX19_06376at 145.724 kb on - strand, within MPMX19_06376at 145.724 kb on - strand, within MPMX19_06376at 145.756 kb on + strand, within MPMX19_06376at 145.756 kb on + strand, within MPMX19_06376at 145.828 kb on + strand, within MPMX19_06376at 145.828 kb on + strand, within MPMX19_06376at 145.828 kb on + strand, within MPMX19_06376at 145.828 kb on + strand, within MPMX19_06376at 145.828 kb on + strand, within MPMX19_06376at 145.828 kb on + strand, within MPMX19_06376at 145.828 kb on + strand, within MPMX19_06376at 145.829 kb on - strand, within MPMX19_06376at 145.829 kb on - strand, within MPMX19_06376at 145.829 kb on - strand, within MPMX19_06376at 145.829 kb on - strand, within MPMX19_06376at 145.829 kb on - strand, within MPMX19_06376at 145.829 kb on - strand, within MPMX19_06376at 145.829 kb on - strand, within MPMX19_06376at 145.928 kb on - strand, within MPMX19_06376at 145.987 kb on + strand, within MPMX19_06376at 145.987 kb on + strand, within MPMX19_06376at 145.988 kb on - strand, within MPMX19_06376at 145.988 kb on - strand, within MPMX19_06376at 145.988 kb on - strand, within MPMX19_06376at 145.988 kb on - strand, within MPMX19_06376at 145.988 kb on - strand, within MPMX19_06376at 146.031 kb on + strand, within MPMX19_06376at 146.031 kb on + strand, within MPMX19_06376at 146.032 kb on - strand, within MPMX19_06376at 146.043 kb on - strand, within MPMX19_06376at 146.238 kb on + strand, within MPMX19_06376at 146.239 kb on - strand, within MPMX19_06376at 146.259 kb on + strand, within MPMX19_06376at 146.260 kb on + strand, within MPMX19_06376at 146.261 kb on - strand, within MPMX19_06376at 146.261 kb on - strand, within MPMX19_06376at 146.261 kb on - strand, within MPMX19_06376at 146.261 kb on - strand, within MPMX19_06376at 146.261 kb on - strand, within MPMX19_06376at 146.314 kb on + strand, within MPMX19_06376at 146.314 kb on + strand, within MPMX19_06376at 146.314 kb on + strand, within MPMX19_06376at 146.315 kb on - strand, within MPMX19_06376at 146.315 kb on - strand, within MPMX19_06376at 146.315 kb on - strand, within MPMX19_06376at 146.315 kb on - strand, within MPMX19_06376at 146.566 kb on + strandat 146.566 kb on + strandat 146.566 kb on + strandat 146.566 kb on + strandat 146.567 kb on - strandat 146.567 kb on - strandat 146.567 kb on - strandat 146.567 kb on - strandat 146.567 kb on - strandat 146.567 kb on - strandat 146.831 kb on + strand, within MPMX19_06377at 146.831 kb on + strand, within MPMX19_06377at 146.831 kb on + strand, within MPMX19_06377at 146.831 kb on + strand, within MPMX19_06377at 146.831 kb on + strand, within MPMX19_06377at 146.832 kb on + strand, within MPMX19_06377at 146.832 kb on - strand, within MPMX19_06377at 146.832 kb on - strand, within MPMX19_06377at 146.832 kb on - strand, within MPMX19_06377at 146.832 kb on - strand, within MPMX19_06377at 146.832 kb on - strand, within MPMX19_06377at 146.840 kb on + strand, within MPMX19_06377at 146.840 kb on + strand, within MPMX19_06377at 146.840 kb on + strand, within MPMX19_06377at 146.840 kb on + strand, within MPMX19_06377at 146.841 kb on - strand, within MPMX19_06377at 146.841 kb on - strand, within MPMX19_06377at 146.841 kb on - strand, within MPMX19_06377at 146.841 kb on - strand, within MPMX19_06377at 146.841 kb on - strand, within MPMX19_06377at 146.938 kb on + strand, within MPMX19_06377at 146.938 kb on + strand, within MPMX19_06377at 146.938 kb on + strand, within MPMX19_06377at 146.939 kb on - strand, within MPMX19_06377at 146.939 kb on - strand, within MPMX19_06377at 146.939 kb on - strand, within MPMX19_06377at 146.939 kb on - strand, within MPMX19_06377at 146.939 kb on - strand, within MPMX19_06377at 146.939 kb on - strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.069 kb on + strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.070 kb on - strand, within MPMX19_06377at 147.100 kb on + strand, within MPMX19_06377at 147.100 kb on + strand, within MPMX19_06377at 147.100 kb on + strand, within MPMX19_06377at 147.101 kb on - strand, within MPMX19_06377at 147.101 kb on - strand, within MPMX19_06377at 147.101 kb on - strand, within MPMX19_06377at 147.245 kb on - strandat 147.341 kb on + strandat 147.341 kb on + strandat 147.341 kb on + strandat 147.341 kb on + strandat 147.341 kb on + strandat 147.341 kb on + strandat 147.342 kb on - strandat 147.342 kb on - strandat 147.342 kb on - strandat 147.356 kb on + strandat 147.356 kb on + strandat 147.356 kb on + strandat 147.356 kb on + strandat 147.357 kb on - strandat 147.365 kb on + strandat 147.365 kb on + strandat 147.365 kb on + strandat 147.365 kb on + strandat 147.365 kb on + strandat 147.366 kb on - strandat 147.366 kb on - strandat 147.366 kb on - strandat 147.456 kb on + strandat 147.456 kb on + strandat 147.456 kb on + strandat 147.456 kb on + strandat 147.456 kb on + strandat 147.456 kb on + strandat 147.456 kb on + strandat 147.456 kb on + strandat 147.457 kb on - strandat 147.457 kb on - strandat 147.457 kb on - strandat 147.457 kb on - strandat 147.485 kb on + strandat 147.485 kb on + strandat 147.485 kb on + strandat 147.485 kb on + strandat 147.485 kb on + strandat 147.547 kb on + strand, within MPMX19_06378at 147.548 kb on - strand, within MPMX19_06378at 147.548 kb on - strand, within MPMX19_06378at 147.596 kb on - strand, within MPMX19_06378at 147.717 kb on + strand, within MPMX19_06378at 147.717 kb on + strand, within MPMX19_06378at 147.766 kb on + strand, within MPMX19_06378at 147.767 kb on - strand, within MPMX19_06378at 147.767 kb on - strand, within MPMX19_06378at 147.767 kb on - strand, within MPMX19_06378at 147.997 kb on + strand, within MPMX19_06378at 147.997 kb on + strand, within MPMX19_06378at 147.997 kb on + strand, within MPMX19_06378at 147.997 kb on + strand, within MPMX19_06378at 147.997 kb on + strand, within MPMX19_06378at 147.997 kb on + strand, within MPMX19_06378at 147.997 kb on + strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 147.998 kb on - strand, within MPMX19_06378at 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.115 kb on + strandat 148.116 kb on - strandat 148.116 kb on - strandat 148.116 kb on - strandat 148.116 kb on - strandat 148.116 kb on - strandat 148.116 kb on - strandat 148.116 kb on - strandat 148.116 kb on - strandat 148.116 kb on - strandat 148.116 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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145,600 + MPMX19_06376 0.30 -1.4
145,600 + MPMX19_06376 0.30 -0.7
145,600 + MPMX19_06376 0.30 -1.6
145,600 + MPMX19_06376 0.30 -1.3
145,601 - MPMX19_06376 0.30 +0.6
145,601 - MPMX19_06376 0.30 -0.7
145,601 - MPMX19_06376 0.30 -1.1
145,601 - MPMX19_06376 0.30 +0.2
145,723 + MPMX19_06376 0.39 -0.3
145,723 + MPMX19_06376 0.39 -1.3
145,723 + MPMX19_06376 0.39 +0.0
145,723 + MPMX19_06376 0.39 -0.2
145,723 + MPMX19_06376 0.39 -0.5
145,723 + MPMX19_06376 0.39 +0.3
145,723 + MPMX19_06376 0.39 -0.6
145,723 + MPMX19_06376 0.39 -0.7
145,723 + MPMX19_06376 0.39 +0.8
145,723 - MPMX19_06376 0.39 -0.9
145,724 - MPMX19_06376 0.39 -1.1
145,724 - MPMX19_06376 0.39 -0.6
145,724 - MPMX19_06376 0.39 -0.7
145,724 - MPMX19_06376 0.39 -0.8
145,724 - MPMX19_06376 0.39 -1.2
145,724 - MPMX19_06376 0.39 -0.2
145,724 - MPMX19_06376 0.39 -0.7
145,724 - MPMX19_06376 0.39 -1.6
145,724 - MPMX19_06376 0.39 -2.7
145,756 + MPMX19_06376 0.41 +0.3
145,756 + MPMX19_06376 0.41 -1.1
145,828 + MPMX19_06376 0.47 -0.3
145,828 + MPMX19_06376 0.47 -1.3
145,828 + MPMX19_06376 0.47 -1.4
145,828 + MPMX19_06376 0.47 -1.0
145,828 + MPMX19_06376 0.47 +0.7
145,828 + MPMX19_06376 0.47 -0.1
145,828 + MPMX19_06376 0.47 +0.2
145,829 - MPMX19_06376 0.47 -0.3
145,829 - MPMX19_06376 0.47 -1.1
145,829 - MPMX19_06376 0.47 +0.7
145,829 - MPMX19_06376 0.47 -0.6
145,829 - MPMX19_06376 0.47 -0.4
145,829 - MPMX19_06376 0.47 +0.3
145,829 - MPMX19_06376 0.47 -1.8
145,928 - MPMX19_06376 0.54 -1.0
145,987 + MPMX19_06376 0.58 -1.2
145,987 + MPMX19_06376 0.58 +2.0
145,988 - MPMX19_06376 0.58 -1.7
145,988 - MPMX19_06376 0.58 +0.6
145,988 - MPMX19_06376 0.58 -1.1
145,988 - MPMX19_06376 0.58 +0.2
145,988 - MPMX19_06376 0.58 +0.0
146,031 + MPMX19_06376 0.61 +0.3
146,031 + MPMX19_06376 0.61 -1.5
146,032 - MPMX19_06376 0.61 -1.0
146,043 - MPMX19_06376 0.62 -0.4
146,238 + MPMX19_06376 0.76 +0.0
146,239 - MPMX19_06376 0.76 -0.8
146,259 + MPMX19_06376 0.77 -0.1
146,260 + MPMX19_06376 0.77 -0.3
146,261 - MPMX19_06376 0.78 -0.4
146,261 - MPMX19_06376 0.78 -0.2
146,261 - MPMX19_06376 0.78 -1.6
146,261 - MPMX19_06376 0.78 -2.1
146,261 - MPMX19_06376 0.78 +0.0
146,314 + MPMX19_06376 0.81 -1.8
146,314 + MPMX19_06376 0.81 -0.3
146,314 + MPMX19_06376 0.81 -0.9
146,315 - MPMX19_06376 0.81 -1.0
146,315 - MPMX19_06376 0.81 -1.0
146,315 - MPMX19_06376 0.81 -0.1
146,315 - MPMX19_06376 0.81 -1.9
146,566 + -0.6
146,566 + -1.7
146,566 + +0.6
146,566 + +0.6
146,567 - -1.5
146,567 - -1.1
146,567 - -0.3
146,567 - -2.2
146,567 - -1.7
146,567 - +1.6
146,831 + MPMX19_06377 0.45 -0.4
146,831 + MPMX19_06377 0.45 -2.2
146,831 + MPMX19_06377 0.45 -1.8
146,831 + MPMX19_06377 0.45 +0.3
146,831 + MPMX19_06377 0.45 -1.0
146,832 + MPMX19_06377 0.45 -0.5
146,832 - MPMX19_06377 0.45 -0.2
146,832 - MPMX19_06377 0.45 -1.5
146,832 - MPMX19_06377 0.45 -0.6
146,832 - MPMX19_06377 0.45 -1.0
146,832 - MPMX19_06377 0.45 -0.2
146,840 + MPMX19_06377 0.46 -0.3
146,840 + MPMX19_06377 0.46 +0.6
146,840 + MPMX19_06377 0.46 -1.2
146,840 + MPMX19_06377 0.46 -1.1
146,841 - MPMX19_06377 0.47 -1.6
146,841 - MPMX19_06377 0.47 +0.6
146,841 - MPMX19_06377 0.47 -3.0
146,841 - MPMX19_06377 0.47 +0.0
146,841 - MPMX19_06377 0.47 -0.2
146,938 + MPMX19_06377 0.61 +0.2
146,938 + MPMX19_06377 0.61 -2.4
146,938 + MPMX19_06377 0.61 +0.3
146,939 - MPMX19_06377 0.61 -0.7
146,939 - MPMX19_06377 0.61 -1.2
146,939 - MPMX19_06377 0.61 -0.3
146,939 - MPMX19_06377 0.61 -1.1
146,939 - MPMX19_06377 0.61 -0.8
146,939 - MPMX19_06377 0.61 -1.2
147,069 + MPMX19_06377 0.80 +0.3
147,069 + MPMX19_06377 0.80 +0.6
147,069 + MPMX19_06377 0.80 -0.7
147,069 + MPMX19_06377 0.80 +0.6
147,069 + MPMX19_06377 0.80 -0.5
147,069 + MPMX19_06377 0.80 -0.7
147,069 + MPMX19_06377 0.80 -1.2
147,069 + MPMX19_06377 0.80 +1.9
147,069 + MPMX19_06377 0.80 +0.6
147,069 + MPMX19_06377 0.80 +1.6
147,069 + MPMX19_06377 0.80 -0.6
147,069 + MPMX19_06377 0.80 +0.6
147,069 + MPMX19_06377 0.80 +0.3
147,069 + MPMX19_06377 0.80 -1.7
147,069 + MPMX19_06377 0.80 -1.0
147,069 + MPMX19_06377 0.80 -0.9
147,069 + MPMX19_06377 0.80 -2.0
147,069 + MPMX19_06377 0.80 -0.3
147,069 + MPMX19_06377 0.80 +0.6
147,069 + MPMX19_06377 0.80 -0.2
147,070 - MPMX19_06377 0.80 -0.8
147,070 - MPMX19_06377 0.80 -0.4
147,070 - MPMX19_06377 0.80 -0.4
147,070 - MPMX19_06377 0.80 -0.3
147,070 - MPMX19_06377 0.80 -0.1
147,070 - MPMX19_06377 0.80 -1.2
147,070 - MPMX19_06377 0.80 -0.6
147,070 - MPMX19_06377 0.80 -0.7
147,070 - MPMX19_06377 0.80 -1.5
147,070 - MPMX19_06377 0.80 +0.3
147,070 - MPMX19_06377 0.80 -1.0
147,070 - MPMX19_06377 0.80 -0.2
147,070 - MPMX19_06377 0.80 -1.2
147,070 - MPMX19_06377 0.80 -0.6
147,070 - MPMX19_06377 0.80 +0.5
147,070 - MPMX19_06377 0.80 -1.4
147,070 - MPMX19_06377 0.80 +1.6
147,070 - MPMX19_06377 0.80 +0.8
147,070 - MPMX19_06377 0.80 -0.7
147,070 - MPMX19_06377 0.80 -1.2
147,070 - MPMX19_06377 0.80 -0.6
147,070 - MPMX19_06377 0.80 -1.0
147,070 - MPMX19_06377 0.80 -0.5
147,100 + MPMX19_06377 0.84 -0.6
147,100 + MPMX19_06377 0.84 +0.2
147,100 + MPMX19_06377 0.84 -1.4
147,101 - MPMX19_06377 0.84 -0.6
147,101 - MPMX19_06377 0.84 -0.4
147,101 - MPMX19_06377 0.84 -0.4
147,245 - -0.7
147,341 + -0.8
147,341 + +1.0
147,341 + -1.1
147,341 + -1.1
147,341 + +0.0
147,341 + +1.6
147,342 - +0.6
147,342 - -1.2
147,342 - -1.0
147,356 + -0.2
147,356 + +1.2
147,356 + -0.6
147,356 + -0.1
147,357 - -0.7
147,365 + +0.6
147,365 + +0.0
147,365 + -0.4
147,365 + +1.0
147,365 + -1.5
147,366 - -1.0
147,366 - -1.0
147,366 - -0.7
147,456 + -1.2
147,456 + -1.0
147,456 + +0.3
147,456 + +0.6
147,456 + -2.1
147,456 + -0.6
147,456 + +2.0
147,456 + -1.1
147,457 - +0.2
147,457 - +1.0
147,457 - +0.3
147,457 - -0.6
147,485 + -0.8
147,485 + +2.4
147,485 + -2.1
147,485 + -1.3
147,485 + +0.6
147,547 + MPMX19_06378 0.19 -0.5
147,548 - MPMX19_06378 0.19 -1.5
147,548 - MPMX19_06378 0.19 -1.6
147,596 - MPMX19_06378 0.27 +1.4
147,717 + MPMX19_06378 0.46 +0.2
147,717 + MPMX19_06378 0.46 -1.1
147,766 + MPMX19_06378 0.54 -0.6
147,767 - MPMX19_06378 0.54 +0.8
147,767 - MPMX19_06378 0.54 -0.4
147,767 - MPMX19_06378 0.54 +0.0
147,997 + MPMX19_06378 0.90 +1.6
147,997 + MPMX19_06378 0.90 -1.0
147,997 + MPMX19_06378 0.90 -0.8
147,997 + MPMX19_06378 0.90 -0.2
147,997 + MPMX19_06378 0.90 -0.2
147,997 + MPMX19_06378 0.90 +0.2
147,997 + MPMX19_06378 0.90 -1.3
147,998 - MPMX19_06378 0.90 -0.5
147,998 - MPMX19_06378 0.90 -0.7
147,998 - MPMX19_06378 0.90 -0.3
147,998 - MPMX19_06378 0.90 +0.0
147,998 - MPMX19_06378 0.90 +0.5
147,998 - MPMX19_06378 0.90 -0.7
147,998 - MPMX19_06378 0.90 +1.0
147,998 - MPMX19_06378 0.90 -0.0
147,998 - MPMX19_06378 0.90 +1.7
147,998 - MPMX19_06378 0.90 -1.6
147,998 - MPMX19_06378 0.90 -0.4
147,998 - MPMX19_06378 0.90 -1.1
147,998 - MPMX19_06378 0.90 -1.3
148,115 + -0.8
148,115 + +0.0
148,115 + +0.2
148,115 + -1.0
148,115 + -0.1
148,115 + -0.5
148,115 + -0.8
148,115 + +0.4
148,115 + -0.6
148,115 + -0.3
148,115 + -0.2
148,115 + +0.8
148,115 + +0.2
148,116 - -0.7
148,116 - +0.2
148,116 - +1.0
148,116 - -0.3
148,116 - -1.8
148,116 - -0.1
148,116 - -0.8
148,116 - +0.6
148,116 - -1.6
148,116 - -1.1

Or see this region's nucleotide sequence