Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03404 and MPMX19_03405 are separated by 291 nucleotides MPMX19_03405 and MPMX19_03406 are separated by 173 nucleotides
MPMX19_03404: MPMX19_03404 - Glutathione-binding protein GsiB, at 791,097 to 792,599
_03404
MPMX19_03405: MPMX19_03405 - hypothetical protein, at 792,891 to 794,300
_03405
MPMX19_03406: MPMX19_03406 - HTH-type transcriptional regulator HdfR, at 794,474 to 795,430
_03406
Position (kb) 792
793
794
795 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 791.992 kb on + strand, within MPMX19_03404 at 791.992 kb on + strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 792.433 kb on + strand, within MPMX19_03404 at 792.434 kb on - strand, within MPMX19_03404 at 792.434 kb on - strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.446 kb on - strand, within MPMX19_03404 at 792.446 kb on - strand, within MPMX19_03404 at 792.446 kb on - strand, within MPMX19_03404 at 792.446 kb on - strand, within MPMX19_03404 at 792.796 kb on - strand at 792.838 kb on + strand at 792.839 kb on - strand at 792.863 kb on + strand at 793.031 kb on + strand at 793.031 kb on + strand at 793.032 kb on - strand, within MPMX19_03405 at 793.091 kb on + strand, within MPMX19_03405 at 793.092 kb on - strand, within MPMX19_03405 at 793.092 kb on - strand, within MPMX19_03405 at 793.092 kb on - strand, within MPMX19_03405 at 793.092 kb on - strand, within MPMX19_03405 at 793.270 kb on + strand, within MPMX19_03405 at 793.271 kb on - strand, within MPMX19_03405 at 793.271 kb on - strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.471 kb on + strand, within MPMX19_03405 at 793.471 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.834 kb on + strand, within MPMX19_03405 at 793.835 kb on - strand, within MPMX19_03405 at 793.835 kb on - strand, within MPMX19_03405 at 793.835 kb on - strand, within MPMX19_03405 at 793.867 kb on + strand, within MPMX19_03405 at 793.867 kb on + strand, within MPMX19_03405 at 793.867 kb on + strand, within MPMX19_03405 at 793.867 kb on + strand, within MPMX19_03405 at 793.867 kb on + strand, within MPMX19_03405 at 793.867 kb on + strand, within MPMX19_03405 at 793.868 kb on - strand, within MPMX19_03405 at 793.868 kb on - strand, within MPMX19_03405 at 793.868 kb on - strand, within MPMX19_03405 at 793.868 kb on - strand, within MPMX19_03405 at 793.868 kb on - strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.987 kb on + strand, within MPMX19_03405 at 793.988 kb on - strand, within MPMX19_03405 at 793.988 kb on - strand, within MPMX19_03405 at 793.988 kb on - strand, within MPMX19_03405 at 793.988 kb on - strand, within MPMX19_03405 at 793.988 kb on - strand, within MPMX19_03405 at 793.988 kb on - strand, within MPMX19_03405 at 793.988 kb on - strand, within MPMX19_03405 at 794.095 kb on + strand, within MPMX19_03405 at 794.095 kb on + strand, within MPMX19_03405 at 794.095 kb on + strand, within MPMX19_03405 at 794.095 kb on + strand, within MPMX19_03405 at 794.096 kb on - strand, within MPMX19_03405 at 794.096 kb on - strand, within MPMX19_03405 at 794.096 kb on - strand, within MPMX19_03405 at 794.096 kb on - strand, within MPMX19_03405 at 794.096 kb on - strand, within MPMX19_03405 at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.422 kb on + strand at 794.423 kb on - strand at 794.423 kb on - strand at 794.423 kb on - strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.427 kb on + strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 794.428 kb on - strand at 795.121 kb on + strand, within MPMX19_03406 at 795.247 kb on + strand, within MPMX19_03406 at 795.247 kb on + strand, within MPMX19_03406 at 795.247 kb on + strand, within MPMX19_03406 at 795.247 kb on + strand, within MPMX19_03406 at 795.247 kb on + strand, within MPMX19_03406 at 795.247 kb on + strand, within MPMX19_03406 at 795.248 kb on - strand, within MPMX19_03406 at 795.248 kb on - strand, within MPMX19_03406 at 795.248 kb on - strand, within MPMX19_03406 at 795.248 kb on - strand, within MPMX19_03406 at 795.248 kb on - strand, within MPMX19_03406
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 791,992 + MPMX19_03404 0.60 -2.3 791,992 + MPMX19_03404 0.60 -1.0 791,993 - MPMX19_03404 0.60 +0.2 791,993 - MPMX19_03404 0.60 -1.8 791,993 - MPMX19_03404 0.60 -0.9 791,993 - MPMX19_03404 0.60 -0.2 791,993 - MPMX19_03404 0.60 -0.9 791,993 - MPMX19_03404 0.60 -0.0 792,433 + MPMX19_03404 0.89 -1.1 792,434 - MPMX19_03404 0.89 -0.4 792,434 - MPMX19_03404 0.89 -0.2 792,445 + MPMX19_03404 0.90 -0.2 792,445 + MPMX19_03404 0.90 +0.4 792,445 + MPMX19_03404 0.90 -1.6 792,445 + MPMX19_03404 0.90 -0.0 792,445 + MPMX19_03404 0.90 -0.1 792,445 + MPMX19_03404 0.90 -1.4 792,445 + MPMX19_03404 0.90 -0.9 792,445 + MPMX19_03404 0.90 -0.1 792,445 + MPMX19_03404 0.90 -0.8 792,445 + MPMX19_03404 0.90 -1.1 792,445 + MPMX19_03404 0.90 -0.9 792,445 + MPMX19_03404 0.90 -0.2 792,445 + MPMX19_03404 0.90 -0.8 792,446 - MPMX19_03404 0.90 +1.2 792,446 - MPMX19_03404 0.90 +0.1 792,446 - MPMX19_03404 0.90 -0.8 792,446 - MPMX19_03404 0.90 +0.0 792,796 - -0.0 792,838 + -1.3 792,839 - -1.0 792,863 + -0.1 793,031 + -0.5 793,031 + -2.8 793,032 - MPMX19_03405 0.10 -0.3 793,091 + MPMX19_03405 0.14 -1.3 793,092 - MPMX19_03405 0.14 +0.4 793,092 - MPMX19_03405 0.14 +0.6 793,092 - MPMX19_03405 0.14 -0.5 793,092 - MPMX19_03405 0.14 +1.0 793,270 + MPMX19_03405 0.27 +0.4 793,271 - MPMX19_03405 0.27 -0.1 793,271 - MPMX19_03405 0.27 -2.8 793,339 + MPMX19_03405 0.32 -0.3 793,339 + MPMX19_03405 0.32 -3.3 793,339 + MPMX19_03405 0.32 -1.5 793,339 + MPMX19_03405 0.32 -1.1 793,339 + MPMX19_03405 0.32 -0.4 793,339 + MPMX19_03405 0.32 -0.4 793,340 - MPMX19_03405 0.32 -0.4 793,340 - MPMX19_03405 0.32 -0.3 793,340 - MPMX19_03405 0.32 -2.1 793,340 - MPMX19_03405 0.32 -0.6 793,340 - MPMX19_03405 0.32 -0.8 793,340 - MPMX19_03405 0.32 -0.1 793,340 - MPMX19_03405 0.32 +1.6 793,340 - MPMX19_03405 0.32 -0.3 793,471 + MPMX19_03405 0.41 +0.4 793,471 + MPMX19_03405 0.41 -2.2 793,834 + MPMX19_03405 0.67 -1.6 793,834 + MPMX19_03405 0.67 -0.8 793,834 + MPMX19_03405 0.67 -0.0 793,834 + MPMX19_03405 0.67 +0.2 793,834 + MPMX19_03405 0.67 -1.3 793,834 + MPMX19_03405 0.67 -0.0 793,834 + MPMX19_03405 0.67 -2.6 793,834 + MPMX19_03405 0.67 -0.3 793,834 + MPMX19_03405 0.67 +0.5 793,834 + MPMX19_03405 0.67 -0.6 793,835 - MPMX19_03405 0.67 -1.6 793,835 - MPMX19_03405 0.67 -1.3 793,835 - MPMX19_03405 0.67 -2.1 793,867 + MPMX19_03405 0.69 -0.0 793,867 + MPMX19_03405 0.69 -0.8 793,867 + MPMX19_03405 0.69 -0.4 793,867 + MPMX19_03405 0.69 -0.3 793,867 + MPMX19_03405 0.69 -1.1 793,867 + MPMX19_03405 0.69 -0.0 793,868 - MPMX19_03405 0.69 -0.0 793,868 - MPMX19_03405 0.69 -1.0 793,868 - MPMX19_03405 0.69 -0.6 793,868 - MPMX19_03405 0.69 +0.3 793,868 - MPMX19_03405 0.69 +1.6 793,987 + MPMX19_03405 0.78 -0.3 793,987 + MPMX19_03405 0.78 -1.6 793,987 + MPMX19_03405 0.78 +0.1 793,987 + MPMX19_03405 0.78 -0.7 793,987 + MPMX19_03405 0.78 -0.4 793,987 + MPMX19_03405 0.78 +1.1 793,987 + MPMX19_03405 0.78 -1.5 793,987 + MPMX19_03405 0.78 -0.3 793,987 + MPMX19_03405 0.78 +0.6 793,987 + MPMX19_03405 0.78 -0.6 793,987 + MPMX19_03405 0.78 -1.3 793,987 + MPMX19_03405 0.78 -1.3 793,987 + MPMX19_03405 0.78 +1.2 793,988 - MPMX19_03405 0.78 -0.0 793,988 - MPMX19_03405 0.78 -0.4 793,988 - MPMX19_03405 0.78 +1.0 793,988 - MPMX19_03405 0.78 -1.0 793,988 - MPMX19_03405 0.78 -0.6 793,988 - MPMX19_03405 0.78 -0.9 793,988 - MPMX19_03405 0.78 -1.7 794,095 + MPMX19_03405 0.85 -0.9 794,095 + MPMX19_03405 0.85 -0.1 794,095 + MPMX19_03405 0.85 -2.1 794,095 + MPMX19_03405 0.85 +0.5 794,096 - MPMX19_03405 0.85 -0.3 794,096 - MPMX19_03405 0.85 +0.7 794,096 - MPMX19_03405 0.85 -0.4 794,096 - MPMX19_03405 0.85 +0.4 794,096 - MPMX19_03405 0.85 -1.0 794,422 + +0.2 794,422 + -0.6 794,422 + -1.3 794,422 + -0.6 794,422 + +0.6 794,422 + -0.0 794,422 + -1.1 794,422 + -1.3 794,422 + -1.0 794,422 + -0.8 794,422 + -0.6 794,422 + +0.2 794,422 + -1.4 794,423 - -1.6 794,423 - -1.1 794,423 - +0.2 794,427 + +1.0 794,427 + -0.6 794,427 + -0.3 794,427 + -0.0 794,427 + +0.6 794,427 + -1.3 794,427 + -0.3 794,427 + -0.0 794,427 + -1.5 794,427 + -0.3 794,427 + -0.0 794,427 + -1.8 794,427 + -0.4 794,427 + +0.6 794,427 + -0.4 794,427 + +0.6 794,427 + -0.8 794,427 + -1.0 794,427 + +1.0 794,427 + +0.1 794,427 + +0.1 794,428 - -0.8 794,428 - +0.2 794,428 - -0.7 794,428 - +3.6 794,428 - -1.4 794,428 - -0.0 794,428 - -0.0 794,428 - -1.8 794,428 - -0.6 794,428 - -1.5 794,428 - -1.1 794,428 - -1.5 794,428 - +0.6 794,428 - -0.1 794,428 - -1.4 794,428 - -0.4 794,428 - +0.2 795,121 + MPMX19_03406 0.68 -2.5 795,247 + MPMX19_03406 0.81 -1.0 795,247 + MPMX19_03406 0.81 -1.0 795,247 + MPMX19_03406 0.81 +0.3 795,247 + MPMX19_03406 0.81 -0.5 795,247 + MPMX19_03406 0.81 -0.8 795,247 + MPMX19_03406 0.81 -1.5 795,248 - MPMX19_03406 0.81 -0.0 795,248 - MPMX19_03406 0.81 -1.0 795,248 - MPMX19_03406 0.81 -0.0 795,248 - MPMX19_03406 0.81 -0.0 795,248 - MPMX19_03406 0.81 -0.4
Or see this region's nucleotide sequence