Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03818 and MPMX19_03819 are separated by 224 nucleotides MPMX19_03819 and MPMX19_03820 overlap by 4 nucleotides MPMX19_03820 and MPMX19_03821 are separated by 24 nucleotides
MPMX19_03818: MPMX19_03818 - Hydrogen peroxide-inducible genes activator, at 54,805 to 55,755
_03818
MPMX19_03819: MPMX19_03819 - NADP-reducing hydrogenase subunit HndA, at 55,980 to 56,492
_03819
MPMX19_03820: MPMX19_03820 - hypothetical protein, at 56,489 to 58,069
_03820
MPMX19_03821: MPMX19_03821 - Putative formate dehydrogenase, at 58,094 to 60,949
_03821
Position (kb) 56
57
58
59 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 55.492 kb on + strand, within MPMX19_03818 at 55.492 kb on + strand, within MPMX19_03818 at 55.492 kb on + strand, within MPMX19_03818 at 55.492 kb on + strand, within MPMX19_03818 at 55.493 kb on - strand, within MPMX19_03818 at 55.493 kb on - strand, within MPMX19_03818 at 55.493 kb on - strand, within MPMX19_03818 at 55.493 kb on - strand, within MPMX19_03818 at 55.493 kb on - strand, within MPMX19_03818 at 55.624 kb on + strand, within MPMX19_03818 at 55.624 kb on + strand, within MPMX19_03818 at 55.624 kb on + strand, within MPMX19_03818 at 55.625 kb on - strand, within MPMX19_03818 at 55.625 kb on - strand, within MPMX19_03818 at 55.625 kb on - strand, within MPMX19_03818 at 55.625 kb on - strand, within MPMX19_03818 at 56.058 kb on + strand, within MPMX19_03819 at 56.139 kb on + strand, within MPMX19_03819 at 56.139 kb on + strand, within MPMX19_03819 at 56.139 kb on + strand, within MPMX19_03819 at 56.139 kb on + strand, within MPMX19_03819 at 56.139 kb on + strand, within MPMX19_03819 at 56.139 kb on + strand, within MPMX19_03819 at 56.139 kb on + strand, within MPMX19_03819 at 56.139 kb on + strand, within MPMX19_03819 at 56.139 kb on + strand, within MPMX19_03819 at 56.140 kb on - strand, within MPMX19_03819 at 56.140 kb on - strand, within MPMX19_03819 at 56.140 kb on - strand, within MPMX19_03819 at 56.140 kb on - strand, within MPMX19_03819 at 56.140 kb on - strand, within MPMX19_03819 at 56.639 kb on + strand at 56.639 kb on + strand at 56.639 kb on + strand at 56.639 kb on + strand at 56.639 kb on + strand at 56.639 kb on + strand at 56.639 kb on + strand at 56.639 kb on + strand at 56.639 kb on + strand at 56.640 kb on - strand at 56.640 kb on - strand at 56.640 kb on - strand at 56.640 kb on - strand at 56.640 kb on - strand at 56.640 kb on - strand at 56.687 kb on + strand, within MPMX19_03820 at 56.687 kb on + strand, within MPMX19_03820 at 56.789 kb on + strand, within MPMX19_03820 at 56.789 kb on + strand, within MPMX19_03820 at 56.790 kb on - strand, within MPMX19_03820 at 56.858 kb on + strand, within MPMX19_03820 at 56.858 kb on + strand, within MPMX19_03820 at 56.859 kb on - strand, within MPMX19_03820 at 57.112 kb on + strand, within MPMX19_03820 at 57.112 kb on + strand, within MPMX19_03820 at 57.112 kb on + strand, within MPMX19_03820 at 57.113 kb on - strand, within MPMX19_03820 at 57.113 kb on - strand, within MPMX19_03820 at 57.113 kb on - strand, within MPMX19_03820 at 57.113 kb on - strand, within MPMX19_03820 at 57.113 kb on - strand, within MPMX19_03820 at 57.113 kb on - strand, within MPMX19_03820 at 57.152 kb on + strand, within MPMX19_03820 at 57.153 kb on - strand, within MPMX19_03820 at 57.153 kb on - strand, within MPMX19_03820 at 57.158 kb on + strand, within MPMX19_03820 at 57.158 kb on + strand, within MPMX19_03820 at 57.158 kb on + strand, within MPMX19_03820 at 57.158 kb on + strand, within MPMX19_03820 at 57.158 kb on + strand, within MPMX19_03820 at 57.158 kb on + strand, within MPMX19_03820 at 57.158 kb on + strand, within MPMX19_03820 at 57.158 kb on + strand, within MPMX19_03820 at 57.158 kb on + strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.159 kb on - strand, within MPMX19_03820 at 57.173 kb on + strand, within MPMX19_03820 at 57.218 kb on + strand, within MPMX19_03820 at 57.218 kb on + strand, within MPMX19_03820 at 57.218 kb on + strand, within MPMX19_03820 at 57.219 kb on - strand, within MPMX19_03820 at 57.219 kb on - strand, within MPMX19_03820 at 57.219 kb on - strand, within MPMX19_03820 at 57.299 kb on + strand, within MPMX19_03820 at 57.299 kb on + strand, within MPMX19_03820 at 57.299 kb on + strand, within MPMX19_03820 at 57.299 kb on + strand, within MPMX19_03820 at 57.300 kb on - strand, within MPMX19_03820 at 57.300 kb on - strand, within MPMX19_03820 at 57.300 kb on - strand, within MPMX19_03820 at 57.300 kb on - strand, within MPMX19_03820 at 57.300 kb on - strand, within MPMX19_03820 at 57.300 kb on - strand, within MPMX19_03820 at 57.300 kb on - strand, within MPMX19_03820 at 57.470 kb on + strand, within MPMX19_03820 at 57.470 kb on + strand, within MPMX19_03820 at 57.470 kb on + strand, within MPMX19_03820 at 57.471 kb on - strand, within MPMX19_03820 at 57.471 kb on - strand, within MPMX19_03820 at 57.471 kb on - strand, within MPMX19_03820 at 57.473 kb on + strand, within MPMX19_03820 at 57.473 kb on + strand, within MPMX19_03820 at 57.474 kb on - strand, within MPMX19_03820 at 57.474 kb on - strand, within MPMX19_03820 at 57.590 kb on + strand, within MPMX19_03820 at 57.590 kb on + strand, within MPMX19_03820 at 57.590 kb on + strand, within MPMX19_03820 at 57.590 kb on + strand, within MPMX19_03820 at 57.590 kb on + strand, within MPMX19_03820 at 57.590 kb on + strand, within MPMX19_03820 at 57.596 kb on + strand, within MPMX19_03820 at 57.597 kb on - strand, within MPMX19_03820 at 57.597 kb on - strand, within MPMX19_03820 at 57.597 kb on - strand, within MPMX19_03820 at 57.597 kb on - strand, within MPMX19_03820 at 57.698 kb on + strand, within MPMX19_03820 at 57.698 kb on + strand, within MPMX19_03820 at 57.698 kb on + strand, within MPMX19_03820 at 57.698 kb on + strand, within MPMX19_03820 at 57.698 kb on + strand, within MPMX19_03820 at 57.698 kb on + strand, within MPMX19_03820 at 57.699 kb on - strand, within MPMX19_03820 at 57.699 kb on - strand, within MPMX19_03820 at 57.699 kb on - strand, within MPMX19_03820 at 57.699 kb on - strand, within MPMX19_03820 at 57.699 kb on - strand, within MPMX19_03820 at 57.980 kb on + strand at 58.118 kb on + strand at 58.118 kb on + strand at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.415 kb on + strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.416 kb on - strand, within MPMX19_03821 at 58.568 kb on + strand, within MPMX19_03821 at 58.568 kb on + strand, within MPMX19_03821 at 58.568 kb on + strand, within MPMX19_03821 at 58.568 kb on + strand, within MPMX19_03821 at 58.568 kb on + strand, within MPMX19_03821 at 58.569 kb on - strand, within MPMX19_03821 at 58.569 kb on - strand, within MPMX19_03821 at 58.569 kb on - strand, within MPMX19_03821 at 58.569 kb on - strand, within MPMX19_03821 at 58.569 kb on - strand, within MPMX19_03821 at 58.569 kb on - strand, within MPMX19_03821 at 58.569 kb on - strand, within MPMX19_03821 at 58.829 kb on + strand, within MPMX19_03821 at 58.829 kb on + strand, within MPMX19_03821 at 58.829 kb on + strand, within MPMX19_03821 at 58.829 kb on + strand, within MPMX19_03821 at 58.829 kb on + strand, within MPMX19_03821 at 58.829 kb on + strand, within MPMX19_03821 at 58.829 kb on + strand, within MPMX19_03821 at 58.829 kb on + strand, within MPMX19_03821 at 58.830 kb on - strand, within MPMX19_03821 at 58.955 kb on + strand, within MPMX19_03821 at 58.955 kb on + strand, within MPMX19_03821 at 58.955 kb on + strand, within MPMX19_03821 at 58.955 kb on + strand, within MPMX19_03821 at 58.955 kb on + strand, within MPMX19_03821 at 58.956 kb on - strand, within MPMX19_03821 at 58.956 kb on - strand, within MPMX19_03821 at 58.956 kb on - strand, within MPMX19_03821 at 58.956 kb on - strand, within MPMX19_03821 at 58.956 kb on - strand, within MPMX19_03821 at 58.956 kb on - strand, within MPMX19_03821 at 58.956 kb on - strand, within MPMX19_03821 at 59.048 kb on + strand, within MPMX19_03821
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 55,492 + MPMX19_03818 0.72 -1.3 55,492 + MPMX19_03818 0.72 -1.2 55,492 + MPMX19_03818 0.72 +0.2 55,492 + MPMX19_03818 0.72 +0.0 55,493 - MPMX19_03818 0.72 -2.0 55,493 - MPMX19_03818 0.72 -1.0 55,493 - MPMX19_03818 0.72 -0.4 55,493 - MPMX19_03818 0.72 +0.2 55,493 - MPMX19_03818 0.72 -0.5 55,624 + MPMX19_03818 0.86 +0.0 55,624 + MPMX19_03818 0.86 +0.4 55,624 + MPMX19_03818 0.86 +0.2 55,625 - MPMX19_03818 0.86 -1.1 55,625 - MPMX19_03818 0.86 +2.5 55,625 - MPMX19_03818 0.86 -1.3 55,625 - MPMX19_03818 0.86 -1.1 56,058 + MPMX19_03819 0.15 -0.1 56,139 + MPMX19_03819 0.31 +1.5 56,139 + MPMX19_03819 0.31 +0.4 56,139 + MPMX19_03819 0.31 -0.1 56,139 + MPMX19_03819 0.31 +0.5 56,139 + MPMX19_03819 0.31 +0.0 56,139 + MPMX19_03819 0.31 -1.8 56,139 + MPMX19_03819 0.31 -2.6 56,139 + MPMX19_03819 0.31 +0.5 56,139 + MPMX19_03819 0.31 -0.8 56,140 - MPMX19_03819 0.31 -0.1 56,140 - MPMX19_03819 0.31 +0.9 56,140 - MPMX19_03819 0.31 +0.3 56,140 - MPMX19_03819 0.31 -1.5 56,140 - MPMX19_03819 0.31 -0.5 56,639 + -1.4 56,639 + -0.5 56,639 + -0.7 56,639 + +1.7 56,639 + -0.1 56,639 + -0.8 56,639 + +0.4 56,639 + -1.7 56,639 + +0.2 56,640 - -0.8 56,640 - -2.0 56,640 - -1.2 56,640 - -0.1 56,640 - +0.1 56,640 - -1.1 56,687 + MPMX19_03820 0.13 -1.3 56,687 + MPMX19_03820 0.13 -0.2 56,789 + MPMX19_03820 0.19 +0.4 56,789 + MPMX19_03820 0.19 +0.2 56,790 - MPMX19_03820 0.19 +0.1 56,858 + MPMX19_03820 0.23 -0.3 56,858 + MPMX19_03820 0.23 -0.9 56,859 - MPMX19_03820 0.23 -1.0 57,112 + MPMX19_03820 0.39 -0.5 57,112 + MPMX19_03820 0.39 -0.1 57,112 + MPMX19_03820 0.39 +0.7 57,113 - MPMX19_03820 0.39 -0.7 57,113 - MPMX19_03820 0.39 -2.6 57,113 - MPMX19_03820 0.39 -0.4 57,113 - MPMX19_03820 0.39 -0.3 57,113 - MPMX19_03820 0.39 -0.3 57,113 - MPMX19_03820 0.39 -1.0 57,152 + MPMX19_03820 0.42 -1.4 57,153 - MPMX19_03820 0.42 -1.2 57,153 - MPMX19_03820 0.42 -2.1 57,158 + MPMX19_03820 0.42 +0.7 57,158 + MPMX19_03820 0.42 -1.4 57,158 + MPMX19_03820 0.42 +0.9 57,158 + MPMX19_03820 0.42 -0.3 57,158 + MPMX19_03820 0.42 -1.5 57,158 + MPMX19_03820 0.42 -0.8 57,158 + MPMX19_03820 0.42 +0.5 57,158 + MPMX19_03820 0.42 +0.2 57,158 + MPMX19_03820 0.42 -0.1 57,159 - MPMX19_03820 0.42 +0.2 57,159 - MPMX19_03820 0.42 -0.3 57,159 - MPMX19_03820 0.42 -1.7 57,159 - MPMX19_03820 0.42 -1.4 57,159 - MPMX19_03820 0.42 -0.2 57,159 - MPMX19_03820 0.42 -0.8 57,159 - MPMX19_03820 0.42 -1.2 57,159 - MPMX19_03820 0.42 +1.1 57,159 - MPMX19_03820 0.42 -0.3 57,159 - MPMX19_03820 0.42 -2.7 57,159 - MPMX19_03820 0.42 -0.7 57,159 - MPMX19_03820 0.42 +0.4 57,159 - MPMX19_03820 0.42 -0.1 57,159 - MPMX19_03820 0.42 -0.7 57,159 - MPMX19_03820 0.42 -0.3 57,159 - MPMX19_03820 0.42 -1.3 57,159 - MPMX19_03820 0.42 +0.2 57,159 - MPMX19_03820 0.42 +0.3 57,173 + MPMX19_03820 0.43 -2.0 57,218 + MPMX19_03820 0.46 -1.6 57,218 + MPMX19_03820 0.46 +0.5 57,218 + MPMX19_03820 0.46 -0.5 57,219 - MPMX19_03820 0.46 -0.9 57,219 - MPMX19_03820 0.46 -1.0 57,219 - MPMX19_03820 0.46 -1.9 57,299 + MPMX19_03820 0.51 -1.2 57,299 + MPMX19_03820 0.51 -0.5 57,299 + MPMX19_03820 0.51 -2.9 57,299 + MPMX19_03820 0.51 -1.0 57,300 - MPMX19_03820 0.51 -0.8 57,300 - MPMX19_03820 0.51 +0.2 57,300 - MPMX19_03820 0.51 -1.0 57,300 - MPMX19_03820 0.51 -0.3 57,300 - MPMX19_03820 0.51 +0.2 57,300 - MPMX19_03820 0.51 -1.1 57,300 - MPMX19_03820 0.51 -0.8 57,470 + MPMX19_03820 0.62 -1.5 57,470 + MPMX19_03820 0.62 -0.4 57,470 + MPMX19_03820 0.62 -2.7 57,471 - MPMX19_03820 0.62 -0.7 57,471 - MPMX19_03820 0.62 -0.8 57,471 - MPMX19_03820 0.62 -0.2 57,473 + MPMX19_03820 0.62 +0.9 57,473 + MPMX19_03820 0.62 +0.5 57,474 - MPMX19_03820 0.62 -1.7 57,474 - MPMX19_03820 0.62 -1.5 57,590 + MPMX19_03820 0.70 -0.8 57,590 + MPMX19_03820 0.70 -0.9 57,590 + MPMX19_03820 0.70 -0.8 57,590 + MPMX19_03820 0.70 -1.1 57,590 + MPMX19_03820 0.70 -1.0 57,590 + MPMX19_03820 0.70 -0.3 57,596 + MPMX19_03820 0.70 -0.3 57,597 - MPMX19_03820 0.70 +0.7 57,597 - MPMX19_03820 0.70 -1.1 57,597 - MPMX19_03820 0.70 -0.3 57,597 - MPMX19_03820 0.70 +1.9 57,698 + MPMX19_03820 0.76 +0.2 57,698 + MPMX19_03820 0.76 -0.1 57,698 + MPMX19_03820 0.76 -1.6 57,698 + MPMX19_03820 0.76 +0.2 57,698 + MPMX19_03820 0.76 +0.7 57,698 + MPMX19_03820 0.76 -0.5 57,699 - MPMX19_03820 0.77 +0.5 57,699 - MPMX19_03820 0.77 -0.5 57,699 - MPMX19_03820 0.77 -0.9 57,699 - MPMX19_03820 0.77 -0.3 57,699 - MPMX19_03820 0.77 -1.5 57,980 + -1.3 58,118 + -2.2 58,118 + +0.0 58,415 + MPMX19_03821 0.11 -1.0 58,415 + MPMX19_03821 0.11 -0.8 58,415 + MPMX19_03821 0.11 -0.7 58,415 + MPMX19_03821 0.11 -0.3 58,415 + MPMX19_03821 0.11 -1.1 58,415 + MPMX19_03821 0.11 -0.1 58,415 + MPMX19_03821 0.11 -0.3 58,415 + MPMX19_03821 0.11 -1.6 58,415 + MPMX19_03821 0.11 +0.7 58,415 + MPMX19_03821 0.11 -0.3 58,415 + MPMX19_03821 0.11 +0.7 58,415 + MPMX19_03821 0.11 -1.9 58,415 + MPMX19_03821 0.11 +0.5 58,415 + MPMX19_03821 0.11 -0.6 58,415 + MPMX19_03821 0.11 -0.5 58,415 + MPMX19_03821 0.11 -0.5 58,415 + MPMX19_03821 0.11 -0.7 58,415 + MPMX19_03821 0.11 -1.3 58,415 + MPMX19_03821 0.11 -0.3 58,416 - MPMX19_03821 0.11 -0.7 58,416 - MPMX19_03821 0.11 -1.4 58,416 - MPMX19_03821 0.11 -0.8 58,416 - MPMX19_03821 0.11 -1.5 58,416 - MPMX19_03821 0.11 +1.9 58,416 - MPMX19_03821 0.11 +0.9 58,416 - MPMX19_03821 0.11 -1.8 58,416 - MPMX19_03821 0.11 -0.3 58,416 - MPMX19_03821 0.11 -1.0 58,416 - MPMX19_03821 0.11 -0.5 58,416 - MPMX19_03821 0.11 +1.7 58,416 - MPMX19_03821 0.11 -2.2 58,568 + MPMX19_03821 0.17 +0.5 58,568 + MPMX19_03821 0.17 +0.8 58,568 + MPMX19_03821 0.17 -1.0 58,568 + MPMX19_03821 0.17 -2.0 58,568 + MPMX19_03821 0.17 -0.7 58,569 - MPMX19_03821 0.17 +0.2 58,569 - MPMX19_03821 0.17 -1.0 58,569 - MPMX19_03821 0.17 -1.4 58,569 - MPMX19_03821 0.17 -0.3 58,569 - MPMX19_03821 0.17 -0.9 58,569 - MPMX19_03821 0.17 -0.1 58,569 - MPMX19_03821 0.17 -1.0 58,829 + MPMX19_03821 0.26 -0.7 58,829 + MPMX19_03821 0.26 -0.3 58,829 + MPMX19_03821 0.26 -0.8 58,829 + MPMX19_03821 0.26 -0.5 58,829 + MPMX19_03821 0.26 +0.6 58,829 + MPMX19_03821 0.26 -0.1 58,829 + MPMX19_03821 0.26 -2.2 58,829 + MPMX19_03821 0.26 +0.7 58,830 - MPMX19_03821 0.26 +1.2 58,955 + MPMX19_03821 0.30 +0.7 58,955 + MPMX19_03821 0.30 +0.2 58,955 + MPMX19_03821 0.30 -1.4 58,955 + MPMX19_03821 0.30 +0.7 58,955 + MPMX19_03821 0.30 -0.7 58,956 - MPMX19_03821 0.30 -1.0 58,956 - MPMX19_03821 0.30 -1.5 58,956 - MPMX19_03821 0.30 -0.2 58,956 - MPMX19_03821 0.30 -1.8 58,956 - MPMX19_03821 0.30 -1.9 58,956 - MPMX19_03821 0.30 -0.1 58,956 - MPMX19_03821 0.30 -1.0 59,048 + MPMX19_03821 0.33 +1.3
Or see this region's nucleotide sequence