Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04092 and MPMX19_04093 are separated by 34 nucleotides MPMX19_04093 and MPMX19_04094 are separated by 62 nucleotides MPMX19_04094 and MPMX19_04095 are separated by 651 nucleotides
MPMX19_04092: MPMX19_04092 - Flagellar motor switch protein FliN, at 397,316 to 397,633
_04092
MPMX19_04093: MPMX19_04093 - hypothetical protein, at 397,668 to 398,444
_04093
MPMX19_04094: MPMX19_04094 - Flagellar M-ring protein, at 398,507 to 400,168
_04094
MPMX19_04095: MPMX19_04095 - hypothetical protein, at 400,820 to 401,341
_04095
Position (kb) 398
399
400
401 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.539 kb on + strand, within MPMX19_04092 at 397.540 kb on - strand, within MPMX19_04092 at 397.540 kb on - strand, within MPMX19_04092 at 397.540 kb on - strand, within MPMX19_04092 at 397.540 kb on - strand, within MPMX19_04092 at 397.540 kb on - strand, within MPMX19_04092 at 397.540 kb on - strand, within MPMX19_04092 at 397.540 kb on - strand, within MPMX19_04092 at 397.540 kb on - strand, within MPMX19_04092 at 397.578 kb on + strand, within MPMX19_04092 at 397.578 kb on + strand, within MPMX19_04092 at 397.579 kb on - strand, within MPMX19_04092 at 397.579 kb on - strand, within MPMX19_04092 at 397.579 kb on - strand, within MPMX19_04092 at 397.669 kb on + strand at 397.669 kb on + strand at 397.670 kb on - strand at 397.670 kb on - strand at 398.155 kb on + strand, within MPMX19_04093 at 398.156 kb on - strand, within MPMX19_04093 at 398.156 kb on - strand, within MPMX19_04093 at 398.203 kb on + strand, within MPMX19_04093 at 398.204 kb on - strand, within MPMX19_04093 at 398.251 kb on + strand, within MPMX19_04093 at 398.251 kb on + strand, within MPMX19_04093 at 398.252 kb on - strand, within MPMX19_04093 at 398.252 kb on - strand, within MPMX19_04093 at 398.252 kb on - strand, within MPMX19_04093 at 398.252 kb on - strand, within MPMX19_04093 at 398.252 kb on - strand, within MPMX19_04093 at 398.520 kb on + strand at 398.520 kb on + strand at 398.520 kb on + strand at 398.520 kb on + strand at 398.520 kb on + strand at 398.520 kb on + strand at 398.520 kb on + strand at 398.520 kb on + strand at 398.520 kb on + strand at 398.520 kb on + strand at 398.521 kb on - strand at 398.521 kb on - strand at 398.521 kb on - strand at 398.521 kb on - strand at 398.521 kb on - strand at 398.521 kb on - strand at 398.521 kb on - strand at 398.521 kb on - strand at 398.521 kb on - strand at 399.045 kb on + strand, within MPMX19_04094 at 399.046 kb on - strand, within MPMX19_04094 at 399.046 kb on - strand, within MPMX19_04094 at 399.046 kb on - strand, within MPMX19_04094 at 399.046 kb on - strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.075 kb on + strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.076 kb on - strand, within MPMX19_04094 at 399.162 kb on + strand, within MPMX19_04094 at 399.162 kb on + strand, within MPMX19_04094 at 399.162 kb on + strand, within MPMX19_04094 at 399.162 kb on + strand, within MPMX19_04094 at 399.163 kb on - strand, within MPMX19_04094 at 399.163 kb on - strand, within MPMX19_04094 at 399.163 kb on - strand, within MPMX19_04094 at 399.163 kb on - strand, within MPMX19_04094 at 399.163 kb on - strand, within MPMX19_04094 at 399.163 kb on - strand, within MPMX19_04094 at 399.411 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.465 kb on + strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.466 kb on - strand, within MPMX19_04094 at 399.859 kb on - strand, within MPMX19_04094 at 399.859 kb on - strand, within MPMX19_04094 at 399.966 kb on + strand, within MPMX19_04094 at 399.966 kb on + strand, within MPMX19_04094 at 399.966 kb on + strand, within MPMX19_04094 at 399.966 kb on + strand, within MPMX19_04094 at 399.966 kb on + strand, within MPMX19_04094 at 399.966 kb on + strand, within MPMX19_04094 at 399.967 kb on - strand, within MPMX19_04094 at 399.967 kb on - strand, within MPMX19_04094 at 399.967 kb on - strand, within MPMX19_04094 at 399.967 kb on - strand, within MPMX19_04094 at 400.032 kb on + strand at 400.032 kb on + strand at 400.033 kb on - strand at 400.033 kb on - strand at 400.074 kb on + strand at 400.074 kb on + strand at 400.074 kb on + strand at 400.075 kb on - strand at 400.075 kb on - strand at 400.075 kb on - strand at 400.075 kb on - strand at 400.075 kb on - strand at 400.075 kb on - strand at 400.266 kb on + strand at 400.266 kb on + strand at 400.266 kb on + strand at 400.266 kb on + strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.267 kb on - strand at 400.307 kb on - strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.348 kb on + strand at 400.349 kb on - strand at 400.349 kb on - strand at 400.471 kb on + strand at 400.496 kb on + strand at 400.496 kb on + strand at 400.496 kb on + strand at 400.496 kb on + strand at 400.496 kb on + strand at 400.496 kb on + strand at 400.496 kb on + strand at 400.497 kb on - strand at 400.497 kb on - strand at 400.497 kb on - strand at 400.599 kb on + strand at 400.600 kb on - strand at 400.777 kb on + strand at 400.777 kb on + strand at 400.778 kb on - strand at 400.778 kb on - strand at 400.778 kb on - strand at 400.797 kb on + strand at 400.797 kb on + strand at 400.797 kb on + strand at 400.798 kb on - strand at 400.798 kb on - strand at 400.798 kb on - strand at 400.819 kb on + strand at 400.819 kb on + strand at 400.819 kb on + strand at 400.819 kb on + strand at 400.819 kb on + strand at 400.819 kb on + strand at 400.819 kb on + strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.820 kb on - strand at 400.970 kb on + strand, within MPMX19_04095 at 400.970 kb on + strand, within MPMX19_04095 at 400.970 kb on + strand, within MPMX19_04095 at 400.970 kb on + strand, within MPMX19_04095 at 400.970 kb on + strand, within MPMX19_04095 at 400.970 kb on + strand, within MPMX19_04095 at 400.971 kb on - strand, within MPMX19_04095 at 400.971 kb on - strand, within MPMX19_04095 at 400.971 kb on - strand, within MPMX19_04095 at 401.168 kb on + strand, within MPMX19_04095
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 397,539 + MPMX19_04092 0.70 -0.9 397,539 + MPMX19_04092 0.70 -1.5 397,539 + MPMX19_04092 0.70 -0.1 397,539 + MPMX19_04092 0.70 -1.2 397,539 + MPMX19_04092 0.70 -0.6 397,539 + MPMX19_04092 0.70 -2.0 397,539 + MPMX19_04092 0.70 +0.3 397,539 + MPMX19_04092 0.70 -1.1 397,539 + MPMX19_04092 0.70 -0.8 397,539 + MPMX19_04092 0.70 +0.5 397,539 + MPMX19_04092 0.70 -0.1 397,539 + MPMX19_04092 0.70 +1.5 397,539 + MPMX19_04092 0.70 -0.7 397,539 + MPMX19_04092 0.70 -1.2 397,539 + MPMX19_04092 0.70 -0.3 397,540 - MPMX19_04092 0.70 +0.7 397,540 - MPMX19_04092 0.70 -0.7 397,540 - MPMX19_04092 0.70 -1.0 397,540 - MPMX19_04092 0.70 -2.3 397,540 - MPMX19_04092 0.70 -0.8 397,540 - MPMX19_04092 0.70 -1.4 397,540 - MPMX19_04092 0.70 +0.9 397,540 - MPMX19_04092 0.70 -2.7 397,578 + MPMX19_04092 0.82 +0.9 397,578 + MPMX19_04092 0.82 -0.4 397,579 - MPMX19_04092 0.83 -1.7 397,579 - MPMX19_04092 0.83 -1.7 397,579 - MPMX19_04092 0.83 -1.9 397,669 + +0.2 397,669 + +0.5 397,670 - +0.9 397,670 - -1.2 398,155 + MPMX19_04093 0.63 -0.3 398,156 - MPMX19_04093 0.63 -0.7 398,156 - MPMX19_04093 0.63 -2.0 398,203 + MPMX19_04093 0.69 -1.1 398,204 - MPMX19_04093 0.69 -1.4 398,251 + MPMX19_04093 0.75 -0.5 398,251 + MPMX19_04093 0.75 +0.2 398,252 - MPMX19_04093 0.75 +0.7 398,252 - MPMX19_04093 0.75 -0.1 398,252 - MPMX19_04093 0.75 -1.2 398,252 - MPMX19_04093 0.75 +0.1 398,252 - MPMX19_04093 0.75 -2.0 398,520 + -0.3 398,520 + -2.0 398,520 + -0.8 398,520 + -1.5 398,520 + -1.7 398,520 + -0.7 398,520 + -1.4 398,520 + -2.2 398,520 + -0.9 398,520 + +2.5 398,521 - -3.3 398,521 - -1.7 398,521 - -2.1 398,521 - +0.5 398,521 - -0.8 398,521 - -0.4 398,521 - -0.9 398,521 - +2.5 398,521 - +0.7 399,045 + MPMX19_04094 0.32 -0.5 399,046 - MPMX19_04094 0.32 -1.9 399,046 - MPMX19_04094 0.32 -1.1 399,046 - MPMX19_04094 0.32 -1.4 399,046 - MPMX19_04094 0.32 -1.9 399,075 + MPMX19_04094 0.34 -1.2 399,075 + MPMX19_04094 0.34 -1.6 399,075 + MPMX19_04094 0.34 +1.4 399,075 + MPMX19_04094 0.34 -0.0 399,075 + MPMX19_04094 0.34 -2.1 399,075 + MPMX19_04094 0.34 -3.2 399,075 + MPMX19_04094 0.34 +0.5 399,075 + MPMX19_04094 0.34 -1.2 399,075 + MPMX19_04094 0.34 -0.8 399,075 + MPMX19_04094 0.34 -1.9 399,075 + MPMX19_04094 0.34 -0.5 399,075 + MPMX19_04094 0.34 -0.9 399,075 + MPMX19_04094 0.34 +0.3 399,075 + MPMX19_04094 0.34 +0.2 399,075 + MPMX19_04094 0.34 +0.5 399,075 + MPMX19_04094 0.34 -0.1 399,075 + MPMX19_04094 0.34 -0.5 399,075 + MPMX19_04094 0.34 -2.1 399,075 + MPMX19_04094 0.34 -0.1 399,076 - MPMX19_04094 0.34 -1.5 399,076 - MPMX19_04094 0.34 -1.4 399,076 - MPMX19_04094 0.34 -1.8 399,076 - MPMX19_04094 0.34 +0.3 399,076 - MPMX19_04094 0.34 -0.6 399,076 - MPMX19_04094 0.34 -1.1 399,076 - MPMX19_04094 0.34 -0.9 399,076 - MPMX19_04094 0.34 -1.2 399,076 - MPMX19_04094 0.34 -1.4 399,076 - MPMX19_04094 0.34 -0.3 399,076 - MPMX19_04094 0.34 +0.5 399,076 - MPMX19_04094 0.34 +0.2 399,076 - MPMX19_04094 0.34 +0.9 399,076 - MPMX19_04094 0.34 -1.2 399,076 - MPMX19_04094 0.34 -0.8 399,076 - MPMX19_04094 0.34 -0.1 399,076 - MPMX19_04094 0.34 -1.0 399,076 - MPMX19_04094 0.34 +0.2 399,076 - MPMX19_04094 0.34 -1.1 399,076 - MPMX19_04094 0.34 -0.1 399,076 - MPMX19_04094 0.34 -0.8 399,076 - MPMX19_04094 0.34 -0.9 399,076 - MPMX19_04094 0.34 -0.8 399,162 + MPMX19_04094 0.39 -0.9 399,162 + MPMX19_04094 0.39 -0.8 399,162 + MPMX19_04094 0.39 +0.3 399,162 + MPMX19_04094 0.39 +0.2 399,163 - MPMX19_04094 0.39 -2.2 399,163 - MPMX19_04094 0.39 -1.9 399,163 - MPMX19_04094 0.39 -1.5 399,163 - MPMX19_04094 0.39 -0.9 399,163 - MPMX19_04094 0.39 +0.1 399,163 - MPMX19_04094 0.39 +0.5 399,411 + MPMX19_04094 0.54 -0.3 399,465 + MPMX19_04094 0.58 -1.8 399,465 + MPMX19_04094 0.58 -1.3 399,465 + MPMX19_04094 0.58 -1.2 399,465 + MPMX19_04094 0.58 +0.7 399,465 + MPMX19_04094 0.58 -0.6 399,465 + MPMX19_04094 0.58 +0.1 399,465 + MPMX19_04094 0.58 +0.5 399,465 + MPMX19_04094 0.58 -1.9 399,465 + MPMX19_04094 0.58 +0.1 399,465 + MPMX19_04094 0.58 -1.3 399,465 + MPMX19_04094 0.58 -0.5 399,465 + MPMX19_04094 0.58 +0.5 399,465 + MPMX19_04094 0.58 -1.5 399,465 + MPMX19_04094 0.58 -2.3 399,465 + MPMX19_04094 0.58 -1.8 399,465 + MPMX19_04094 0.58 -2.5 399,465 + MPMX19_04094 0.58 -0.3 399,465 + MPMX19_04094 0.58 -0.1 399,465 + MPMX19_04094 0.58 -1.2 399,466 - MPMX19_04094 0.58 +0.2 399,466 - MPMX19_04094 0.58 -1.0 399,466 - MPMX19_04094 0.58 -1.6 399,466 - MPMX19_04094 0.58 -0.6 399,466 - MPMX19_04094 0.58 -2.5 399,466 - MPMX19_04094 0.58 -0.5 399,466 - MPMX19_04094 0.58 -2.3 399,466 - MPMX19_04094 0.58 -2.5 399,466 - MPMX19_04094 0.58 -1.6 399,466 - MPMX19_04094 0.58 -1.6 399,859 - MPMX19_04094 0.81 -1.4 399,859 - MPMX19_04094 0.81 -1.5 399,966 + MPMX19_04094 0.88 -0.9 399,966 + MPMX19_04094 0.88 +0.9 399,966 + MPMX19_04094 0.88 -0.7 399,966 + MPMX19_04094 0.88 -1.4 399,966 + MPMX19_04094 0.88 -0.1 399,966 + MPMX19_04094 0.88 -0.7 399,967 - MPMX19_04094 0.88 -1.6 399,967 - MPMX19_04094 0.88 -0.5 399,967 - MPMX19_04094 0.88 -0.8 399,967 - MPMX19_04094 0.88 -0.1 400,032 + -0.9 400,032 + -1.1 400,033 - -0.1 400,033 - -2.4 400,074 + -0.6 400,074 + -0.9 400,074 + -1.3 400,075 - -1.3 400,075 - +0.2 400,075 - +0.5 400,075 - -1.3 400,075 - -0.5 400,075 - -0.8 400,266 + -1.1 400,266 + -3.8 400,266 + -0.7 400,266 + -0.7 400,267 - -1.1 400,267 - -1.3 400,267 - -0.3 400,267 - -1.2 400,267 - -0.5 400,267 - +1.5 400,267 - -0.6 400,267 - +0.1 400,267 - -0.7 400,267 - -0.3 400,267 - -0.7 400,267 - -1.1 400,307 - -1.7 400,342 + -1.3 400,342 + -0.7 400,342 + -0.1 400,342 + -0.5 400,342 + -0.7 400,342 + -1.1 400,342 + +0.3 400,343 - +0.1 400,343 - -0.5 400,343 - -1.6 400,343 - -0.1 400,343 - -0.7 400,343 - -0.7 400,343 - -0.1 400,343 - -0.4 400,348 + +0.7 400,349 - -1.2 400,349 - -1.3 400,471 + -0.1 400,496 + -1.2 400,496 + -0.7 400,496 + -0.7 400,496 + -3.0 400,496 + -1.2 400,496 + -0.3 400,496 + +0.7 400,497 - -0.3 400,497 - -1.9 400,497 - -1.2 400,599 + -2.4 400,600 - -2.3 400,777 + -1.2 400,777 + -0.8 400,778 - -1.4 400,778 - -0.5 400,778 - +0.9 400,797 + -0.3 400,797 + -1.7 400,797 + -2.4 400,798 - -0.5 400,798 - -2.5 400,798 - -0.1 400,819 + -0.9 400,819 + -0.8 400,819 + -2.9 400,819 + -0.4 400,819 + -0.6 400,819 + -0.9 400,819 + -0.2 400,820 - +0.9 400,820 - +0.7 400,820 - +1.9 400,820 - +0.7 400,820 - -0.5 400,820 - -0.6 400,820 - -0.8 400,820 - -0.6 400,820 - -0.5 400,820 - +0.5 400,820 - +0.0 400,820 - +0.1 400,820 - +0.5 400,820 - -0.7 400,970 + MPMX19_04095 0.29 -0.2 400,970 + MPMX19_04095 0.29 -0.7 400,970 + MPMX19_04095 0.29 +0.7 400,970 + MPMX19_04095 0.29 +1.2 400,970 + MPMX19_04095 0.29 +0.5 400,970 + MPMX19_04095 0.29 +0.2 400,971 - MPMX19_04095 0.29 -0.2 400,971 - MPMX19_04095 0.29 -0.1 400,971 - MPMX19_04095 0.29 -0.9 401,168 + MPMX19_04095 0.67 -0.3
Or see this region's nucleotide sequence