Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06159 and MPMX19_06160 are separated by 13 nucleotides MPMX19_06160 and MPMX19_06161 are separated by 66 nucleotides MPMX19_06161 and MPMX19_06162 are separated by 97 nucleotides
MPMX19_06159: MPMX19_06159 - N-carbamoyl-L-amino acid hydrolase, at 343,979 to 345,241
_06159
MPMX19_06160: MPMX19_06160 - Succinyl-diaminopimelate desuccinylase, at 345,255 to 346,508
_06160
MPMX19_06161: MPMX19_06161 - hypothetical protein, at 346,575 to 347,102
_06161
MPMX19_06162: MPMX19_06162 - hypothetical protein, at 347,200 to 348,996
_06162
Position (kb) 345
346
347 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 344.267 kb on + strand, within MPMX19_06159 at 344.267 kb on + strand, within MPMX19_06159 at 344.268 kb on - strand, within MPMX19_06159 at 344.268 kb on - strand, within MPMX19_06159 at 344.268 kb on - strand, within MPMX19_06159 at 344.268 kb on - strand, within MPMX19_06159 at 344.531 kb on + strand, within MPMX19_06159 at 344.531 kb on + strand, within MPMX19_06159 at 344.531 kb on + strand, within MPMX19_06159 at 344.531 kb on + strand, within MPMX19_06159 at 344.531 kb on + strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.532 kb on - strand, within MPMX19_06159 at 344.555 kb on + strand, within MPMX19_06159 at 344.555 kb on + strand, within MPMX19_06159 at 344.555 kb on + strand, within MPMX19_06159 at 344.555 kb on + strand, within MPMX19_06159 at 344.556 kb on - strand, within MPMX19_06159 at 344.556 kb on - strand, within MPMX19_06159 at 344.556 kb on - strand, within MPMX19_06159 at 344.556 kb on - strand, within MPMX19_06159 at 345.192 kb on + strand at 345.192 kb on + strand at 345.527 kb on + strand, within MPMX19_06160 at 345.527 kb on + strand, within MPMX19_06160 at 345.527 kb on + strand, within MPMX19_06160 at 345.527 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.621 kb on + strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.622 kb on - strand, within MPMX19_06160 at 345.663 kb on + strand, within MPMX19_06160 at 345.663 kb on + strand, within MPMX19_06160 at 345.663 kb on + strand, within MPMX19_06160 at 345.663 kb on + strand, within MPMX19_06160 at 345.664 kb on - strand, within MPMX19_06160 at 345.664 kb on - strand, within MPMX19_06160 at 345.664 kb on - strand, within MPMX19_06160 at 345.664 kb on - strand, within MPMX19_06160 at 345.664 kb on - strand, within MPMX19_06160 at 345.735 kb on + strand, within MPMX19_06160 at 345.735 kb on + strand, within MPMX19_06160 at 345.735 kb on + strand, within MPMX19_06160 at 345.735 kb on + strand, within MPMX19_06160 at 345.736 kb on - strand, within MPMX19_06160 at 345.736 kb on - strand, within MPMX19_06160 at 345.804 kb on + strand, within MPMX19_06160 at 345.960 kb on + strand, within MPMX19_06160 at 345.960 kb on + strand, within MPMX19_06160 at 345.960 kb on + strand, within MPMX19_06160 at 345.960 kb on + strand, within MPMX19_06160 at 345.960 kb on + strand, within MPMX19_06160 at 345.960 kb on + strand, within MPMX19_06160 at 345.960 kb on + strand, within MPMX19_06160 at 345.960 kb on + strand, within MPMX19_06160 at 345.961 kb on - strand, within MPMX19_06160 at 345.961 kb on - strand, within MPMX19_06160 at 345.961 kb on - strand, within MPMX19_06160 at 345.961 kb on - strand, within MPMX19_06160 at 346.320 kb on + strand, within MPMX19_06160 at 346.320 kb on + strand, within MPMX19_06160 at 346.320 kb on + strand, within MPMX19_06160 at 346.321 kb on - strand, within MPMX19_06160 at 346.321 kb on - strand, within MPMX19_06160 at 346.338 kb on + strand, within MPMX19_06160 at 346.339 kb on - strand, within MPMX19_06160 at 346.368 kb on + strand, within MPMX19_06160 at 346.369 kb on - strand, within MPMX19_06160 at 346.369 kb on - strand, within MPMX19_06160 at 346.369 kb on - strand, within MPMX19_06160 at 346.506 kb on + strand at 346.506 kb on + strand at 346.506 kb on + strand at 346.523 kb on + strand at 346.523 kb on + strand at 346.523 kb on + strand at 346.524 kb on - strand at 346.528 kb on + strand at 346.528 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.541 kb on + strand at 346.542 kb on - strand at 346.542 kb on - strand at 346.542 kb on - strand at 346.542 kb on - strand at 346.542 kb on - strand at 346.542 kb on - strand at 346.542 kb on - strand at 346.542 kb on - strand at 346.542 kb on - strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.597 kb on + strand at 346.598 kb on - strand at 346.598 kb on - strand at 346.598 kb on - strand at 346.598 kb on - strand at 346.598 kb on - strand at 346.598 kb on - strand at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.654 kb on + strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 346.655 kb on - strand, within MPMX19_06161 at 347.021 kb on - strand, within MPMX19_06161 at 347.056 kb on + strand at 347.056 kb on + strand at 347.057 kb on - strand at 347.057 kb on - strand at 347.057 kb on - strand at 347.168 kb on + strand at 347.168 kb on + strand at 347.168 kb on + strand at 347.168 kb on + strand at 347.168 kb on + strand at 347.169 kb on - strand at 347.169 kb on - strand at 347.169 kb on - strand at 347.169 kb on - strand at 347.202 kb on - strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.239 kb on + strand at 347.240 kb on - strand at 347.240 kb on - strand at 347.240 kb on - strand at 347.240 kb on - strand at 347.240 kb on - strand at 347.240 kb on - strand at 347.384 kb on + strand, within MPMX19_06162 at 347.384 kb on + strand, within MPMX19_06162 at 347.385 kb on - strand, within MPMX19_06162 at 347.385 kb on - strand, within MPMX19_06162 at 347.385 kb on - strand, within MPMX19_06162 at 347.444 kb on + strand, within MPMX19_06162 at 347.444 kb on + strand, within MPMX19_06162 at 347.444 kb on + strand, within MPMX19_06162 at 347.444 kb on + strand, within MPMX19_06162 at 347.444 kb on + strand, within MPMX19_06162 at 347.444 kb on + strand, within MPMX19_06162 at 347.444 kb on + strand, within MPMX19_06162 at 347.444 kb on + strand, within MPMX19_06162 at 347.445 kb on - strand, within MPMX19_06162 at 347.445 kb on - strand, within MPMX19_06162 at 347.445 kb on - strand, within MPMX19_06162 at 347.445 kb on - strand, within MPMX19_06162 at 347.445 kb on - strand, within MPMX19_06162 at 347.445 kb on - strand, within MPMX19_06162 at 347.445 kb on - strand, within MPMX19_06162 at 347.477 kb on + strand, within MPMX19_06162 at 347.477 kb on + strand, within MPMX19_06162 at 347.477 kb on + strand, within MPMX19_06162 at 347.477 kb on + strand, within MPMX19_06162 at 347.477 kb on + strand, within MPMX19_06162 at 347.477 kb on + strand, within MPMX19_06162 at 347.478 kb on - strand, within MPMX19_06162 at 347.478 kb on - strand, within MPMX19_06162 at 347.478 kb on - strand, within MPMX19_06162 at 347.478 kb on - strand, within MPMX19_06162 at 347.478 kb on - strand, within MPMX19_06162 at 347.478 kb on - strand, within MPMX19_06162
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 344,267 + MPMX19_06159 0.23 -0.3 344,267 + MPMX19_06159 0.23 -1.2 344,268 - MPMX19_06159 0.23 -1.5 344,268 - MPMX19_06159 0.23 -0.2 344,268 - MPMX19_06159 0.23 -0.6 344,268 - MPMX19_06159 0.23 -0.5 344,531 + MPMX19_06159 0.44 +1.1 344,531 + MPMX19_06159 0.44 -0.6 344,531 + MPMX19_06159 0.44 -2.2 344,531 + MPMX19_06159 0.44 -0.0 344,531 + MPMX19_06159 0.44 -2.1 344,532 - MPMX19_06159 0.44 -0.9 344,532 - MPMX19_06159 0.44 +0.5 344,532 - MPMX19_06159 0.44 +0.2 344,532 - MPMX19_06159 0.44 +1.0 344,532 - MPMX19_06159 0.44 +0.4 344,532 - MPMX19_06159 0.44 -0.3 344,532 - MPMX19_06159 0.44 -1.3 344,532 - MPMX19_06159 0.44 +0.7 344,532 - MPMX19_06159 0.44 -1.0 344,532 - MPMX19_06159 0.44 +0.3 344,532 - MPMX19_06159 0.44 -0.3 344,555 + MPMX19_06159 0.46 -0.9 344,555 + MPMX19_06159 0.46 +0.4 344,555 + MPMX19_06159 0.46 -0.4 344,555 + MPMX19_06159 0.46 -0.5 344,556 - MPMX19_06159 0.46 -0.3 344,556 - MPMX19_06159 0.46 -1.0 344,556 - MPMX19_06159 0.46 -0.8 344,556 - MPMX19_06159 0.46 -0.3 345,192 + -0.0 345,192 + -0.7 345,527 + MPMX19_06160 0.22 -1.2 345,527 + MPMX19_06160 0.22 -0.9 345,527 + MPMX19_06160 0.22 +0.5 345,527 + MPMX19_06160 0.22 -0.0 345,621 + MPMX19_06160 0.29 +0.7 345,621 + MPMX19_06160 0.29 +0.5 345,621 + MPMX19_06160 0.29 -2.4 345,621 + MPMX19_06160 0.29 -1.9 345,621 + MPMX19_06160 0.29 -0.4 345,621 + MPMX19_06160 0.29 -0.0 345,621 + MPMX19_06160 0.29 -1.0 345,621 + MPMX19_06160 0.29 -0.3 345,621 + MPMX19_06160 0.29 -0.0 345,621 + MPMX19_06160 0.29 +0.5 345,621 + MPMX19_06160 0.29 -0.0 345,621 + MPMX19_06160 0.29 -1.7 345,622 - MPMX19_06160 0.29 +0.7 345,622 - MPMX19_06160 0.29 +0.2 345,622 - MPMX19_06160 0.29 +0.5 345,622 - MPMX19_06160 0.29 +0.5 345,622 - MPMX19_06160 0.29 +0.2 345,622 - MPMX19_06160 0.29 -0.0 345,622 - MPMX19_06160 0.29 -1.3 345,622 - MPMX19_06160 0.29 -0.5 345,622 - MPMX19_06160 0.29 -0.3 345,622 - MPMX19_06160 0.29 -0.3 345,622 - MPMX19_06160 0.29 +2.0 345,663 + MPMX19_06160 0.33 +0.0 345,663 + MPMX19_06160 0.33 -0.0 345,663 + MPMX19_06160 0.33 -1.1 345,663 + MPMX19_06160 0.33 +1.2 345,664 - MPMX19_06160 0.33 +1.0 345,664 - MPMX19_06160 0.33 +1.0 345,664 - MPMX19_06160 0.33 -2.0 345,664 - MPMX19_06160 0.33 -0.0 345,664 - MPMX19_06160 0.33 -0.9 345,735 + MPMX19_06160 0.38 -0.0 345,735 + MPMX19_06160 0.38 -0.8 345,735 + MPMX19_06160 0.38 -1.0 345,735 + MPMX19_06160 0.38 -0.8 345,736 - MPMX19_06160 0.38 +0.2 345,736 - MPMX19_06160 0.38 -0.9 345,804 + MPMX19_06160 0.44 -0.0 345,960 + MPMX19_06160 0.56 -0.5 345,960 + MPMX19_06160 0.56 -1.0 345,960 + MPMX19_06160 0.56 -0.6 345,960 + MPMX19_06160 0.56 -2.3 345,960 + MPMX19_06160 0.56 -1.5 345,960 + MPMX19_06160 0.56 -0.3 345,960 + MPMX19_06160 0.56 -0.3 345,960 + MPMX19_06160 0.56 +0.2 345,961 - MPMX19_06160 0.56 -0.7 345,961 - MPMX19_06160 0.56 -0.5 345,961 - MPMX19_06160 0.56 +0.2 345,961 - MPMX19_06160 0.56 -0.2 346,320 + MPMX19_06160 0.85 -1.4 346,320 + MPMX19_06160 0.85 -0.2 346,320 + MPMX19_06160 0.85 +0.5 346,321 - MPMX19_06160 0.85 -0.9 346,321 - MPMX19_06160 0.85 -2.2 346,338 + MPMX19_06160 0.86 -0.0 346,339 - MPMX19_06160 0.86 -0.3 346,368 + MPMX19_06160 0.89 +0.2 346,369 - MPMX19_06160 0.89 -1.0 346,369 - MPMX19_06160 0.89 -0.5 346,369 - MPMX19_06160 0.89 +2.0 346,506 + -2.3 346,506 + +0.0 346,506 + +0.7 346,523 + -1.2 346,523 + -0.3 346,523 + +1.3 346,524 - -1.3 346,528 + +0.3 346,528 + -1.4 346,541 + -1.0 346,541 + -1.0 346,541 + -0.5 346,541 + -0.5 346,541 + +0.1 346,541 + -0.3 346,541 + -1.8 346,541 + -0.5 346,541 + -2.0 346,541 + -0.5 346,541 + +0.1 346,542 - +1.5 346,542 - +0.2 346,542 - +0.8 346,542 - -0.8 346,542 - -1.5 346,542 - -0.6 346,542 - -1.7 346,542 - -1.3 346,542 - +0.4 346,597 + -0.2 346,597 + -0.5 346,597 + -1.1 346,597 + -0.4 346,597 + -1.5 346,597 + -1.2 346,597 + -0.9 346,597 + -0.5 346,597 + +0.6 346,597 + -0.5 346,597 + -1.2 346,597 + -0.7 346,597 + -2.2 346,597 + -0.8 346,597 + -2.6 346,598 - +0.3 346,598 - +1.2 346,598 - -2.3 346,598 - -1.4 346,598 - -0.9 346,598 - +0.2 346,654 + MPMX19_06161 0.15 -1.7 346,654 + MPMX19_06161 0.15 -0.3 346,654 + MPMX19_06161 0.15 -1.7 346,654 + MPMX19_06161 0.15 -0.8 346,654 + MPMX19_06161 0.15 -0.9 346,654 + MPMX19_06161 0.15 -1.3 346,654 + MPMX19_06161 0.15 -2.4 346,654 + MPMX19_06161 0.15 -0.6 346,654 + MPMX19_06161 0.15 -0.6 346,654 + MPMX19_06161 0.15 +0.3 346,654 + MPMX19_06161 0.15 -0.6 346,654 + MPMX19_06161 0.15 +2.0 346,654 + MPMX19_06161 0.15 -1.3 346,654 + MPMX19_06161 0.15 -0.8 346,655 - MPMX19_06161 0.15 +1.5 346,655 - MPMX19_06161 0.15 +0.2 346,655 - MPMX19_06161 0.15 -0.9 346,655 - MPMX19_06161 0.15 -0.8 346,655 - MPMX19_06161 0.15 -1.5 346,655 - MPMX19_06161 0.15 -0.5 346,655 - MPMX19_06161 0.15 +0.7 346,655 - MPMX19_06161 0.15 -1.5 346,655 - MPMX19_06161 0.15 -0.7 346,655 - MPMX19_06161 0.15 +0.5 346,655 - MPMX19_06161 0.15 -1.0 346,655 - MPMX19_06161 0.15 -0.7 347,021 - MPMX19_06161 0.84 -1.0 347,056 + -1.5 347,056 + -0.5 347,057 - -0.0 347,057 - +0.1 347,057 - +0.2 347,168 + +2.0 347,168 + -1.4 347,168 + -1.2 347,168 + -0.7 347,168 + -2.0 347,169 - -1.0 347,169 - +0.4 347,169 - -0.8 347,169 - -1.4 347,202 - -0.6 347,239 + -0.3 347,239 + -0.9 347,239 + -1.2 347,239 + +0.1 347,239 + -2.8 347,239 + -0.2 347,239 + -2.0 347,239 + +1.5 347,239 + -0.0 347,239 + -0.9 347,239 + -0.5 347,240 - +2.1 347,240 - -1.2 347,240 - -0.3 347,240 - -2.5 347,240 - +1.2 347,240 - -0.0 347,384 + MPMX19_06162 0.10 -1.4 347,384 + MPMX19_06162 0.10 -0.3 347,385 - MPMX19_06162 0.10 +0.4 347,385 - MPMX19_06162 0.10 -0.5 347,385 - MPMX19_06162 0.10 -0.6 347,444 + MPMX19_06162 0.14 +0.1 347,444 + MPMX19_06162 0.14 -0.6 347,444 + MPMX19_06162 0.14 -0.3 347,444 + MPMX19_06162 0.14 -1.5 347,444 + MPMX19_06162 0.14 -1.8 347,444 + MPMX19_06162 0.14 -1.3 347,444 + MPMX19_06162 0.14 +1.4 347,444 + MPMX19_06162 0.14 -2.1 347,445 - MPMX19_06162 0.14 -2.0 347,445 - MPMX19_06162 0.14 -0.8 347,445 - MPMX19_06162 0.14 -1.0 347,445 - MPMX19_06162 0.14 -0.2 347,445 - MPMX19_06162 0.14 -1.7 347,445 - MPMX19_06162 0.14 -1.5 347,445 - MPMX19_06162 0.14 -1.2 347,477 + MPMX19_06162 0.15 +2.2 347,477 + MPMX19_06162 0.15 -0.5 347,477 + MPMX19_06162 0.15 +0.2 347,477 + MPMX19_06162 0.15 -1.5 347,477 + MPMX19_06162 0.15 +0.2 347,477 + MPMX19_06162 0.15 +0.7 347,478 - MPMX19_06162 0.15 -1.8 347,478 - MPMX19_06162 0.15 +0.1 347,478 - MPMX19_06162 0.15 -1.4 347,478 - MPMX19_06162 0.15 -1.3 347,478 - MPMX19_06162 0.15 -1.2 347,478 - MPMX19_06162 0.15 -0.7
Or see this region's nucleotide sequence