Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05860 and MPMX19_05861 overlap by 1 nucleotides MPMX19_05861 and MPMX19_05862 are separated by 5 nucleotides MPMX19_05862 and MPMX19_05863 are separated by 23 nucleotides MPMX19_05863 and MPMX19_05864 are separated by 5 nucleotides
MPMX19_05860: MPMX19_05860 - 3-oxoadipate enol-lactonase 2, at 595,253 to 596,050
_05860
MPMX19_05861: MPMX19_05861 - hypothetical protein, at 596,050 to 596,463
_05861
MPMX19_05862: MPMX19_05862 - 3-carboxy-cis,cis-muconate cycloisomerase, at 596,469 to 597,839
_05862
MPMX19_05863: MPMX19_05863 - Protocatechuate 3,4-dioxygenase beta chain, at 597,863 to 598,585
_05863
MPMX19_05864: MPMX19_05864 - Protocatechuate 3,4-dioxygenase alpha chain, at 598,591 to 599,148
_05864
Position (kb) 596
597
598 Strain fitness (log2 ratio) -2
-1
0
1
2 at 595.769 kb on + strand, within MPMX19_05860 at 595.769 kb on + strand, within MPMX19_05860 at 595.770 kb on - strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 596.083 kb on + strand at 596.083 kb on + strand at 596.083 kb on + strand at 596.083 kb on + strand at 596.083 kb on + strand at 596.083 kb on + strand at 596.084 kb on - strand at 596.084 kb on - strand at 596.084 kb on - strand at 596.084 kb on - strand at 596.084 kb on - strand at 596.084 kb on - strand at 596.370 kb on + strand, within MPMX19_05861 at 596.370 kb on + strand, within MPMX19_05861 at 596.371 kb on - strand, within MPMX19_05861 at 596.371 kb on - strand, within MPMX19_05861 at 596.371 kb on - strand, within MPMX19_05861 at 596.371 kb on - strand, within MPMX19_05861 at 596.371 kb on - strand, within MPMX19_05861 at 596.371 kb on - strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.374 kb on + strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.375 kb on - strand, within MPMX19_05861 at 596.406 kb on - strand, within MPMX19_05861 at 596.425 kb on + strand at 596.425 kb on + strand at 596.426 kb on - strand at 596.426 kb on - strand at 596.426 kb on - strand at 596.554 kb on + strand at 596.554 kb on + strand at 596.554 kb on + strand at 596.554 kb on + strand at 596.554 kb on + strand at 596.554 kb on + strand at 596.555 kb on - strand at 596.555 kb on - strand at 596.555 kb on - strand at 596.664 kb on + strand, within MPMX19_05862 at 596.664 kb on + strand, within MPMX19_05862 at 596.664 kb on + strand, within MPMX19_05862 at 596.664 kb on + strand, within MPMX19_05862 at 596.665 kb on - strand, within MPMX19_05862 at 596.775 kb on + strand, within MPMX19_05862 at 596.775 kb on + strand, within MPMX19_05862 at 596.775 kb on + strand, within MPMX19_05862 at 596.776 kb on - strand, within MPMX19_05862 at 596.776 kb on - strand, within MPMX19_05862 at 596.776 kb on - strand, within MPMX19_05862 at 596.776 kb on - strand, within MPMX19_05862 at 596.776 kb on - strand, within MPMX19_05862 at 596.776 kb on - strand, within MPMX19_05862 at 596.776 kb on - strand, within MPMX19_05862 at 597.766 kb on - strand at 597.766 kb on - strand at 597.766 kb on - strand at 597.766 kb on - strand at 597.929 kb on + strand at 597.929 kb on + strand at 597.929 kb on + strand at 597.929 kb on + strand at 597.929 kb on + strand at 597.929 kb on + strand at 597.930 kb on - strand at 597.930 kb on - strand at 597.930 kb on - strand at 597.930 kb on - strand at 597.930 kb on - strand at 597.944 kb on + strand, within MPMX19_05863 at 597.944 kb on + strand, within MPMX19_05863 at 597.944 kb on + strand, within MPMX19_05863 at 597.945 kb on - strand, within MPMX19_05863 at 597.945 kb on - strand, within MPMX19_05863 at 597.945 kb on - strand, within MPMX19_05863 at 598.196 kb on + strand, within MPMX19_05863 at 598.196 kb on + strand, within MPMX19_05863 at 598.196 kb on + strand, within MPMX19_05863 at 598.196 kb on + strand, within MPMX19_05863 at 598.196 kb on + strand, within MPMX19_05863 at 598.197 kb on - strand, within MPMX19_05863 at 598.197 kb on - strand, within MPMX19_05863 at 598.197 kb on - strand, within MPMX19_05863 at 598.197 kb on - strand, within MPMX19_05863 at 598.313 kb on + strand, within MPMX19_05863 at 598.313 kb on + strand, within MPMX19_05863 at 598.313 kb on + strand, within MPMX19_05863 at 598.313 kb on + strand, within MPMX19_05863 at 598.314 kb on - strand, within MPMX19_05863 at 598.314 kb on - strand, within MPMX19_05863 at 598.409 kb on + strand, within MPMX19_05863 at 598.409 kb on + strand, within MPMX19_05863 at 598.409 kb on + strand, within MPMX19_05863 at 598.409 kb on + strand, within MPMX19_05863 at 598.410 kb on - strand, within MPMX19_05863 at 598.410 kb on - strand, within MPMX19_05863 at 598.410 kb on - strand, within MPMX19_05863 at 598.410 kb on - strand, within MPMX19_05863 at 598.410 kb on - strand, within MPMX19_05863 at 598.410 kb on - strand, within MPMX19_05863 at 598.410 kb on - strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.448 kb on + strand, within MPMX19_05863 at 598.449 kb on - strand, within MPMX19_05863 at 598.449 kb on - strand, within MPMX19_05863 at 598.449 kb on - strand, within MPMX19_05863 at 598.449 kb on - strand, within MPMX19_05863 at 598.449 kb on - strand, within MPMX19_05863 at 598.449 kb on - strand, within MPMX19_05863 at 598.449 kb on - strand, within MPMX19_05863 at 598.449 kb on - strand, within MPMX19_05863 at 598.449 kb on - strand, within MPMX19_05863 at 598.533 kb on - strand at 598.636 kb on + strand at 598.637 kb on - strand at 598.637 kb on - strand at 598.645 kb on + strand at 598.646 kb on - strand at 598.646 kb on - strand at 598.666 kb on + strand, within MPMX19_05864 at 598.747 kb on + strand, within MPMX19_05864 at 598.747 kb on + strand, within MPMX19_05864 at 598.747 kb on + strand, within MPMX19_05864 at 598.747 kb on + strand, within MPMX19_05864 at 598.747 kb on + strand, within MPMX19_05864 at 598.747 kb on + strand, within MPMX19_05864 at 598.747 kb on + strand, within MPMX19_05864 at 598.747 kb on + strand, within MPMX19_05864 at 598.748 kb on - strand, within MPMX19_05864 at 598.748 kb on - strand, within MPMX19_05864 at 598.748 kb on - strand, within MPMX19_05864 at 598.748 kb on - strand, within MPMX19_05864 at 598.748 kb on - strand, within MPMX19_05864
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 595,769 + MPMX19_05860 0.65 +0.4 595,769 + MPMX19_05860 0.65 +0.9 595,770 - MPMX19_05860 0.65 -0.1 595,805 + MPMX19_05860 0.69 +0.3 595,805 + MPMX19_05860 0.69 +1.8 595,805 + MPMX19_05860 0.69 +0.5 595,805 + MPMX19_05860 0.69 -0.4 595,805 + MPMX19_05860 0.69 +0.5 595,805 + MPMX19_05860 0.69 -0.3 595,805 + MPMX19_05860 0.69 +1.8 595,805 + MPMX19_05860 0.69 -2.2 595,805 + MPMX19_05860 0.69 -0.5 595,805 + MPMX19_05860 0.69 -1.3 595,805 + MPMX19_05860 0.69 -0.2 595,805 + MPMX19_05860 0.69 -0.2 595,805 + MPMX19_05860 0.69 -0.5 595,806 - MPMX19_05860 0.69 -0.7 595,806 - MPMX19_05860 0.69 -0.2 595,806 - MPMX19_05860 0.69 -1.7 595,806 - MPMX19_05860 0.69 -1.0 595,806 - MPMX19_05860 0.69 +0.2 595,806 - MPMX19_05860 0.69 +0.1 595,806 - MPMX19_05860 0.69 +0.7 595,806 - MPMX19_05860 0.69 +0.5 595,806 - MPMX19_05860 0.69 -1.2 595,806 - MPMX19_05860 0.69 -0.9 595,806 - MPMX19_05860 0.69 +0.7 595,806 - MPMX19_05860 0.69 +0.7 596,083 + -0.1 596,083 + -1.1 596,083 + -1.2 596,083 + -0.3 596,083 + -1.3 596,083 + +0.0 596,084 - -0.5 596,084 - -0.5 596,084 - -1.3 596,084 - -0.5 596,084 - +0.5 596,084 - -2.3 596,370 + MPMX19_05861 0.77 -0.1 596,370 + MPMX19_05861 0.77 -0.3 596,371 - MPMX19_05861 0.78 +0.1 596,371 - MPMX19_05861 0.78 -0.8 596,371 - MPMX19_05861 0.78 -1.1 596,371 - MPMX19_05861 0.78 -0.7 596,371 - MPMX19_05861 0.78 +1.9 596,371 - MPMX19_05861 0.78 -0.1 596,374 + MPMX19_05861 0.78 +1.0 596,374 + MPMX19_05861 0.78 -0.1 596,374 + MPMX19_05861 0.78 +0.2 596,374 + MPMX19_05861 0.78 -0.7 596,374 + MPMX19_05861 0.78 -0.1 596,374 + MPMX19_05861 0.78 +0.8 596,374 + MPMX19_05861 0.78 -1.4 596,374 + MPMX19_05861 0.78 -0.5 596,374 + MPMX19_05861 0.78 -1.4 596,374 + MPMX19_05861 0.78 -0.1 596,374 + MPMX19_05861 0.78 -0.8 596,374 + MPMX19_05861 0.78 -0.9 596,374 + MPMX19_05861 0.78 -0.2 596,374 + MPMX19_05861 0.78 -0.3 596,374 + MPMX19_05861 0.78 -2.5 596,374 + MPMX19_05861 0.78 -0.5 596,374 + MPMX19_05861 0.78 +0.8 596,374 + MPMX19_05861 0.78 -0.3 596,374 + MPMX19_05861 0.78 -1.3 596,374 + MPMX19_05861 0.78 -1.1 596,374 + MPMX19_05861 0.78 -0.5 596,374 + MPMX19_05861 0.78 -0.5 596,374 + MPMX19_05861 0.78 -0.5 596,374 + MPMX19_05861 0.78 +0.6 596,374 + MPMX19_05861 0.78 -0.5 596,374 + MPMX19_05861 0.78 -0.8 596,374 + MPMX19_05861 0.78 -1.1 596,374 + MPMX19_05861 0.78 +1.5 596,374 + MPMX19_05861 0.78 -1.2 596,374 + MPMX19_05861 0.78 +1.5 596,374 + MPMX19_05861 0.78 -0.3 596,374 + MPMX19_05861 0.78 +0.6 596,374 + MPMX19_05861 0.78 -1.6 596,375 - MPMX19_05861 0.79 -1.4 596,375 - MPMX19_05861 0.79 -0.1 596,375 - MPMX19_05861 0.79 -2.0 596,375 - MPMX19_05861 0.79 -1.8 596,375 - MPMX19_05861 0.79 -2.0 596,375 - MPMX19_05861 0.79 -0.7 596,375 - MPMX19_05861 0.79 -0.5 596,375 - MPMX19_05861 0.79 -0.1 596,375 - MPMX19_05861 0.79 -1.7 596,375 - MPMX19_05861 0.79 -0.9 596,375 - MPMX19_05861 0.79 +1.1 596,375 - MPMX19_05861 0.79 -0.5 596,375 - MPMX19_05861 0.79 -0.7 596,375 - MPMX19_05861 0.79 -0.7 596,375 - MPMX19_05861 0.79 -1.2 596,375 - MPMX19_05861 0.79 +0.4 596,375 - MPMX19_05861 0.79 -0.6 596,375 - MPMX19_05861 0.79 -0.5 596,375 - MPMX19_05861 0.79 -1.9 596,375 - MPMX19_05861 0.79 -0.5 596,406 - MPMX19_05861 0.86 -0.4 596,425 + +0.7 596,425 + -2.0 596,426 - +0.2 596,426 - -1.9 596,426 - +0.3 596,554 + +0.8 596,554 + -0.5 596,554 + -0.1 596,554 + +0.1 596,554 + -1.7 596,554 + -1.2 596,555 - -1.7 596,555 - +0.2 596,555 - -0.7 596,664 + MPMX19_05862 0.14 -0.5 596,664 + MPMX19_05862 0.14 -1.8 596,664 + MPMX19_05862 0.14 -0.8 596,664 + MPMX19_05862 0.14 -0.6 596,665 - MPMX19_05862 0.14 -2.0 596,775 + MPMX19_05862 0.22 -1.1 596,775 + MPMX19_05862 0.22 -1.3 596,775 + MPMX19_05862 0.22 -0.3 596,776 - MPMX19_05862 0.22 -1.1 596,776 - MPMX19_05862 0.22 +1.3 596,776 - MPMX19_05862 0.22 -0.7 596,776 - MPMX19_05862 0.22 -1.2 596,776 - MPMX19_05862 0.22 -2.0 596,776 - MPMX19_05862 0.22 -0.5 596,776 - MPMX19_05862 0.22 -1.6 597,766 - -0.8 597,766 - -1.3 597,766 - +0.7 597,766 - -0.5 597,929 + -2.2 597,929 + +0.7 597,929 + -0.8 597,929 + -1.1 597,929 + -0.3 597,929 + -0.3 597,930 - -2.6 597,930 - +0.2 597,930 - -1.5 597,930 - +0.2 597,930 - -2.2 597,944 + MPMX19_05863 0.11 +0.1 597,944 + MPMX19_05863 0.11 -0.1 597,944 + MPMX19_05863 0.11 +0.3 597,945 - MPMX19_05863 0.11 -0.6 597,945 - MPMX19_05863 0.11 -0.3 597,945 - MPMX19_05863 0.11 -1.3 598,196 + MPMX19_05863 0.46 -1.4 598,196 + MPMX19_05863 0.46 -0.6 598,196 + MPMX19_05863 0.46 -0.2 598,196 + MPMX19_05863 0.46 -0.7 598,196 + MPMX19_05863 0.46 +0.2 598,197 - MPMX19_05863 0.46 -1.3 598,197 - MPMX19_05863 0.46 -0.3 598,197 - MPMX19_05863 0.46 -1.7 598,197 - MPMX19_05863 0.46 -1.5 598,313 + MPMX19_05863 0.62 -1.9 598,313 + MPMX19_05863 0.62 -1.1 598,313 + MPMX19_05863 0.62 -1.0 598,313 + MPMX19_05863 0.62 +0.2 598,314 - MPMX19_05863 0.62 -0.7 598,314 - MPMX19_05863 0.62 -0.4 598,409 + MPMX19_05863 0.76 -0.6 598,409 + MPMX19_05863 0.76 -1.2 598,409 + MPMX19_05863 0.76 -1.8 598,409 + MPMX19_05863 0.76 +0.1 598,410 - MPMX19_05863 0.76 -0.5 598,410 - MPMX19_05863 0.76 +0.2 598,410 - MPMX19_05863 0.76 -0.3 598,410 - MPMX19_05863 0.76 +2.3 598,410 - MPMX19_05863 0.76 +0.1 598,410 - MPMX19_05863 0.76 -1.6 598,410 - MPMX19_05863 0.76 +0.5 598,448 + MPMX19_05863 0.81 -0.3 598,448 + MPMX19_05863 0.81 -0.3 598,448 + MPMX19_05863 0.81 +0.3 598,448 + MPMX19_05863 0.81 -0.4 598,448 + MPMX19_05863 0.81 -1.4 598,448 + MPMX19_05863 0.81 -1.2 598,448 + MPMX19_05863 0.81 -0.7 598,448 + MPMX19_05863 0.81 -1.2 598,448 + MPMX19_05863 0.81 -0.3 598,448 + MPMX19_05863 0.81 +0.5 598,448 + MPMX19_05863 0.81 +0.7 598,448 + MPMX19_05863 0.81 -0.1 598,448 + MPMX19_05863 0.81 -1.3 598,448 + MPMX19_05863 0.81 -0.5 598,448 + MPMX19_05863 0.81 -0.5 598,449 - MPMX19_05863 0.81 -1.1 598,449 - MPMX19_05863 0.81 -0.1 598,449 - MPMX19_05863 0.81 -0.6 598,449 - MPMX19_05863 0.81 -0.9 598,449 - MPMX19_05863 0.81 -0.1 598,449 - MPMX19_05863 0.81 -0.7 598,449 - MPMX19_05863 0.81 -1.8 598,449 - MPMX19_05863 0.81 -0.3 598,449 - MPMX19_05863 0.81 -0.7 598,533 - -0.4 598,636 + +1.2 598,637 - -1.6 598,637 - -0.8 598,645 + -1.5 598,646 - +0.5 598,646 - -0.5 598,666 + MPMX19_05864 0.13 -2.6 598,747 + MPMX19_05864 0.28 -1.1 598,747 + MPMX19_05864 0.28 -1.5 598,747 + MPMX19_05864 0.28 -1.1 598,747 + MPMX19_05864 0.28 +0.2 598,747 + MPMX19_05864 0.28 -1.6 598,747 + MPMX19_05864 0.28 +0.7 598,747 + MPMX19_05864 0.28 -0.8 598,747 + MPMX19_05864 0.28 +0.2 598,748 - MPMX19_05864 0.28 -0.5 598,748 - MPMX19_05864 0.28 -1.5 598,748 - MPMX19_05864 0.28 -1.1 598,748 - MPMX19_05864 0.28 -1.1 598,748 - MPMX19_05864 0.28 -0.5
Or see this region's nucleotide sequence