Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05834 and MPMX19_05835 are separated by 251 nucleotides MPMX19_05835 and MPMX19_05836 are separated by 219 nucleotides
MPMX19_05834: MPMX19_05834 - Hydrogen peroxide-inducible genes activator, at 565,070 to 565,981
_05834
MPMX19_05835: MPMX19_05835 - Alkyl hydroperoxide reductase C, at 566,233 to 566,796
_05835
MPMX19_05836: MPMX19_05836 - Alkyl hydroperoxide reductase subunit F, at 567,016 to 568,806
_05836
Position (kb) 566
567 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 565.602 kb on + strand, within MPMX19_05834 at 565.602 kb on + strand, within MPMX19_05834 at 565.602 kb on + strand, within MPMX19_05834 at 565.602 kb on + strand, within MPMX19_05834 at 565.603 kb on - strand, within MPMX19_05834 at 565.603 kb on - strand, within MPMX19_05834 at 565.947 kb on + strand at 565.947 kb on + strand at 565.948 kb on - strand at 565.948 kb on - strand at 565.989 kb on + strand at 566.055 kb on + strand at 566.055 kb on + strand at 566.055 kb on + strand at 566.056 kb on - strand at 566.146 kb on + strand at 566.146 kb on + strand at 566.146 kb on + strand at 566.146 kb on + strand at 566.146 kb on + strand at 566.146 kb on + strand at 566.147 kb on - strand at 566.147 kb on - strand at 566.179 kb on + strand at 566.256 kb on + strand at 566.257 kb on - strand at 566.257 kb on - strand at 566.278 kb on + strand at 566.279 kb on - strand at 566.404 kb on + strand, within MPMX19_05835 at 566.404 kb on + strand, within MPMX19_05835 at 566.404 kb on + strand, within MPMX19_05835 at 566.404 kb on + strand, within MPMX19_05835 at 566.404 kb on + strand, within MPMX19_05835 at 566.437 kb on + strand, within MPMX19_05835 at 566.437 kb on + strand, within MPMX19_05835 at 566.437 kb on + strand, within MPMX19_05835 at 566.438 kb on - strand, within MPMX19_05835 at 566.438 kb on - strand, within MPMX19_05835 at 566.438 kb on - strand, within MPMX19_05835 at 566.438 kb on - strand, within MPMX19_05835 at 566.438 kb on - strand, within MPMX19_05835 at 566.438 kb on - strand, within MPMX19_05835 at 566.438 kb on - strand, within MPMX19_05835 at 566.440 kb on - strand, within MPMX19_05835 at 566.512 kb on + strand, within MPMX19_05835 at 566.512 kb on + strand, within MPMX19_05835 at 566.512 kb on + strand, within MPMX19_05835 at 566.512 kb on + strand, within MPMX19_05835 at 566.513 kb on - strand, within MPMX19_05835 at 566.513 kb on - strand, within MPMX19_05835 at 566.513 kb on - strand, within MPMX19_05835 at 566.701 kb on + strand, within MPMX19_05835 at 566.701 kb on + strand, within MPMX19_05835 at 566.701 kb on + strand, within MPMX19_05835 at 566.701 kb on + strand, within MPMX19_05835 at 566.701 kb on + strand, within MPMX19_05835 at 566.701 kb on + strand, within MPMX19_05835 at 566.701 kb on + strand, within MPMX19_05835 at 566.701 kb on + strand, within MPMX19_05835 at 566.701 kb on + strand, within MPMX19_05835 at 566.702 kb on - strand, within MPMX19_05835 at 566.702 kb on - strand, within MPMX19_05835 at 566.702 kb on - strand, within MPMX19_05835 at 566.702 kb on - strand, within MPMX19_05835 at 566.702 kb on - strand, within MPMX19_05835 at 566.702 kb on - strand, within MPMX19_05835 at 566.702 kb on - strand, within MPMX19_05835 at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.794 kb on + strand at 566.795 kb on - strand at 566.795 kb on - strand at 566.795 kb on - strand at 566.795 kb on - strand at 566.795 kb on - strand at 566.795 kb on - strand at 566.795 kb on - strand at 566.795 kb on - strand at 566.807 kb on + strand at 566.807 kb on + strand at 566.807 kb on + strand at 566.808 kb on - strand at 566.895 kb on + strand at 566.896 kb on - strand at 566.896 kb on - strand at 566.933 kb on - strand at 567.164 kb on - strand at 567.164 kb on - strand at 567.164 kb on - strand at 567.164 kb on - strand at 567.247 kb on + strand, within MPMX19_05836 at 567.247 kb on + strand, within MPMX19_05836 at 567.247 kb on + strand, within MPMX19_05836 at 567.247 kb on + strand, within MPMX19_05836 at 567.247 kb on + strand, within MPMX19_05836 at 567.247 kb on + strand, within MPMX19_05836 at 567.247 kb on + strand, within MPMX19_05836 at 567.247 kb on + strand, within MPMX19_05836 at 567.248 kb on - strand, within MPMX19_05836 at 567.248 kb on - strand, within MPMX19_05836 at 567.248 kb on - strand, within MPMX19_05836 at 567.248 kb on - strand, within MPMX19_05836 at 567.248 kb on - strand, within MPMX19_05836 at 567.248 kb on - strand, within MPMX19_05836 at 567.248 kb on - strand, within MPMX19_05836 at 567.248 kb on - strand, within MPMX19_05836 at 567.248 kb on - strand, within MPMX19_05836 at 567.577 kb on + strand, within MPMX19_05836 at 567.577 kb on + strand, within MPMX19_05836 at 567.578 kb on - strand, within MPMX19_05836 at 567.578 kb on - strand, within MPMX19_05836 at 567.578 kb on - strand, within MPMX19_05836 at 567.578 kb on - strand, within MPMX19_05836
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 565,602 + MPMX19_05834 0.58 -0.5 565,602 + MPMX19_05834 0.58 -1.1 565,602 + MPMX19_05834 0.58 -2.1 565,602 + MPMX19_05834 0.58 -1.3 565,603 - MPMX19_05834 0.58 -1.2 565,603 - MPMX19_05834 0.58 -1.7 565,947 + -1.7 565,947 + -0.7 565,948 - -1.7 565,948 - -1.1 565,989 + -2.8 566,055 + -0.7 566,055 + -0.3 566,055 + -2.9 566,056 - +0.2 566,146 + -0.8 566,146 + +0.3 566,146 + -2.5 566,146 + -1.1 566,146 + +0.8 566,146 + -0.6 566,147 - +1.5 566,147 - -0.6 566,179 + -0.9 566,256 + -1.1 566,257 - -2.3 566,257 - +0.9 566,278 + -0.1 566,279 - -1.2 566,404 + MPMX19_05835 0.30 +0.4 566,404 + MPMX19_05835 0.30 -0.7 566,404 + MPMX19_05835 0.30 -1.5 566,404 + MPMX19_05835 0.30 -0.7 566,404 + MPMX19_05835 0.30 -1.3 566,437 + MPMX19_05835 0.36 -1.2 566,437 + MPMX19_05835 0.36 -1.4 566,437 + MPMX19_05835 0.36 -0.9 566,438 - MPMX19_05835 0.36 -0.8 566,438 - MPMX19_05835 0.36 -0.4 566,438 - MPMX19_05835 0.36 -0.7 566,438 - MPMX19_05835 0.36 -0.3 566,438 - MPMX19_05835 0.36 +0.5 566,438 - MPMX19_05835 0.36 -1.8 566,438 - MPMX19_05835 0.36 -1.3 566,440 - MPMX19_05835 0.37 +1.2 566,512 + MPMX19_05835 0.49 -0.5 566,512 + MPMX19_05835 0.49 -1.8 566,512 + MPMX19_05835 0.49 -1.6 566,512 + MPMX19_05835 0.49 -0.3 566,513 - MPMX19_05835 0.50 -0.1 566,513 - MPMX19_05835 0.50 +1.7 566,513 - MPMX19_05835 0.50 +0.8 566,701 + MPMX19_05835 0.83 +0.5 566,701 + MPMX19_05835 0.83 -0.2 566,701 + MPMX19_05835 0.83 -1.4 566,701 + MPMX19_05835 0.83 -1.5 566,701 + MPMX19_05835 0.83 -0.7 566,701 + MPMX19_05835 0.83 -1.0 566,701 + MPMX19_05835 0.83 -0.3 566,701 + MPMX19_05835 0.83 -0.9 566,701 + MPMX19_05835 0.83 +0.0 566,702 - MPMX19_05835 0.83 -0.1 566,702 - MPMX19_05835 0.83 -0.5 566,702 - MPMX19_05835 0.83 -0.3 566,702 - MPMX19_05835 0.83 +0.3 566,702 - MPMX19_05835 0.83 -1.1 566,702 - MPMX19_05835 0.83 -0.6 566,702 - MPMX19_05835 0.83 -0.3 566,794 + -1.7 566,794 + -0.9 566,794 + -0.3 566,794 + -2.0 566,794 + +0.5 566,794 + -1.1 566,794 + -1.2 566,794 + -1.7 566,794 + -1.6 566,794 + -1.1 566,794 + -0.7 566,794 + -0.5 566,795 - -0.8 566,795 - -0.7 566,795 - +0.2 566,795 - -1.2 566,795 - -0.4 566,795 - -1.6 566,795 - +0.5 566,795 - -0.3 566,807 + -0.3 566,807 + -1.1 566,807 + -2.1 566,808 - -2.1 566,895 + -0.5 566,896 - -1.7 566,896 - +0.1 566,933 - -1.3 567,164 - -0.2 567,164 - +0.4 567,164 - -0.1 567,164 - -0.1 567,247 + MPMX19_05836 0.13 +0.5 567,247 + MPMX19_05836 0.13 -0.9 567,247 + MPMX19_05836 0.13 -0.1 567,247 + MPMX19_05836 0.13 +0.5 567,247 + MPMX19_05836 0.13 +0.5 567,247 + MPMX19_05836 0.13 -0.3 567,247 + MPMX19_05836 0.13 -1.4 567,247 + MPMX19_05836 0.13 -0.3 567,248 - MPMX19_05836 0.13 +1.2 567,248 - MPMX19_05836 0.13 -1.3 567,248 - MPMX19_05836 0.13 -0.7 567,248 - MPMX19_05836 0.13 +0.1 567,248 - MPMX19_05836 0.13 +0.5 567,248 - MPMX19_05836 0.13 -0.5 567,248 - MPMX19_05836 0.13 +0.2 567,248 - MPMX19_05836 0.13 -1.4 567,248 - MPMX19_05836 0.13 -0.2 567,577 + MPMX19_05836 0.31 -1.2 567,577 + MPMX19_05836 0.31 -1.5 567,578 - MPMX19_05836 0.31 +0.8 567,578 - MPMX19_05836 0.31 -0.9 567,578 - MPMX19_05836 0.31 -1.3 567,578 - MPMX19_05836 0.31 -0.3
Or see this region's nucleotide sequence