Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05857 and MPMX19_05858 overlap by 1 nucleotides MPMX19_05858 and MPMX19_05859 are separated by 4 nucleotides MPMX19_05859 and MPMX19_05860 are separated by 48 nucleotides MPMX19_05860 and MPMX19_05861 overlap by 1 nucleotides
MPMX19_05857: MPMX19_05857 - 3-oxoadipate CoA-transferase subunit A, at 592,334 to 593,206
_05857
MPMX19_05858: MPMX19_05858 - 3-oxoadipate CoA-transferase subunit B, at 593,206 to 594,000
_05858
MPMX19_05859: MPMX19_05859 - Beta-ketoadipyl-CoA thiolase, at 594,005 to 595,204
_05859
MPMX19_05860: MPMX19_05860 - 3-oxoadipate enol-lactonase 2, at 595,253 to 596,050
_05860
MPMX19_05861: MPMX19_05861 - hypothetical protein, at 596,050 to 596,463
_05861
Position (kb) 594
595
596 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 593.019 kb on - strand, within MPMX19_05857 at 593.019 kb on - strand, within MPMX19_05857 at 593.019 kb on - strand, within MPMX19_05857 at 593.027 kb on + strand, within MPMX19_05857 at 593.027 kb on + strand, within MPMX19_05857 at 593.028 kb on - strand, within MPMX19_05857 at 593.028 kb on - strand, within MPMX19_05857 at 593.028 kb on - strand, within MPMX19_05857 at 593.028 kb on - strand, within MPMX19_05857 at 593.039 kb on + strand, within MPMX19_05857 at 593.039 kb on + strand, within MPMX19_05857 at 593.040 kb on - strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.063 kb on + strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.064 kb on - strand, within MPMX19_05857 at 593.365 kb on + strand, within MPMX19_05858 at 593.365 kb on + strand, within MPMX19_05858 at 593.365 kb on + strand, within MPMX19_05858 at 593.365 kb on + strand, within MPMX19_05858 at 593.366 kb on - strand, within MPMX19_05858 at 593.366 kb on - strand, within MPMX19_05858 at 593.366 kb on - strand, within MPMX19_05858 at 593.366 kb on - strand, within MPMX19_05858 at 593.366 kb on - strand, within MPMX19_05858 at 593.366 kb on - strand, within MPMX19_05858 at 593.366 kb on - strand, within MPMX19_05858 at 593.366 kb on - strand, within MPMX19_05858 at 593.477 kb on - strand, within MPMX19_05858 at 593.569 kb on + strand, within MPMX19_05858 at 593.569 kb on + strand, within MPMX19_05858 at 593.569 kb on + strand, within MPMX19_05858 at 593.569 kb on + strand, within MPMX19_05858 at 593.569 kb on + strand, within MPMX19_05858 at 593.569 kb on + strand, within MPMX19_05858 at 593.569 kb on + strand, within MPMX19_05858 at 593.570 kb on - strand, within MPMX19_05858 at 593.570 kb on - strand, within MPMX19_05858 at 593.570 kb on - strand, within MPMX19_05858 at 593.570 kb on - strand, within MPMX19_05858 at 593.570 kb on - strand, within MPMX19_05858 at 593.570 kb on - strand, within MPMX19_05858 at 593.643 kb on + strand, within MPMX19_05858 at 593.643 kb on + strand, within MPMX19_05858 at 593.643 kb on + strand, within MPMX19_05858 at 593.643 kb on + strand, within MPMX19_05858 at 593.643 kb on + strand, within MPMX19_05858 at 593.643 kb on + strand, within MPMX19_05858 at 593.643 kb on + strand, within MPMX19_05858 at 593.644 kb on - strand, within MPMX19_05858 at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.003 kb on + strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.004 kb on - strand at 594.017 kb on + strand at 594.017 kb on + strand at 594.018 kb on - strand at 594.018 kb on - strand at 594.018 kb on - strand at 594.018 kb on - strand at 594.018 kb on - strand at 594.018 kb on - strand at 594.018 kb on - strand at 594.053 kb on + strand at 594.053 kb on + strand at 594.054 kb on - strand at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.164 kb on + strand, within MPMX19_05859 at 594.165 kb on - strand, within MPMX19_05859 at 594.165 kb on - strand, within MPMX19_05859 at 594.165 kb on - strand, within MPMX19_05859 at 594.165 kb on - strand, within MPMX19_05859 at 594.165 kb on - strand, within MPMX19_05859 at 594.165 kb on - strand, within MPMX19_05859 at 594.165 kb on - strand, within MPMX19_05859 at 594.165 kb on - strand, within MPMX19_05859 at 594.165 kb on - strand, within MPMX19_05859 at 594.476 kb on + strand, within MPMX19_05859 at 594.476 kb on + strand, within MPMX19_05859 at 594.476 kb on + strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 594.477 kb on - strand, within MPMX19_05859 at 595.202 kb on + strand at 595.202 kb on + strand at 595.203 kb on - strand at 595.203 kb on - strand at 595.203 kb on - strand at 595.203 kb on - strand at 595.203 kb on - strand at 595.289 kb on + strand at 595.289 kb on + strand at 595.289 kb on + strand at 595.289 kb on + strand at 595.289 kb on + strand at 595.289 kb on + strand at 595.290 kb on - strand at 595.409 kb on + strand, within MPMX19_05860 at 595.409 kb on + strand, within MPMX19_05860 at 595.409 kb on + strand, within MPMX19_05860 at 595.409 kb on + strand, within MPMX19_05860 at 595.410 kb on - strand, within MPMX19_05860 at 595.410 kb on - strand, within MPMX19_05860 at 595.466 kb on + strand, within MPMX19_05860 at 595.769 kb on + strand, within MPMX19_05860 at 595.769 kb on + strand, within MPMX19_05860 at 595.770 kb on - strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.805 kb on + strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 595.806 kb on - strand, within MPMX19_05860 at 596.083 kb on + strand at 596.083 kb on + strand at 596.083 kb on + strand at 596.083 kb on + strand at 596.083 kb on + strand at 596.083 kb on + strand at 596.084 kb on - strand at 596.084 kb on - strand at 596.084 kb on - strand at 596.084 kb on - strand at 596.084 kb on - strand at 596.084 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 593,019 - MPMX19_05857 0.78 +1.1 593,019 - MPMX19_05857 0.78 -0.8 593,019 - MPMX19_05857 0.78 +0.9 593,027 + MPMX19_05857 0.79 +0.1 593,027 + MPMX19_05857 0.79 +0.2 593,028 - MPMX19_05857 0.79 -0.7 593,028 - MPMX19_05857 0.79 -0.4 593,028 - MPMX19_05857 0.79 -0.5 593,028 - MPMX19_05857 0.79 -1.6 593,039 + MPMX19_05857 0.81 -0.1 593,039 + MPMX19_05857 0.81 -1.8 593,040 - MPMX19_05857 0.81 +0.2 593,063 + MPMX19_05857 0.84 +0.2 593,063 + MPMX19_05857 0.84 -0.2 593,063 + MPMX19_05857 0.84 -0.6 593,063 + MPMX19_05857 0.84 -0.9 593,063 + MPMX19_05857 0.84 -0.8 593,063 + MPMX19_05857 0.84 +0.5 593,063 + MPMX19_05857 0.84 +0.2 593,063 + MPMX19_05857 0.84 -2.2 593,063 + MPMX19_05857 0.84 +0.8 593,063 + MPMX19_05857 0.84 -0.7 593,063 + MPMX19_05857 0.84 -0.7 593,063 + MPMX19_05857 0.84 -1.4 593,063 + MPMX19_05857 0.84 -0.3 593,063 + MPMX19_05857 0.84 -1.2 593,063 + MPMX19_05857 0.84 -0.3 593,063 + MPMX19_05857 0.84 -0.9 593,063 + MPMX19_05857 0.84 +0.7 593,063 + MPMX19_05857 0.84 -1.9 593,064 - MPMX19_05857 0.84 +0.1 593,064 - MPMX19_05857 0.84 -0.6 593,064 - MPMX19_05857 0.84 +0.5 593,064 - MPMX19_05857 0.84 -1.1 593,064 - MPMX19_05857 0.84 -0.5 593,064 - MPMX19_05857 0.84 -0.9 593,064 - MPMX19_05857 0.84 -0.4 593,064 - MPMX19_05857 0.84 -2.9 593,064 - MPMX19_05857 0.84 -1.3 593,064 - MPMX19_05857 0.84 -1.1 593,064 - MPMX19_05857 0.84 -0.4 593,064 - MPMX19_05857 0.84 +0.3 593,064 - MPMX19_05857 0.84 -0.9 593,064 - MPMX19_05857 0.84 -1.1 593,064 - MPMX19_05857 0.84 -0.2 593,064 - MPMX19_05857 0.84 +0.5 593,064 - MPMX19_05857 0.84 -1.3 593,064 - MPMX19_05857 0.84 -0.5 593,064 - MPMX19_05857 0.84 +0.4 593,064 - MPMX19_05857 0.84 -0.3 593,064 - MPMX19_05857 0.84 -0.1 593,365 + MPMX19_05858 0.20 -2.8 593,365 + MPMX19_05858 0.20 -1.1 593,365 + MPMX19_05858 0.20 -0.9 593,365 + MPMX19_05858 0.20 -1.1 593,366 - MPMX19_05858 0.20 -0.5 593,366 - MPMX19_05858 0.20 +0.7 593,366 - MPMX19_05858 0.20 -0.3 593,366 - MPMX19_05858 0.20 -2.2 593,366 - MPMX19_05858 0.20 -0.8 593,366 - MPMX19_05858 0.20 +0.3 593,366 - MPMX19_05858 0.20 +1.7 593,366 - MPMX19_05858 0.20 -0.4 593,477 - MPMX19_05858 0.34 -1.3 593,569 + MPMX19_05858 0.46 -1.9 593,569 + MPMX19_05858 0.46 +0.8 593,569 + MPMX19_05858 0.46 -1.2 593,569 + MPMX19_05858 0.46 -0.3 593,569 + MPMX19_05858 0.46 -1.1 593,569 + MPMX19_05858 0.46 -1.3 593,569 + MPMX19_05858 0.46 +0.2 593,570 - MPMX19_05858 0.46 -0.5 593,570 - MPMX19_05858 0.46 -0.8 593,570 - MPMX19_05858 0.46 -0.7 593,570 - MPMX19_05858 0.46 -1.5 593,570 - MPMX19_05858 0.46 +1.3 593,570 - MPMX19_05858 0.46 +0.6 593,643 + MPMX19_05858 0.55 -0.1 593,643 + MPMX19_05858 0.55 -0.9 593,643 + MPMX19_05858 0.55 -0.4 593,643 + MPMX19_05858 0.55 +0.8 593,643 + MPMX19_05858 0.55 -0.5 593,643 + MPMX19_05858 0.55 -0.0 593,643 + MPMX19_05858 0.55 -1.2 593,644 - MPMX19_05858 0.55 +0.9 594,003 + -0.8 594,003 + -1.5 594,003 + +1.8 594,003 + -0.8 594,003 + -0.3 594,003 + -0.5 594,003 + -0.2 594,003 + +0.5 594,003 + -0.2 594,003 + -0.3 594,003 + +0.7 594,003 + -2.5 594,003 + -0.9 594,003 + -0.1 594,003 + -0.9 594,003 + +0.3 594,003 + +0.6 594,003 + -2.1 594,003 + -1.7 594,003 + +0.9 594,003 + +0.5 594,003 + -1.2 594,003 + -1.1 594,003 + -0.5 594,003 + -0.9 594,004 - -0.2 594,004 - +0.6 594,004 - -0.5 594,004 - -0.1 594,004 - -0.5 594,004 - -1.2 594,004 - -0.2 594,004 - +0.5 594,004 - -0.1 594,004 - -2.2 594,004 - -1.4 594,004 - -0.7 594,004 - +0.6 594,004 - -0.1 594,004 - -0.5 594,004 - -1.2 594,004 - +0.5 594,004 - +0.6 594,004 - -0.3 594,017 + -0.5 594,017 + +0.5 594,018 - +0.3 594,018 - -0.3 594,018 - +0.9 594,018 - -1.9 594,018 - -0.1 594,018 - -1.3 594,018 - +0.2 594,053 + -0.1 594,053 + -2.0 594,054 - -1.6 594,164 + MPMX19_05859 0.13 -1.4 594,164 + MPMX19_05859 0.13 -0.7 594,164 + MPMX19_05859 0.13 -2.8 594,164 + MPMX19_05859 0.13 -1.3 594,164 + MPMX19_05859 0.13 -1.7 594,164 + MPMX19_05859 0.13 -1.2 594,164 + MPMX19_05859 0.13 -0.5 594,164 + MPMX19_05859 0.13 -1.2 594,164 + MPMX19_05859 0.13 +0.8 594,164 + MPMX19_05859 0.13 -0.7 594,164 + MPMX19_05859 0.13 -0.2 594,164 + MPMX19_05859 0.13 -1.1 594,164 + MPMX19_05859 0.13 -1.0 594,164 + MPMX19_05859 0.13 -0.4 594,164 + MPMX19_05859 0.13 -1.0 594,165 - MPMX19_05859 0.13 -0.4 594,165 - MPMX19_05859 0.13 -0.9 594,165 - MPMX19_05859 0.13 +1.6 594,165 - MPMX19_05859 0.13 +1.2 594,165 - MPMX19_05859 0.13 -0.3 594,165 - MPMX19_05859 0.13 +1.1 594,165 - MPMX19_05859 0.13 -1.8 594,165 - MPMX19_05859 0.13 -1.2 594,165 - MPMX19_05859 0.13 -3.2 594,476 + MPMX19_05859 0.39 -1.4 594,476 + MPMX19_05859 0.39 -1.3 594,476 + MPMX19_05859 0.39 -2.4 594,477 - MPMX19_05859 0.39 +0.8 594,477 - MPMX19_05859 0.39 -3.2 594,477 - MPMX19_05859 0.39 -2.6 594,477 - MPMX19_05859 0.39 +0.8 594,477 - MPMX19_05859 0.39 -0.8 594,477 - MPMX19_05859 0.39 -1.0 594,477 - MPMX19_05859 0.39 +0.2 594,477 - MPMX19_05859 0.39 -2.0 594,477 - MPMX19_05859 0.39 +0.5 594,477 - MPMX19_05859 0.39 -2.0 595,202 + -0.3 595,202 + -1.2 595,203 - -2.2 595,203 - +0.7 595,203 - -1.6 595,203 - -0.7 595,203 - -0.8 595,289 + +0.1 595,289 + -1.9 595,289 + +1.3 595,289 + -1.0 595,289 + +0.2 595,289 + -0.5 595,290 - -1.5 595,409 + MPMX19_05860 0.20 +0.7 595,409 + MPMX19_05860 0.20 -0.2 595,409 + MPMX19_05860 0.20 -0.4 595,409 + MPMX19_05860 0.20 +0.3 595,410 - MPMX19_05860 0.20 -1.5 595,410 - MPMX19_05860 0.20 +0.2 595,466 + MPMX19_05860 0.27 +0.5 595,769 + MPMX19_05860 0.65 +0.4 595,769 + MPMX19_05860 0.65 +0.9 595,770 - MPMX19_05860 0.65 -0.1 595,805 + MPMX19_05860 0.69 +0.3 595,805 + MPMX19_05860 0.69 +1.8 595,805 + MPMX19_05860 0.69 +0.5 595,805 + MPMX19_05860 0.69 -0.4 595,805 + MPMX19_05860 0.69 +0.5 595,805 + MPMX19_05860 0.69 -0.3 595,805 + MPMX19_05860 0.69 +1.8 595,805 + MPMX19_05860 0.69 -2.2 595,805 + MPMX19_05860 0.69 -0.5 595,805 + MPMX19_05860 0.69 -1.3 595,805 + MPMX19_05860 0.69 -0.2 595,805 + MPMX19_05860 0.69 -0.2 595,805 + MPMX19_05860 0.69 -0.5 595,806 - MPMX19_05860 0.69 -0.7 595,806 - MPMX19_05860 0.69 -0.2 595,806 - MPMX19_05860 0.69 -1.7 595,806 - MPMX19_05860 0.69 -1.0 595,806 - MPMX19_05860 0.69 +0.2 595,806 - MPMX19_05860 0.69 +0.1 595,806 - MPMX19_05860 0.69 +0.7 595,806 - MPMX19_05860 0.69 +0.5 595,806 - MPMX19_05860 0.69 -1.2 595,806 - MPMX19_05860 0.69 -0.9 595,806 - MPMX19_05860 0.69 +0.7 595,806 - MPMX19_05860 0.69 +0.7 596,083 + -0.1 596,083 + -1.1 596,083 + -1.2 596,083 + -0.3 596,083 + -1.3 596,083 + +0.0 596,084 - -0.5 596,084 - -0.5 596,084 - -1.3 596,084 - -0.5 596,084 - +0.5 596,084 - -2.3
Or see this region's nucleotide sequence