Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04990

Experiment: MGL

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX19_04989 and MPMX19_04990 are separated by 101 nucleotidesMPMX19_04990 and MPMX19_04991 are separated by 137 nucleotides MPMX19_04989: MPMX19_04989 - K(+)/H(+) antiporter NhaP2, at 465,872 to 468,451 _04989 MPMX19_04990: MPMX19_04990 - Hydrogen peroxide-inducible genes activator, at 468,553 to 469,467 _04990 MPMX19_04991: MPMX19_04991 - hypothetical protein, at 469,605 to 470,228 _04991 Position (kb) 468 469 470Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.631 kb on + strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.632 kb on - strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.649 kb on + strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.650 kb on - strand, within MPMX19_04989at 467.658 kb on + strand, within MPMX19_04989at 467.658 kb on + strand, within MPMX19_04989at 467.658 kb on + strand, within MPMX19_04989at 467.659 kb on - strand, within MPMX19_04989at 467.659 kb on - strand, within MPMX19_04989at 467.659 kb on - strand, within MPMX19_04989at 467.659 kb on - strand, within MPMX19_04989at 467.659 kb on - strand, within MPMX19_04989at 467.745 kb on + strand, within MPMX19_04989at 467.745 kb on + strand, within MPMX19_04989at 467.745 kb on + strand, within MPMX19_04989at 467.745 kb on + strand, within MPMX19_04989at 467.745 kb on + strand, within MPMX19_04989at 467.746 kb on - strand, within MPMX19_04989at 467.746 kb on - strand, within MPMX19_04989at 467.746 kb on - strand, within MPMX19_04989at 467.746 kb on - strand, within MPMX19_04989at 468.027 kb on + strand, within MPMX19_04989at 468.027 kb on + strand, within MPMX19_04989at 468.027 kb on + strand, within MPMX19_04989at 468.028 kb on - strand, within MPMX19_04989at 468.291 kb on + strandat 468.291 kb on + strandat 468.291 kb on + strandat 468.291 kb on + strandat 468.291 kb on + strandat 468.292 kb on - strandat 468.292 kb on - strandat 468.292 kb on - strandat 468.292 kb on - strandat 468.292 kb on - strandat 468.514 kb on - strandat 468.528 kb on + strandat 468.528 kb on + strandat 468.528 kb on + strandat 468.528 kb on + strandat 468.528 kb on + strandat 468.528 kb on + strandat 468.528 kb on + strandat 468.528 kb on + strandat 468.529 kb on - strandat 468.529 kb on - strandat 468.529 kb on - strandat 468.529 kb on - strandat 468.529 kb on - strandat 468.529 kb on - strandat 468.529 kb on - strandat 468.529 kb on - strandat 468.753 kb on + strand, within MPMX19_04990at 468.753 kb on + strand, within MPMX19_04990at 468.753 kb on + strand, within MPMX19_04990at 468.753 kb on + strand, within MPMX19_04990at 468.753 kb on + strand, within MPMX19_04990at 468.753 kb on + strand, within MPMX19_04990at 468.753 kb on + strand, within MPMX19_04990at 468.754 kb on - strand, within MPMX19_04990at 468.755 kb on + strand, within MPMX19_04990at 468.756 kb on - strand, within MPMX19_04990at 468.756 kb on - strand, within MPMX19_04990at 469.891 kb on + strand, within MPMX19_04991at 469.891 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.903 kb on + strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.904 kb on - strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.906 kb on + strand, within MPMX19_04991at 469.907 kb on - strand, within MPMX19_04991at 469.907 kb on - strand, within MPMX19_04991at 469.907 kb on - strand, within MPMX19_04991at 469.907 kb on - strand, within MPMX19_04991at 469.907 kb on - strand, within MPMX19_04991at 469.907 kb on - strand, within MPMX19_04991at 469.907 kb on - strand, within MPMX19_04991at 469.958 kb on - strand, within MPMX19_04991at 469.958 kb on - strand, within MPMX19_04991at 469.984 kb on + strand, within MPMX19_04991at 469.984 kb on + strand, within MPMX19_04991at 469.985 kb on - strand, within MPMX19_04991at 470.007 kb on + strand, within MPMX19_04991at 470.008 kb on - strand, within MPMX19_04991at 470.008 kb on - strand, within MPMX19_04991at 470.029 kb on + strand, within MPMX19_04991at 470.029 kb on + strand, within MPMX19_04991at 470.030 kb on - strand, within MPMX19_04991at 470.030 kb on - strand, within MPMX19_04991at 470.030 kb on - strand, within MPMX19_04991at 470.030 kb on - strand, within MPMX19_04991at 470.255 kb on + strandat 470.256 kb on - strandat 470.256 kb on - strandat 470.281 kb on + strandat 470.281 kb on + strandat 470.293 kb on + strandat 470.293 kb on + strandat 470.293 kb on + strandat 470.293 kb on + strandat 470.293 kb on + strandat 470.294 kb on - strandat 470.294 kb on - strandat 470.294 kb on - strandat 470.294 kb on - strandat 470.294 kb on - strandat 470.294 kb on - strandat 470.294 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction MGL
remove
467,631 + MPMX19_04989 0.68 -0.1
467,631 + MPMX19_04989 0.68 -1.6
467,631 + MPMX19_04989 0.68 -0.3
467,631 + MPMX19_04989 0.68 -0.7
467,631 + MPMX19_04989 0.68 +0.1
467,631 + MPMX19_04989 0.68 -0.1
467,631 + MPMX19_04989 0.68 +2.7
467,631 + MPMX19_04989 0.68 +1.5
467,631 + MPMX19_04989 0.68 +0.9
467,631 + MPMX19_04989 0.68 -1.6
467,631 + MPMX19_04989 0.68 -0.8
467,631 + MPMX19_04989 0.68 -0.4
467,631 + MPMX19_04989 0.68 -1.1
467,632 - MPMX19_04989 0.68 -1.4
467,632 - MPMX19_04989 0.68 -0.8
467,632 - MPMX19_04989 0.68 -0.4
467,632 - MPMX19_04989 0.68 -0.5
467,632 - MPMX19_04989 0.68 +1.1
467,632 - MPMX19_04989 0.68 -0.6
467,632 - MPMX19_04989 0.68 -1.6
467,632 - MPMX19_04989 0.68 -0.6
467,632 - MPMX19_04989 0.68 -1.9
467,632 - MPMX19_04989 0.68 -3.4
467,632 - MPMX19_04989 0.68 +0.9
467,649 + MPMX19_04989 0.69 -0.3
467,649 + MPMX19_04989 0.69 -1.2
467,649 + MPMX19_04989 0.69 +0.1
467,649 + MPMX19_04989 0.69 -1.4
467,649 + MPMX19_04989 0.69 -0.6
467,649 + MPMX19_04989 0.69 -0.3
467,649 + MPMX19_04989 0.69 +0.6
467,649 + MPMX19_04989 0.69 -1.0
467,649 + MPMX19_04989 0.69 +0.7
467,649 + MPMX19_04989 0.69 +1.5
467,649 + MPMX19_04989 0.69 +0.7
467,649 + MPMX19_04989 0.69 +0.0
467,649 + MPMX19_04989 0.69 +1.2
467,649 + MPMX19_04989 0.69 +0.6
467,649 + MPMX19_04989 0.69 +0.4
467,649 + MPMX19_04989 0.69 -0.3
467,650 - MPMX19_04989 0.69 -0.2
467,650 - MPMX19_04989 0.69 -1.4
467,650 - MPMX19_04989 0.69 -0.6
467,650 - MPMX19_04989 0.69 -1.1
467,650 - MPMX19_04989 0.69 -1.3
467,650 - MPMX19_04989 0.69 -0.3
467,650 - MPMX19_04989 0.69 -0.1
467,650 - MPMX19_04989 0.69 +0.3
467,650 - MPMX19_04989 0.69 -0.9
467,650 - MPMX19_04989 0.69 -1.5
467,650 - MPMX19_04989 0.69 -0.3
467,650 - MPMX19_04989 0.69 -0.5
467,650 - MPMX19_04989 0.69 -0.0
467,650 - MPMX19_04989 0.69 -1.1
467,650 - MPMX19_04989 0.69 -0.6
467,650 - MPMX19_04989 0.69 -0.8
467,650 - MPMX19_04989 0.69 -1.1
467,650 - MPMX19_04989 0.69 -0.3
467,650 - MPMX19_04989 0.69 -1.5
467,650 - MPMX19_04989 0.69 -0.6
467,650 - MPMX19_04989 0.69 +2.1
467,650 - MPMX19_04989 0.69 +0.5
467,650 - MPMX19_04989 0.69 -0.1
467,650 - MPMX19_04989 0.69 -0.3
467,650 - MPMX19_04989 0.69 -2.0
467,650 - MPMX19_04989 0.69 +0.9
467,650 - MPMX19_04989 0.69 -2.1
467,650 - MPMX19_04989 0.69 -0.7
467,658 + MPMX19_04989 0.69 -0.1
467,658 + MPMX19_04989 0.69 +0.7
467,658 + MPMX19_04989 0.69 -0.5
467,659 - MPMX19_04989 0.69 -1.6
467,659 - MPMX19_04989 0.69 -0.2
467,659 - MPMX19_04989 0.69 +0.4
467,659 - MPMX19_04989 0.69 +0.1
467,659 - MPMX19_04989 0.69 +1.2
467,745 + MPMX19_04989 0.73 +0.6
467,745 + MPMX19_04989 0.73 +1.5
467,745 + MPMX19_04989 0.73 -1.2
467,745 + MPMX19_04989 0.73 +0.7
467,745 + MPMX19_04989 0.73 +0.7
467,746 - MPMX19_04989 0.73 -0.8
467,746 - MPMX19_04989 0.73 -0.5
467,746 - MPMX19_04989 0.73 -1.8
467,746 - MPMX19_04989 0.73 +0.7
468,027 + MPMX19_04989 0.84 -2.1
468,027 + MPMX19_04989 0.84 +0.2
468,027 + MPMX19_04989 0.84 +1.1
468,028 - MPMX19_04989 0.84 -1.4
468,291 + -0.6
468,291 + +0.7
468,291 + -0.3
468,291 + +0.2
468,291 + +0.1
468,292 - -0.6
468,292 - +0.7
468,292 - +1.4
468,292 - -1.2
468,292 - -2.0
468,514 - -0.5
468,528 + -0.9
468,528 + -2.5
468,528 + -2.6
468,528 + +0.4
468,528 + -0.3
468,528 + -1.5
468,528 + -1.0
468,528 + -0.6
468,529 - -0.1
468,529 - +0.2
468,529 - +0.9
468,529 - -0.1
468,529 - -0.1
468,529 - +0.4
468,529 - -0.3
468,529 - -0.5
468,753 + MPMX19_04990 0.22 -0.1
468,753 + MPMX19_04990 0.22 +0.2
468,753 + MPMX19_04990 0.22 -1.5
468,753 + MPMX19_04990 0.22 -1.6
468,753 + MPMX19_04990 0.22 +1.1
468,753 + MPMX19_04990 0.22 -1.7
468,753 + MPMX19_04990 0.22 -1.1
468,754 - MPMX19_04990 0.22 -0.6
468,755 + MPMX19_04990 0.22 -0.5
468,756 - MPMX19_04990 0.22 -0.9
468,756 - MPMX19_04990 0.22 -1.1
469,891 + MPMX19_04991 0.46 -0.5
469,891 + MPMX19_04991 0.46 -0.2
469,903 + MPMX19_04991 0.48 -0.9
469,903 + MPMX19_04991 0.48 -0.1
469,903 + MPMX19_04991 0.48 +0.9
469,903 + MPMX19_04991 0.48 -0.5
469,903 + MPMX19_04991 0.48 -0.1
469,903 + MPMX19_04991 0.48 +1.7
469,903 + MPMX19_04991 0.48 -0.2
469,903 + MPMX19_04991 0.48 +0.1
469,903 + MPMX19_04991 0.48 +0.4
469,903 + MPMX19_04991 0.48 +0.3
469,903 + MPMX19_04991 0.48 -0.3
469,903 + MPMX19_04991 0.48 -0.6
469,903 + MPMX19_04991 0.48 -1.1
469,903 + MPMX19_04991 0.48 -1.7
469,903 + MPMX19_04991 0.48 -0.5
469,903 + MPMX19_04991 0.48 +0.1
469,903 + MPMX19_04991 0.48 +1.1
469,904 - MPMX19_04991 0.48 -0.1
469,904 - MPMX19_04991 0.48 +0.1
469,904 - MPMX19_04991 0.48 +0.1
469,904 - MPMX19_04991 0.48 -0.5
469,904 - MPMX19_04991 0.48 +0.6
469,904 - MPMX19_04991 0.48 -0.1
469,904 - MPMX19_04991 0.48 +0.2
469,904 - MPMX19_04991 0.48 -1.1
469,904 - MPMX19_04991 0.48 -2.0
469,904 - MPMX19_04991 0.48 +0.1
469,904 - MPMX19_04991 0.48 -0.4
469,904 - MPMX19_04991 0.48 -0.2
469,904 - MPMX19_04991 0.48 -0.8
469,904 - MPMX19_04991 0.48 -0.2
469,904 - MPMX19_04991 0.48 +0.4
469,904 - MPMX19_04991 0.48 -1.1
469,904 - MPMX19_04991 0.48 -1.6
469,904 - MPMX19_04991 0.48 -0.6
469,904 - MPMX19_04991 0.48 -0.6
469,904 - MPMX19_04991 0.48 -0.1
469,904 - MPMX19_04991 0.48 +0.2
469,904 - MPMX19_04991 0.48 +1.1
469,904 - MPMX19_04991 0.48 -1.3
469,904 - MPMX19_04991 0.48 -1.1
469,904 - MPMX19_04991 0.48 -0.1
469,904 - MPMX19_04991 0.48 -0.3
469,904 - MPMX19_04991 0.48 -0.6
469,906 + MPMX19_04991 0.48 +0.6
469,906 + MPMX19_04991 0.48 -2.1
469,906 + MPMX19_04991 0.48 -0.0
469,906 + MPMX19_04991 0.48 -1.4
469,906 + MPMX19_04991 0.48 -0.3
469,906 + MPMX19_04991 0.48 +0.4
469,906 + MPMX19_04991 0.48 -0.6
469,906 + MPMX19_04991 0.48 -1.4
469,906 + MPMX19_04991 0.48 +0.7
469,906 + MPMX19_04991 0.48 -1.3
469,906 + MPMX19_04991 0.48 -0.0
469,906 + MPMX19_04991 0.48 -0.6
469,906 + MPMX19_04991 0.48 -0.7
469,906 + MPMX19_04991 0.48 -0.3
469,906 + MPMX19_04991 0.48 -0.2
469,906 + MPMX19_04991 0.48 -0.4
469,906 + MPMX19_04991 0.48 -0.9
469,907 - MPMX19_04991 0.48 -0.5
469,907 - MPMX19_04991 0.48 -1.3
469,907 - MPMX19_04991 0.48 -1.8
469,907 - MPMX19_04991 0.48 -3.1
469,907 - MPMX19_04991 0.48 -0.8
469,907 - MPMX19_04991 0.48 -1.2
469,907 - MPMX19_04991 0.48 +0.4
469,958 - MPMX19_04991 0.57 -0.8
469,958 - MPMX19_04991 0.57 -1.0
469,984 + MPMX19_04991 0.61 +0.1
469,984 + MPMX19_04991 0.61 -0.3
469,985 - MPMX19_04991 0.61 -0.9
470,007 + MPMX19_04991 0.64 +0.1
470,008 - MPMX19_04991 0.65 +0.0
470,008 - MPMX19_04991 0.65 -0.5
470,029 + MPMX19_04991 0.68 -1.2
470,029 + MPMX19_04991 0.68 -0.9
470,030 - MPMX19_04991 0.68 +0.9
470,030 - MPMX19_04991 0.68 -2.4
470,030 - MPMX19_04991 0.68 +0.1
470,030 - MPMX19_04991 0.68 -1.2
470,255 + -2.5
470,256 - +0.2
470,256 - +0.1
470,281 + -0.5
470,281 + -0.5
470,293 + -0.9
470,293 + -0.8
470,293 + +2.7
470,293 + -0.9
470,293 + -1.0
470,294 - +0.0
470,294 - -0.3
470,294 - -0.3
470,294 - -0.6
470,294 - -1.0
470,294 - -0.0
470,294 - +0.9

Or see this region's nucleotide sequence