Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04195 and MPMX19_04196 are separated by 62 nucleotides MPMX19_04196 and MPMX19_04197 overlap by 4 nucleotides MPMX19_04197 and MPMX19_04198 are separated by 180 nucleotides
MPMX19_04195: MPMX19_04195 - Sensor histidine kinase RcsC, at 528,267 to 530,489
_04195
MPMX19_04196: MPMX19_04196 - hypothetical protein, at 530,552 to 531,847
_04196
MPMX19_04197: MPMX19_04197 - hypothetical protein, at 531,844 to 532,062
_04197
MPMX19_04198: MPMX19_04198 - hypothetical protein, at 532,243 to 533,844
_04198
Position (kb) 530
531
532 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.732 kb on + strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 529.733 kb on - strand, within MPMX19_04195 at 530.085 kb on + strand, within MPMX19_04195 at 530.085 kb on + strand, within MPMX19_04195 at 530.086 kb on - strand, within MPMX19_04195 at 530.242 kb on + strand, within MPMX19_04195 at 530.242 kb on + strand, within MPMX19_04195 at 530.242 kb on + strand, within MPMX19_04195 at 530.242 kb on + strand, within MPMX19_04195 at 530.242 kb on + strand, within MPMX19_04195 at 530.243 kb on - strand, within MPMX19_04195 at 530.243 kb on - strand, within MPMX19_04195 at 530.243 kb on - strand, within MPMX19_04195 at 530.243 kb on - strand, within MPMX19_04195 at 530.492 kb on + strand at 530.493 kb on - strand at 530.493 kb on - strand at 530.520 kb on + strand at 530.520 kb on + strand at 530.521 kb on - strand at 530.521 kb on - strand at 530.521 kb on - strand at 530.521 kb on - strand at 530.521 kb on - strand at 530.691 kb on + strand, within MPMX19_04196 at 531.046 kb on + strand, within MPMX19_04196 at 531.047 kb on - strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.316 kb on + strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.317 kb on - strand, within MPMX19_04196 at 531.484 kb on - strand, within MPMX19_04196 at 531.484 kb on - strand, within MPMX19_04196 at 531.656 kb on + strand, within MPMX19_04196 at 531.657 kb on - strand, within MPMX19_04196 at 531.657 kb on - strand, within MPMX19_04196 at 531.657 kb on - strand, within MPMX19_04196 at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.766 kb on + strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.767 kb on - strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.845 kb on + strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 531.846 kb on - strand at 532.164 kb on + strand at 532.164 kb on + strand at 532.164 kb on + strand at 532.164 kb on + strand at 532.165 kb on - strand at 532.165 kb on - strand at 532.165 kb on - strand at 532.165 kb on - strand at 532.165 kb on - strand at 532.165 kb on - strand at 532.203 kb on + strand at 532.204 kb on - strand at 532.204 kb on - strand at 532.483 kb on + strand, within MPMX19_04198 at 532.483 kb on + strand, within MPMX19_04198 at 532.483 kb on + strand, within MPMX19_04198 at 532.483 kb on + strand, within MPMX19_04198 at 532.483 kb on + strand, within MPMX19_04198 at 532.483 kb on + strand, within MPMX19_04198 at 532.483 kb on + strand, within MPMX19_04198 at 532.483 kb on + strand, within MPMX19_04198 at 532.484 kb on - strand, within MPMX19_04198 at 532.484 kb on - strand, within MPMX19_04198 at 532.484 kb on - strand, within MPMX19_04198 at 532.484 kb on - strand, within MPMX19_04198 at 532.484 kb on - strand, within MPMX19_04198 at 532.484 kb on - strand, within MPMX19_04198 at 532.507 kb on + strand, within MPMX19_04198 at 532.507 kb on + strand, within MPMX19_04198 at 532.507 kb on + strand, within MPMX19_04198 at 532.507 kb on + strand, within MPMX19_04198 at 532.507 kb on + strand, within MPMX19_04198 at 532.507 kb on + strand, within MPMX19_04198 at 532.507 kb on + strand, within MPMX19_04198 at 532.507 kb on + strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.508 kb on - strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.552 kb on + strand, within MPMX19_04198 at 532.553 kb on - strand, within MPMX19_04198 at 532.553 kb on - strand, within MPMX19_04198 at 532.553 kb on - strand, within MPMX19_04198 at 532.553 kb on - strand, within MPMX19_04198 at 532.553 kb on - strand, within MPMX19_04198 at 532.553 kb on - strand, within MPMX19_04198 at 532.553 kb on - strand, within MPMX19_04198 at 532.553 kb on - strand, within MPMX19_04198 at 532.642 kb on + strand, within MPMX19_04198 at 532.642 kb on + strand, within MPMX19_04198 at 532.642 kb on + strand, within MPMX19_04198 at 532.643 kb on - strand, within MPMX19_04198 at 532.645 kb on + strand, within MPMX19_04198 at 532.645 kb on + strand, within MPMX19_04198 at 532.645 kb on + strand, within MPMX19_04198 at 532.645 kb on + strand, within MPMX19_04198 at 532.646 kb on - strand, within MPMX19_04198 at 532.646 kb on - strand, within MPMX19_04198 at 532.646 kb on - strand, within MPMX19_04198
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 529,732 + MPMX19_04195 0.66 +1.2 529,732 + MPMX19_04195 0.66 -0.9 529,732 + MPMX19_04195 0.66 -0.8 529,732 + MPMX19_04195 0.66 -0.2 529,732 + MPMX19_04195 0.66 -0.6 529,732 + MPMX19_04195 0.66 +0.4 529,732 + MPMX19_04195 0.66 -0.3 529,732 + MPMX19_04195 0.66 -0.6 529,732 + MPMX19_04195 0.66 +1.1 529,732 + MPMX19_04195 0.66 +0.5 529,732 + MPMX19_04195 0.66 -0.5 529,733 - MPMX19_04195 0.66 -0.5 529,733 - MPMX19_04195 0.66 +0.9 529,733 - MPMX19_04195 0.66 -0.5 529,733 - MPMX19_04195 0.66 -0.8 529,733 - MPMX19_04195 0.66 +0.1 529,733 - MPMX19_04195 0.66 -0.5 529,733 - MPMX19_04195 0.66 -0.6 529,733 - MPMX19_04195 0.66 -0.6 529,733 - MPMX19_04195 0.66 -0.4 529,733 - MPMX19_04195 0.66 +0.2 529,733 - MPMX19_04195 0.66 -0.8 529,733 - MPMX19_04195 0.66 -2.2 529,733 - MPMX19_04195 0.66 -0.9 529,733 - MPMX19_04195 0.66 +1.5 529,733 - MPMX19_04195 0.66 -1.7 530,085 + MPMX19_04195 0.82 +0.2 530,085 + MPMX19_04195 0.82 -1.4 530,086 - MPMX19_04195 0.82 -0.6 530,242 + MPMX19_04195 0.89 -2.1 530,242 + MPMX19_04195 0.89 +1.2 530,242 + MPMX19_04195 0.89 +0.7 530,242 + MPMX19_04195 0.89 -1.3 530,242 + MPMX19_04195 0.89 -0.5 530,243 - MPMX19_04195 0.89 -1.6 530,243 - MPMX19_04195 0.89 +0.5 530,243 - MPMX19_04195 0.89 -0.1 530,243 - MPMX19_04195 0.89 +0.5 530,492 + +0.3 530,493 - +0.2 530,493 - +0.9 530,520 + -0.2 530,520 + -1.6 530,521 - +1.1 530,521 - +0.1 530,521 - -2.2 530,521 - -0.3 530,521 - +0.4 530,691 + MPMX19_04196 0.11 +1.5 531,046 + MPMX19_04196 0.38 -0.3 531,047 - MPMX19_04196 0.38 -1.4 531,316 + MPMX19_04196 0.59 -1.4 531,316 + MPMX19_04196 0.59 -1.5 531,316 + MPMX19_04196 0.59 +0.5 531,316 + MPMX19_04196 0.59 +0.9 531,316 + MPMX19_04196 0.59 -1.1 531,316 + MPMX19_04196 0.59 -1.9 531,316 + MPMX19_04196 0.59 -2.1 531,316 + MPMX19_04196 0.59 +0.2 531,316 + MPMX19_04196 0.59 -0.2 531,316 + MPMX19_04196 0.59 -2.2 531,316 + MPMX19_04196 0.59 -2.3 531,316 + MPMX19_04196 0.59 -1.1 531,316 + MPMX19_04196 0.59 +1.0 531,316 + MPMX19_04196 0.59 -0.3 531,316 + MPMX19_04196 0.59 -0.5 531,317 - MPMX19_04196 0.59 -0.9 531,317 - MPMX19_04196 0.59 -0.3 531,317 - MPMX19_04196 0.59 +0.5 531,317 - MPMX19_04196 0.59 -0.6 531,317 - MPMX19_04196 0.59 +0.9 531,317 - MPMX19_04196 0.59 +1.2 531,317 - MPMX19_04196 0.59 +0.2 531,317 - MPMX19_04196 0.59 +0.9 531,317 - MPMX19_04196 0.59 -1.8 531,317 - MPMX19_04196 0.59 -0.4 531,317 - MPMX19_04196 0.59 +1.8 531,317 - MPMX19_04196 0.59 -0.6 531,317 - MPMX19_04196 0.59 -1.1 531,317 - MPMX19_04196 0.59 -0.7 531,317 - MPMX19_04196 0.59 -0.4 531,317 - MPMX19_04196 0.59 -3.0 531,317 - MPMX19_04196 0.59 -0.5 531,484 - MPMX19_04196 0.72 -0.2 531,484 - MPMX19_04196 0.72 -1.6 531,656 + MPMX19_04196 0.85 -0.2 531,657 - MPMX19_04196 0.85 +0.7 531,657 - MPMX19_04196 0.85 +0.5 531,657 - MPMX19_04196 0.85 -0.3 531,766 + -0.3 531,766 + -0.6 531,766 + +0.3 531,766 + -1.7 531,766 + -0.4 531,766 + -1.5 531,766 + +0.1 531,766 + -0.7 531,766 + -1.6 531,766 + +0.5 531,766 + -1.8 531,766 + -0.9 531,766 + -0.8 531,766 + -0.2 531,766 + -1.6 531,766 + -0.9 531,766 + -2.5 531,766 + -0.5 531,766 + -0.2 531,766 + +0.1 531,766 + -0.2 531,766 + -2.5 531,766 + -0.8 531,766 + +0.7 531,767 - -1.1 531,767 - -1.5 531,767 - +0.2 531,767 - -1.2 531,767 - +1.5 531,767 - +1.5 531,767 - +0.5 531,767 - +0.9 531,767 - +0.2 531,767 - -0.1 531,767 - -0.4 531,767 - -0.8 531,767 - -1.3 531,845 + -0.8 531,845 + -1.5 531,845 + -0.7 531,845 + -0.4 531,845 + -0.6 531,845 + +0.3 531,845 + +0.9 531,845 + -0.6 531,845 + -0.5 531,845 + +0.5 531,845 + -1.6 531,845 + -0.5 531,845 + -1.5 531,845 + -0.6 531,845 + -0.5 531,845 + -0.9 531,845 + +0.0 531,845 + -0.1 531,845 + -0.6 531,846 - -1.3 531,846 - +0.1 531,846 - -1.2 531,846 - +0.2 531,846 - +0.3 531,846 - -0.9 531,846 - -1.6 531,846 - +0.2 531,846 - -2.2 531,846 - +0.5 531,846 - +0.2 531,846 - -0.1 531,846 - +0.9 531,846 - -1.4 531,846 - +0.1 531,846 - -1.3 531,846 - -1.2 531,846 - +0.2 532,164 + +0.7 532,164 + -0.8 532,164 + +0.5 532,164 + -0.3 532,165 - -0.4 532,165 - +0.9 532,165 - +0.4 532,165 - -0.9 532,165 - -0.3 532,165 - -0.5 532,203 + -1.3 532,204 - +0.2 532,204 - -0.9 532,483 + MPMX19_04198 0.15 +0.4 532,483 + MPMX19_04198 0.15 -1.2 532,483 + MPMX19_04198 0.15 -0.6 532,483 + MPMX19_04198 0.15 -1.8 532,483 + MPMX19_04198 0.15 -1.0 532,483 + MPMX19_04198 0.15 +1.5 532,483 + MPMX19_04198 0.15 -2.0 532,483 + MPMX19_04198 0.15 -0.8 532,484 - MPMX19_04198 0.15 -0.5 532,484 - MPMX19_04198 0.15 -0.5 532,484 - MPMX19_04198 0.15 -1.3 532,484 - MPMX19_04198 0.15 +1.2 532,484 - MPMX19_04198 0.15 +0.9 532,484 - MPMX19_04198 0.15 -0.6 532,507 + MPMX19_04198 0.16 -0.5 532,507 + MPMX19_04198 0.16 -1.3 532,507 + MPMX19_04198 0.16 -0.5 532,507 + MPMX19_04198 0.16 -0.9 532,507 + MPMX19_04198 0.16 -0.3 532,507 + MPMX19_04198 0.16 +1.5 532,507 + MPMX19_04198 0.16 +0.7 532,507 + MPMX19_04198 0.16 -0.9 532,508 - MPMX19_04198 0.17 +1.3 532,508 - MPMX19_04198 0.17 +0.8 532,508 - MPMX19_04198 0.17 -1.6 532,508 - MPMX19_04198 0.17 -0.5 532,508 - MPMX19_04198 0.17 -1.9 532,508 - MPMX19_04198 0.17 -0.8 532,508 - MPMX19_04198 0.17 -1.3 532,508 - MPMX19_04198 0.17 +0.5 532,508 - MPMX19_04198 0.17 +1.1 532,508 - MPMX19_04198 0.17 -0.9 532,552 + MPMX19_04198 0.19 -0.1 532,552 + MPMX19_04198 0.19 -1.3 532,552 + MPMX19_04198 0.19 -1.8 532,552 + MPMX19_04198 0.19 -0.8 532,552 + MPMX19_04198 0.19 +2.5 532,552 + MPMX19_04198 0.19 +0.5 532,552 + MPMX19_04198 0.19 +0.4 532,552 + MPMX19_04198 0.19 -1.1 532,552 + MPMX19_04198 0.19 +0.2 532,552 + MPMX19_04198 0.19 -1.2 532,552 + MPMX19_04198 0.19 -1.3 532,552 + MPMX19_04198 0.19 -1.1 532,553 - MPMX19_04198 0.19 -0.8 532,553 - MPMX19_04198 0.19 -0.6 532,553 - MPMX19_04198 0.19 -1.2 532,553 - MPMX19_04198 0.19 +1.1 532,553 - MPMX19_04198 0.19 +0.5 532,553 - MPMX19_04198 0.19 -0.8 532,553 - MPMX19_04198 0.19 -0.5 532,553 - MPMX19_04198 0.19 -0.6 532,642 + MPMX19_04198 0.25 +1.1 532,642 + MPMX19_04198 0.25 -0.4 532,642 + MPMX19_04198 0.25 +0.9 532,643 - MPMX19_04198 0.25 -1.1 532,645 + MPMX19_04198 0.25 +0.2 532,645 + MPMX19_04198 0.25 +0.3 532,645 + MPMX19_04198 0.25 -0.6 532,645 + MPMX19_04198 0.25 -0.3 532,646 - MPMX19_04198 0.25 -1.5 532,646 - MPMX19_04198 0.25 -1.3 532,646 - MPMX19_04198 0.25 -1.6
Or see this region's nucleotide sequence