Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06041 and MPMX19_06042 overlap by 20 nucleotides MPMX19_06042 and MPMX19_06043 are separated by 395 nucleotides
MPMX19_06041: MPMX19_06041 - hypothetical protein, at 198,273 to 200,168
_06041
MPMX19_06042: MPMX19_06042 - hypothetical protein, at 200,149 to 200,811
_06042
MPMX19_06043: MPMX19_06043 - hypothetical protein, at 201,207 to 202,019
_06043
Position (kb) 200
201 Strain fitness (log2 ratio) -2
-1
0
1
2 at 199.162 kb on + strand, within MPMX19_06041 at 199.162 kb on + strand, within MPMX19_06041 at 199.162 kb on + strand, within MPMX19_06041 at 199.163 kb on - strand, within MPMX19_06041 at 199.499 kb on + strand, within MPMX19_06041 at 199.609 kb on + strand, within MPMX19_06041 at 200.068 kb on + strand at 200.068 kb on + strand at 200.068 kb on + strand at 200.068 kb on + strand at 200.069 kb on - strand at 200.069 kb on - strand at 200.279 kb on + strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.280 kb on - strand, within MPMX19_06042 at 200.318 kb on + strand, within MPMX19_06042 at 200.318 kb on + strand, within MPMX19_06042 at 200.318 kb on + strand, within MPMX19_06042 at 200.318 kb on + strand, within MPMX19_06042 at 200.318 kb on + strand, within MPMX19_06042 at 200.318 kb on + strand, within MPMX19_06042 at 200.318 kb on + strand, within MPMX19_06042 at 200.319 kb on - strand, within MPMX19_06042 at 200.319 kb on - strand, within MPMX19_06042 at 200.319 kb on - strand, within MPMX19_06042 at 200.319 kb on - strand, within MPMX19_06042 at 200.319 kb on - strand, within MPMX19_06042 at 200.319 kb on - strand, within MPMX19_06042 at 200.319 kb on - strand, within MPMX19_06042 at 200.760 kb on + strand at 200.760 kb on + strand at 200.760 kb on + strand at 200.760 kb on + strand at 200.760 kb on + strand at 200.760 kb on + strand at 200.761 kb on - strand at 200.885 kb on + strand at 200.886 kb on - strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.920 kb on + strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.921 kb on - strand at 200.925 kb on + strand at 200.925 kb on + strand at 200.925 kb on + strand at 200.950 kb on + strand at 200.950 kb on + strand at 200.950 kb on + strand at 200.951 kb on - strand at 200.951 kb on - strand at 200.951 kb on - strand at 201.045 kb on - strand at 201.045 kb on - strand at 201.045 kb on - strand at 201.065 kb on - strand at 201.065 kb on - strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.157 kb on + strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.158 kb on - strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.159 kb on + strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.160 kb on - strand at 201.195 kb on + strand at 201.195 kb on + strand at 201.195 kb on + strand at 201.195 kb on + strand at 201.195 kb on + strand at 201.195 kb on + strand at 201.196 kb on - strand at 201.196 kb on - strand at 201.196 kb on - strand at 201.196 kb on - strand at 201.196 kb on - strand at 201.348 kb on + strand, within MPMX19_06043 at 201.348 kb on + strand, within MPMX19_06043 at 201.348 kb on + strand, within MPMX19_06043 at 201.348 kb on + strand, within MPMX19_06043 at 201.348 kb on + strand, within MPMX19_06043 at 201.349 kb on - strand, within MPMX19_06043 at 201.349 kb on - strand, within MPMX19_06043 at 201.349 kb on - strand, within MPMX19_06043 at 201.349 kb on - strand, within MPMX19_06043 at 201.349 kb on - strand, within MPMX19_06043 at 201.349 kb on - strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.351 kb on + strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.352 kb on - strand, within MPMX19_06043 at 201.543 kb on + strand, within MPMX19_06043 at 201.651 kb on + strand, within MPMX19_06043 at 201.651 kb on + strand, within MPMX19_06043 at 201.651 kb on + strand, within MPMX19_06043 at 201.651 kb on + strand, within MPMX19_06043 at 201.651 kb on + strand, within MPMX19_06043 at 201.651 kb on + strand, within MPMX19_06043 at 201.651 kb on + strand, within MPMX19_06043 at 201.651 kb on + strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043 at 201.652 kb on - strand, within MPMX19_06043
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 199,162 + MPMX19_06041 0.47 -0.6 199,162 + MPMX19_06041 0.47 +0.4 199,162 + MPMX19_06041 0.47 -0.4 199,163 - MPMX19_06041 0.47 -1.5 199,499 + MPMX19_06041 0.65 -0.0 199,609 + MPMX19_06041 0.70 +0.1 200,068 + -0.0 200,068 + -1.1 200,068 + -1.8 200,068 + +0.4 200,069 - +0.2 200,069 - -0.3 200,279 + MPMX19_06042 0.20 +1.6 200,280 - MPMX19_06042 0.20 +0.2 200,280 - MPMX19_06042 0.20 -0.6 200,280 - MPMX19_06042 0.20 -1.3 200,280 - MPMX19_06042 0.20 -0.9 200,280 - MPMX19_06042 0.20 +1.0 200,280 - MPMX19_06042 0.20 -0.6 200,280 - MPMX19_06042 0.20 +0.2 200,280 - MPMX19_06042 0.20 -1.1 200,280 - MPMX19_06042 0.20 -0.3 200,280 - MPMX19_06042 0.20 -0.9 200,280 - MPMX19_06042 0.20 -0.7 200,318 + MPMX19_06042 0.25 +0.1 200,318 + MPMX19_06042 0.25 -0.1 200,318 + MPMX19_06042 0.25 -0.4 200,318 + MPMX19_06042 0.25 -0.3 200,318 + MPMX19_06042 0.25 +0.4 200,318 + MPMX19_06042 0.25 +1.0 200,318 + MPMX19_06042 0.25 +2.6 200,319 - MPMX19_06042 0.26 +0.4 200,319 - MPMX19_06042 0.26 -0.0 200,319 - MPMX19_06042 0.26 -1.1 200,319 - MPMX19_06042 0.26 +0.4 200,319 - MPMX19_06042 0.26 -1.2 200,319 - MPMX19_06042 0.26 -0.8 200,319 - MPMX19_06042 0.26 +0.1 200,760 + -0.6 200,760 + +1.6 200,760 + -1.8 200,760 + -0.1 200,760 + +0.2 200,760 + +1.1 200,761 - -0.3 200,885 + -0.1 200,886 - +1.0 200,920 + -2.4 200,920 + +1.0 200,920 + -0.9 200,920 + -0.6 200,920 + -2.7 200,920 + -0.8 200,920 + -0.1 200,920 + -0.6 200,920 + -0.9 200,920 + +1.0 200,920 + -1.2 200,920 + -1.0 200,920 + -0.4 200,921 - -1.0 200,921 - -0.4 200,921 - -0.0 200,921 - +0.4 200,921 - -1.0 200,921 - +0.4 200,921 - +1.6 200,921 - -1.2 200,921 - +1.6 200,921 - -0.4 200,921 - +0.7 200,921 - -0.3 200,921 - -0.7 200,921 - -0.3 200,921 - -0.9 200,921 - -0.4 200,921 - -1.1 200,921 - -0.1 200,925 + -1.0 200,925 + -1.4 200,925 + -0.8 200,950 + -1.0 200,950 + +0.6 200,950 + -0.0 200,951 - -0.8 200,951 - -2.2 200,951 - -0.6 201,045 - -1.1 201,045 - -1.3 201,045 - -1.4 201,065 - -0.8 201,065 - -1.2 201,157 + -0.6 201,157 + -0.2 201,157 + -0.4 201,157 + +0.2 201,157 + +0.2 201,157 + -0.8 201,157 + -0.9 201,157 + +0.1 201,157 + -0.6 201,157 + -0.7 201,157 + +1.6 201,157 + +0.7 201,157 + -0.7 201,157 + -0.1 201,157 + -0.4 201,157 + -2.6 201,157 + -0.4 201,157 + +0.8 201,157 + +0.4 201,157 + -0.2 201,157 + +0.1 201,158 - -1.7 201,158 - +0.6 201,158 - -2.5 201,158 - -0.4 201,158 - -0.4 201,158 - -0.8 201,158 - -1.0 201,158 - -0.7 201,158 - +0.6 201,158 - -0.2 201,158 - -0.2 201,158 - -0.5 201,158 - -0.2 201,158 - -0.1 201,158 - +1.6 201,158 - -1.1 201,158 - -0.4 201,158 - -0.9 201,158 - -1.8 201,158 - -0.2 201,158 - +0.2 201,158 - -0.6 201,159 + -0.2 201,159 + -2.1 201,159 + -0.4 201,159 + -1.0 201,159 + -0.8 201,159 + -0.0 201,159 + -1.1 201,159 + -2.1 201,159 + +1.2 201,159 + +0.6 201,159 + -0.0 201,159 + -0.7 201,159 + -1.7 201,159 + -2.0 201,159 + -0.4 201,160 - +0.8 201,160 - -0.2 201,160 - +0.8 201,160 - +0.2 201,160 - -1.4 201,160 - -0.3 201,160 - -0.5 201,160 - -1.3 201,160 - -0.4 201,160 - -0.0 201,160 - +0.1 201,160 - -0.6 201,160 - -0.0 201,160 - -1.4 201,160 - -0.6 201,195 + -0.4 201,195 + +0.1 201,195 + -2.0 201,195 + +0.1 201,195 + -1.8 201,195 + -1.6 201,196 - +0.3 201,196 - -0.3 201,196 - +1.0 201,196 - -0.4 201,196 - -1.1 201,348 + MPMX19_06043 0.17 -0.0 201,348 + MPMX19_06043 0.17 -0.6 201,348 + MPMX19_06043 0.17 +0.2 201,348 + MPMX19_06043 0.17 -0.9 201,348 + MPMX19_06043 0.17 +0.0 201,349 - MPMX19_06043 0.17 -0.2 201,349 - MPMX19_06043 0.17 +0.3 201,349 - MPMX19_06043 0.17 -0.6 201,349 - MPMX19_06043 0.17 -1.5 201,349 - MPMX19_06043 0.17 +0.2 201,349 - MPMX19_06043 0.17 -1.0 201,351 + MPMX19_06043 0.18 +1.0 201,351 + MPMX19_06043 0.18 -0.9 201,351 + MPMX19_06043 0.18 -0.4 201,351 + MPMX19_06043 0.18 -0.4 201,351 + MPMX19_06043 0.18 -0.6 201,351 + MPMX19_06043 0.18 -0.9 201,351 + MPMX19_06043 0.18 -0.4 201,351 + MPMX19_06043 0.18 -1.0 201,351 + MPMX19_06043 0.18 +0.2 201,351 + MPMX19_06043 0.18 -1.8 201,351 + MPMX19_06043 0.18 -1.1 201,351 + MPMX19_06043 0.18 +0.1 201,351 + MPMX19_06043 0.18 +0.4 201,351 + MPMX19_06043 0.18 +0.8 201,351 + MPMX19_06043 0.18 -1.0 201,351 + MPMX19_06043 0.18 -0.8 201,351 + MPMX19_06043 0.18 +0.7 201,351 + MPMX19_06043 0.18 +0.6 201,351 + MPMX19_06043 0.18 -0.2 201,351 + MPMX19_06043 0.18 -1.6 201,351 + MPMX19_06043 0.18 -0.6 201,351 + MPMX19_06043 0.18 -1.2 201,351 + MPMX19_06043 0.18 -1.2 201,351 + MPMX19_06043 0.18 -0.4 201,351 + MPMX19_06043 0.18 -1.2 201,351 + MPMX19_06043 0.18 -0.7 201,351 + MPMX19_06043 0.18 -0.6 201,351 + MPMX19_06043 0.18 -0.0 201,351 + MPMX19_06043 0.18 -0.0 201,351 + MPMX19_06043 0.18 -2.5 201,351 + MPMX19_06043 0.18 +0.0 201,352 - MPMX19_06043 0.18 -0.4 201,352 - MPMX19_06043 0.18 -0.9 201,352 - MPMX19_06043 0.18 -0.9 201,352 - MPMX19_06043 0.18 +0.2 201,352 - MPMX19_06043 0.18 -2.2 201,352 - MPMX19_06043 0.18 -0.9 201,352 - MPMX19_06043 0.18 -0.9 201,352 - MPMX19_06043 0.18 -0.9 201,352 - MPMX19_06043 0.18 +0.2 201,352 - MPMX19_06043 0.18 +1.0 201,352 - MPMX19_06043 0.18 -0.0 201,352 - MPMX19_06043 0.18 +0.6 201,352 - MPMX19_06043 0.18 -0.6 201,352 - MPMX19_06043 0.18 -1.0 201,352 - MPMX19_06043 0.18 -1.4 201,352 - MPMX19_06043 0.18 +0.2 201,352 - MPMX19_06043 0.18 -0.0 201,352 - MPMX19_06043 0.18 -2.1 201,352 - MPMX19_06043 0.18 -1.5 201,352 - MPMX19_06043 0.18 +1.0 201,352 - MPMX19_06043 0.18 -0.8 201,352 - MPMX19_06043 0.18 +0.3 201,352 - MPMX19_06043 0.18 -0.8 201,352 - MPMX19_06043 0.18 -0.2 201,352 - MPMX19_06043 0.18 -0.6 201,352 - MPMX19_06043 0.18 -1.4 201,352 - MPMX19_06043 0.18 -1.0 201,543 + MPMX19_06043 0.41 -0.5 201,651 + MPMX19_06043 0.55 -0.6 201,651 + MPMX19_06043 0.55 +1.6 201,651 + MPMX19_06043 0.55 -0.1 201,651 + MPMX19_06043 0.55 -0.0 201,651 + MPMX19_06043 0.55 -0.4 201,651 + MPMX19_06043 0.55 +0.1 201,651 + MPMX19_06043 0.55 -0.9 201,651 + MPMX19_06043 0.55 +1.0 201,652 - MPMX19_06043 0.55 -0.1 201,652 - MPMX19_06043 0.55 -0.4 201,652 - MPMX19_06043 0.55 -0.5 201,652 - MPMX19_06043 0.55 -0.6 201,652 - MPMX19_06043 0.55 -0.0 201,652 - MPMX19_06043 0.55 -0.0 201,652 - MPMX19_06043 0.55 -0.8 201,652 - MPMX19_06043 0.55 -0.8 201,652 - MPMX19_06043 0.55 -1.0 201,652 - MPMX19_06043 0.55 -0.7
Or see this region's nucleotide sequence