Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05334 and MPMX19_05335 overlap by 4 nucleotides MPMX19_05335 and MPMX19_05336 overlap by 4 nucleotides
MPMX19_05334: MPMX19_05334 - hypothetical protein, at 2,837 to 4,468
_05334
MPMX19_05335: MPMX19_05335 - hypothetical protein, at 4,465 to 5,736
_05335
MPMX19_05336: MPMX19_05336 - Ribosome-associated ATPase, at 5,733 to 8,570
_05336
Position (kb) 4
5
6 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 3.512 kb on + strand, within MPMX19_05334 at 3.512 kb on + strand, within MPMX19_05334 at 3.512 kb on + strand, within MPMX19_05334 at 3.512 kb on + strand, within MPMX19_05334 at 3.512 kb on + strand, within MPMX19_05334 at 3.512 kb on + strand, within MPMX19_05334 at 3.512 kb on + strand, within MPMX19_05334 at 3.512 kb on + strand, within MPMX19_05334 at 3.513 kb on - strand, within MPMX19_05334 at 3.513 kb on - strand, within MPMX19_05334 at 3.513 kb on - strand, within MPMX19_05334 at 3.513 kb on - strand, within MPMX19_05334 at 3.513 kb on - strand, within MPMX19_05334 at 3.513 kb on - strand, within MPMX19_05334 at 3.513 kb on - strand, within MPMX19_05334 at 3.513 kb on - strand, within MPMX19_05334 at 3.650 kb on + strand, within MPMX19_05334 at 3.650 kb on + strand, within MPMX19_05334 at 3.650 kb on + strand, within MPMX19_05334 at 3.650 kb on + strand, within MPMX19_05334 at 3.650 kb on + strand, within MPMX19_05334 at 3.650 kb on + strand, within MPMX19_05334 at 3.650 kb on + strand, within MPMX19_05334 at 3.651 kb on - strand, within MPMX19_05334 at 3.651 kb on - strand, within MPMX19_05334 at 3.651 kb on - strand, within MPMX19_05334 at 3.651 kb on - strand, within MPMX19_05334 at 3.956 kb on + strand, within MPMX19_05334 at 4.064 kb on + strand, within MPMX19_05334 at 4.064 kb on + strand, within MPMX19_05334 at 4.064 kb on + strand, within MPMX19_05334 at 4.064 kb on + strand, within MPMX19_05334 at 4.064 kb on + strand, within MPMX19_05334 at 4.065 kb on - strand, within MPMX19_05334 at 4.065 kb on - strand, within MPMX19_05334 at 4.334 kb on + strand at 4.334 kb on + strand at 4.334 kb on + strand at 4.334 kb on + strand at 4.335 kb on - strand at 4.335 kb on - strand at 4.531 kb on + strand at 4.531 kb on + strand at 4.532 kb on - strand at 4.532 kb on - strand at 4.532 kb on - strand at 4.627 kb on + strand, within MPMX19_05335 at 4.627 kb on + strand, within MPMX19_05335 at 4.627 kb on + strand, within MPMX19_05335 at 4.627 kb on + strand, within MPMX19_05335 at 4.627 kb on + strand, within MPMX19_05335 at 4.628 kb on - strand, within MPMX19_05335 at 4.628 kb on - strand, within MPMX19_05335 at 4.628 kb on - strand, within MPMX19_05335 at 4.628 kb on - strand, within MPMX19_05335 at 4.628 kb on - strand, within MPMX19_05335 at 4.628 kb on - strand, within MPMX19_05335 at 4.628 kb on - strand, within MPMX19_05335 at 4.628 kb on - strand, within MPMX19_05335 at 5.054 kb on - strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.128 kb on + strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.129 kb on - strand, within MPMX19_05335 at 5.350 kb on + strand, within MPMX19_05335 at 5.350 kb on + strand, within MPMX19_05335 at 5.350 kb on + strand, within MPMX19_05335 at 5.351 kb on - strand, within MPMX19_05335 at 5.351 kb on - strand, within MPMX19_05335 at 5.351 kb on - strand, within MPMX19_05335 at 5.351 kb on - strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.389 kb on + strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.390 kb on - strand, within MPMX19_05335 at 5.473 kb on - strand, within MPMX19_05335 at 5.473 kb on - strand, within MPMX19_05335 at 5.473 kb on - strand, within MPMX19_05335 at 5.473 kb on - strand, within MPMX19_05335 at 5.573 kb on + strand, within MPMX19_05335 at 5.573 kb on + strand, within MPMX19_05335 at 5.573 kb on + strand, within MPMX19_05335 at 5.573 kb on + strand, within MPMX19_05335 at 5.778 kb on + strand at 5.985 kb on + strand at 5.985 kb on + strand at 5.985 kb on + strand at 5.985 kb on + strand at 5.985 kb on + strand at 5.985 kb on + strand at 5.985 kb on + strand at 5.985 kb on + strand at 5.986 kb on - strand at 5.986 kb on - strand at 5.986 kb on - strand at 5.986 kb on - strand at 5.986 kb on - strand at 5.986 kb on - strand at 5.986 kb on - strand at 5.986 kb on - strand at 5.986 kb on - strand at 5.986 kb on - strand at 6.015 kb on + strand at 6.015 kb on + strand at 6.015 kb on + strand at 6.015 kb on + strand at 6.016 kb on - strand at 6.016 kb on - strand at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.336 kb on + strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336 at 6.337 kb on - strand, within MPMX19_05336
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 3,512 + MPMX19_05334 0.41 +1.3 3,512 + MPMX19_05334 0.41 +0.2 3,512 + MPMX19_05334 0.41 -0.1 3,512 + MPMX19_05334 0.41 -0.1 3,512 + MPMX19_05334 0.41 -0.8 3,512 + MPMX19_05334 0.41 +0.5 3,512 + MPMX19_05334 0.41 -2.0 3,512 + MPMX19_05334 0.41 -0.5 3,513 - MPMX19_05334 0.41 -1.2 3,513 - MPMX19_05334 0.41 -1.6 3,513 - MPMX19_05334 0.41 -1.4 3,513 - MPMX19_05334 0.41 -0.5 3,513 - MPMX19_05334 0.41 -1.0 3,513 - MPMX19_05334 0.41 +1.5 3,513 - MPMX19_05334 0.41 -1.3 3,513 - MPMX19_05334 0.41 -0.3 3,650 + MPMX19_05334 0.50 -0.6 3,650 + MPMX19_05334 0.50 +1.2 3,650 + MPMX19_05334 0.50 -1.4 3,650 + MPMX19_05334 0.50 -1.6 3,650 + MPMX19_05334 0.50 -0.4 3,650 + MPMX19_05334 0.50 -1.7 3,650 + MPMX19_05334 0.50 -1.4 3,651 - MPMX19_05334 0.50 +1.2 3,651 - MPMX19_05334 0.50 -0.3 3,651 - MPMX19_05334 0.50 -0.2 3,651 - MPMX19_05334 0.50 -1.6 3,956 + MPMX19_05334 0.69 -0.8 4,064 + MPMX19_05334 0.75 -1.4 4,064 + MPMX19_05334 0.75 -0.7 4,064 + MPMX19_05334 0.75 -0.8 4,064 + MPMX19_05334 0.75 -0.1 4,064 + MPMX19_05334 0.75 +1.5 4,065 - MPMX19_05334 0.75 +1.3 4,065 - MPMX19_05334 0.75 -1.3 4,334 + -2.2 4,334 + -0.4 4,334 + -1.1 4,334 + +0.3 4,335 - -1.3 4,335 - -0.8 4,531 + -1.3 4,531 + -1.7 4,532 - -0.5 4,532 - -1.3 4,532 - -0.8 4,627 + MPMX19_05335 0.13 -1.9 4,627 + MPMX19_05335 0.13 -2.3 4,627 + MPMX19_05335 0.13 -2.4 4,627 + MPMX19_05335 0.13 -0.2 4,627 + MPMX19_05335 0.13 -0.2 4,628 - MPMX19_05335 0.13 -0.5 4,628 - MPMX19_05335 0.13 -1.1 4,628 - MPMX19_05335 0.13 -3.5 4,628 - MPMX19_05335 0.13 -0.3 4,628 - MPMX19_05335 0.13 -0.5 4,628 - MPMX19_05335 0.13 -0.3 4,628 - MPMX19_05335 0.13 -1.0 4,628 - MPMX19_05335 0.13 +0.4 5,054 - MPMX19_05335 0.46 -0.1 5,128 + MPMX19_05335 0.52 -2.1 5,128 + MPMX19_05335 0.52 -1.1 5,128 + MPMX19_05335 0.52 +0.5 5,128 + MPMX19_05335 0.52 -0.3 5,128 + MPMX19_05335 0.52 +0.0 5,128 + MPMX19_05335 0.52 +0.4 5,128 + MPMX19_05335 0.52 +0.0 5,128 + MPMX19_05335 0.52 -0.5 5,128 + MPMX19_05335 0.52 -0.5 5,128 + MPMX19_05335 0.52 -1.3 5,128 + MPMX19_05335 0.52 -0.1 5,128 + MPMX19_05335 0.52 -1.7 5,128 + MPMX19_05335 0.52 -1.3 5,128 + MPMX19_05335 0.52 +0.3 5,128 + MPMX19_05335 0.52 -1.1 5,128 + MPMX19_05335 0.52 -2.0 5,128 + MPMX19_05335 0.52 +0.2 5,128 + MPMX19_05335 0.52 -0.8 5,128 + MPMX19_05335 0.52 -0.7 5,129 - MPMX19_05335 0.52 -0.4 5,129 - MPMX19_05335 0.52 -0.5 5,129 - MPMX19_05335 0.52 -1.5 5,129 - MPMX19_05335 0.52 -1.1 5,129 - MPMX19_05335 0.52 -1.9 5,129 - MPMX19_05335 0.52 -0.3 5,129 - MPMX19_05335 0.52 -2.5 5,129 - MPMX19_05335 0.52 -1.4 5,129 - MPMX19_05335 0.52 -0.4 5,129 - MPMX19_05335 0.52 -1.2 5,129 - MPMX19_05335 0.52 -1.0 5,129 - MPMX19_05335 0.52 +0.5 5,129 - MPMX19_05335 0.52 +1.8 5,129 - MPMX19_05335 0.52 +0.1 5,129 - MPMX19_05335 0.52 -2.1 5,129 - MPMX19_05335 0.52 -0.6 5,129 - MPMX19_05335 0.52 -0.7 5,350 + MPMX19_05335 0.70 -0.9 5,350 + MPMX19_05335 0.70 -0.7 5,350 + MPMX19_05335 0.70 -1.8 5,351 - MPMX19_05335 0.70 -0.8 5,351 - MPMX19_05335 0.70 -0.4 5,351 - MPMX19_05335 0.70 -2.3 5,351 - MPMX19_05335 0.70 -1.3 5,389 + MPMX19_05335 0.73 -1.7 5,389 + MPMX19_05335 0.73 -1.3 5,389 + MPMX19_05335 0.73 -0.9 5,389 + MPMX19_05335 0.73 -0.8 5,389 + MPMX19_05335 0.73 -0.7 5,389 + MPMX19_05335 0.73 -0.8 5,389 + MPMX19_05335 0.73 -0.3 5,389 + MPMX19_05335 0.73 -0.8 5,389 + MPMX19_05335 0.73 -0.3 5,389 + MPMX19_05335 0.73 -1.3 5,389 + MPMX19_05335 0.73 +0.4 5,389 + MPMX19_05335 0.73 +0.2 5,390 - MPMX19_05335 0.73 +0.7 5,390 - MPMX19_05335 0.73 -1.5 5,390 - MPMX19_05335 0.73 -1.9 5,390 - MPMX19_05335 0.73 -1.6 5,390 - MPMX19_05335 0.73 -0.2 5,390 - MPMX19_05335 0.73 -1.7 5,390 - MPMX19_05335 0.73 -0.3 5,390 - MPMX19_05335 0.73 +0.5 5,390 - MPMX19_05335 0.73 -0.5 5,390 - MPMX19_05335 0.73 +0.5 5,390 - MPMX19_05335 0.73 -1.6 5,390 - MPMX19_05335 0.73 +0.5 5,390 - MPMX19_05335 0.73 +0.3 5,390 - MPMX19_05335 0.73 -1.0 5,390 - MPMX19_05335 0.73 +0.8 5,390 - MPMX19_05335 0.73 -2.6 5,473 - MPMX19_05335 0.79 -0.0 5,473 - MPMX19_05335 0.79 -1.3 5,473 - MPMX19_05335 0.79 -1.2 5,473 - MPMX19_05335 0.79 -0.8 5,573 + MPMX19_05335 0.87 +0.5 5,573 + MPMX19_05335 0.87 -1.8 5,573 + MPMX19_05335 0.87 -0.9 5,573 + MPMX19_05335 0.87 +0.2 5,778 + +0.3 5,985 + -0.8 5,985 + -0.2 5,985 + +0.7 5,985 + -0.3 5,985 + -1.0 5,985 + +0.0 5,985 + -0.6 5,985 + -2.8 5,986 - -0.7 5,986 - +2.5 5,986 - -0.1 5,986 - -1.0 5,986 - +0.2 5,986 - +0.7 5,986 - -0.1 5,986 - -2.3 5,986 - -0.4 5,986 - -0.8 6,015 + -1.5 6,015 + -1.3 6,015 + +1.5 6,015 + +1.3 6,016 - -0.6 6,016 - -1.5 6,336 + MPMX19_05336 0.21 -1.7 6,336 + MPMX19_05336 0.21 +0.6 6,336 + MPMX19_05336 0.21 -1.8 6,336 + MPMX19_05336 0.21 -0.5 6,336 + MPMX19_05336 0.21 -0.4 6,336 + MPMX19_05336 0.21 +0.0 6,336 + MPMX19_05336 0.21 +0.0 6,336 + MPMX19_05336 0.21 -0.5 6,336 + MPMX19_05336 0.21 +0.3 6,336 + MPMX19_05336 0.21 -1.7 6,336 + MPMX19_05336 0.21 -1.6 6,336 + MPMX19_05336 0.21 -0.3 6,336 + MPMX19_05336 0.21 -0.4 6,336 + MPMX19_05336 0.21 -0.4 6,336 + MPMX19_05336 0.21 -0.7 6,337 - MPMX19_05336 0.21 -0.3 6,337 - MPMX19_05336 0.21 -1.0 6,337 - MPMX19_05336 0.21 +0.7 6,337 - MPMX19_05336 0.21 -0.6 6,337 - MPMX19_05336 0.21 -0.3 6,337 - MPMX19_05336 0.21 -1.6 6,337 - MPMX19_05336 0.21 +1.0 6,337 - MPMX19_05336 0.21 -0.3 6,337 - MPMX19_05336 0.21 -0.7 6,337 - MPMX19_05336 0.21 -1.5 6,337 - MPMX19_05336 0.21 -1.0 6,337 - MPMX19_05336 0.21 -0.8 6,337 - MPMX19_05336 0.21 +0.2 6,337 - MPMX19_05336 0.21 -0.8 6,337 - MPMX19_05336 0.21 -1.0 6,337 - MPMX19_05336 0.21 -0.6 6,337 - MPMX19_05336 0.21 -0.4 6,337 - MPMX19_05336 0.21 -1.6 6,337 - MPMX19_05336 0.21 -0.2 6,337 - MPMX19_05336 0.21 +0.2 6,337 - MPMX19_05336 0.21 -0.6 6,337 - MPMX19_05336 0.21 -0.8 6,337 - MPMX19_05336 0.21 +0.4 6,337 - MPMX19_05336 0.21 -1.2
Or see this region's nucleotide sequence