Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04328

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04327 and MPMX19_04328 overlap by 4 nucleotidesMPMX19_04328 and MPMX19_04329 are separated by 58 nucleotides MPMX19_04327: MPMX19_04327 - hypothetical protein, at 690,853 to 691,923 _04327 MPMX19_04328: MPMX19_04328 - Arginine--tRNA ligase, at 691,920 to 693,680 _04328 MPMX19_04329: MPMX19_04329 - Deoxyguanosinetriphosphate triphosphohydrolase-like protein, at 693,739 to 694,938 _04329 Position (kb) 691 692 693 694Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 693.813 kb on - strandat 693.813 kb on - strandat 693.813 kb on - strandat 693.813 kb on - strandat 693.813 kb on - strandat 693.871 kb on - strand, within MPMX19_04329at 693.975 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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693,813 - -0.4
693,813 - -0.9
693,813 - -0.9
693,813 - -1.2
693,813 - +0.2
693,871 - MPMX19_04329 0.11 -1.1
693,975 - MPMX19_04329 0.20 -0.7
693,984 - MPMX19_04329 0.20 -1.4
693,984 - MPMX19_04329 0.20 -1.1
693,984 - MPMX19_04329 0.20 -1.3
693,984 - MPMX19_04329 0.20 -0.4
693,984 - MPMX19_04329 0.20 +0.7
693,984 - MPMX19_04329 0.20 +1.6
693,984 - MPMX19_04329 0.20 +0.2
693,984 - MPMX19_04329 0.20 -1.5
693,984 - MPMX19_04329 0.20 -2.7
693,984 - MPMX19_04329 0.20 +0.1
694,311 - MPMX19_04329 0.48 -1.0
694,311 - MPMX19_04329 0.48 -1.6
694,311 - MPMX19_04329 0.48 -1.0
694,311 - MPMX19_04329 0.48 -2.8
694,311 - MPMX19_04329 0.48 +0.2
694,311 - MPMX19_04329 0.48 -1.0
694,311 - MPMX19_04329 0.48 +1.0
694,311 - MPMX19_04329 0.48 -0.4
694,311 - MPMX19_04329 0.48 -1.0
694,311 - MPMX19_04329 0.48 +0.1
694,311 - MPMX19_04329 0.48 -2.0
694,311 - MPMX19_04329 0.48 +2.0
694,509 - MPMX19_04329 0.64 -1.8
694,509 - MPMX19_04329 0.64 +0.4
694,509 - MPMX19_04329 0.64 +0.6
694,509 - MPMX19_04329 0.64 -0.4
694,509 - MPMX19_04329 0.64 -2.0
694,509 - MPMX19_04329 0.64 -0.9
694,509 - MPMX19_04329 0.64 -1.0
694,509 - MPMX19_04329 0.64 -0.8

Or see this region's nucleotide sequence