Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03163 and MPMX19_03164 are separated by 7 nucleotides MPMX19_03164 and MPMX19_03165 overlap by 1 nucleotides MPMX19_03165 and MPMX19_03166 are separated by 152 nucleotides MPMX19_03166 and MPMX19_03167 are separated by 265 nucleotides
MPMX19_03163: MPMX19_03163 - hypothetical protein, at 455,822 to 456,502
_03163
MPMX19_03164: MPMX19_03164 - hypothetical protein, at 456,510 to 456,827
_03164
MPMX19_03165: MPMX19_03165 - hypothetical protein, at 456,827 to 457,066
_03165
MPMX19_03166: MPMX19_03166 - Fumarate hydratase class I, aerobic, at 457,219 to 458,844
_03166
MPMX19_03167: MPMX19_03167 - D-alanine--D-alanyl carrier protein ligase, at 459,110 to 463,228
_03167
Position (kb) 457
458
459 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.235 kb on + strand, within MPMX19_03163 at 456.235 kb on + strand, within MPMX19_03163 at 456.236 kb on - strand, within MPMX19_03163 at 456.236 kb on - strand, within MPMX19_03163 at 456.236 kb on - strand, within MPMX19_03163 at 456.468 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.508 kb on - strand at 456.508 kb on - strand at 456.508 kb on - strand at 456.508 kb on - strand at 456.607 kb on - strand, within MPMX19_03164 at 456.607 kb on - strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.772 kb on + strand, within MPMX19_03164 at 456.772 kb on + strand, within MPMX19_03164 at 456.772 kb on + strand, within MPMX19_03164 at 456.773 kb on - strand, within MPMX19_03164 at 456.773 kb on - strand, within MPMX19_03164 at 456.810 kb on + strand at 456.810 kb on + strand at 456.810 kb on + strand at 456.810 kb on + strand at 456.810 kb on + strand at 456.810 kb on + strand at 456.811 kb on - strand at 456.811 kb on - strand at 456.811 kb on - strand at 456.811 kb on - strand at 456.828 kb on + strand at 456.828 kb on + strand at 456.828 kb on + strand at 456.828 kb on + strand at 456.829 kb on - strand at 456.829 kb on - strand at 456.829 kb on - strand at 456.829 kb on - strand at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 457.053 kb on + strand at 457.053 kb on + strand at 457.053 kb on + strand at 457.053 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.404 kb on - strand, within MPMX19_03166 at 458.334 kb on - strand, within MPMX19_03166 at 458.381 kb on + strand, within MPMX19_03166 at 458.382 kb on - strand, within MPMX19_03166 at 458.955 kb on - strand at 458.955 kb on - strand at 458.955 kb on - strand at 458.955 kb on - strand at 458.955 kb on - strand at 458.955 kb on - strand at 458.955 kb on - strand at 458.956 kb on + strand at 458.956 kb on + strand at 458.956 kb on + strand at 458.956 kb on + strand at 458.956 kb on + strand at 458.956 kb on + strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.957 kb on - strand at 458.993 kb on + strand at 458.993 kb on + strand at 458.993 kb on + strand at 458.994 kb on - strand at 458.994 kb on - strand at 459.060 kb on - strand at 459.073 kb on - strand at 459.073 kb on - strand at 459.075 kb on + strand at 459.075 kb on + strand at 459.076 kb on - strand at 459.076 kb on - strand at 459.111 kb on + strand at 459.112 kb on - strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.267 kb on + strand at 459.268 kb on - strand at 459.268 kb on - strand at 459.268 kb on - strand at 459.268 kb on - strand at 459.345 kb on + strand at 459.345 kb on + strand at 459.345 kb on + strand at 459.346 kb on - strand at 459.346 kb on - strand at 459.346 kb on - strand at 459.346 kb on - strand at 459.346 kb on - strand at 459.385 kb on + strand at 459.385 kb on + strand at 459.385 kb on + strand at 459.385 kb on + strand at 459.385 kb on + strand at 459.386 kb on - strand at 459.386 kb on - strand at 459.386 kb on - strand at 459.386 kb on - strand at 459.387 kb on + strand at 459.387 kb on + strand at 459.387 kb on + strand at 459.387 kb on + strand at 459.388 kb on - strand at 459.388 kb on - strand at 459.388 kb on - strand at 459.388 kb on - strand at 459.388 kb on - strand at 459.388 kb on - strand at 459.388 kb on - strand at 459.388 kb on - strand at 459.388 kb on - strand at 459.438 kb on + strand at 459.438 kb on + strand at 459.438 kb on + strand at 459.439 kb on - strand at 459.439 kb on - strand at 459.439 kb on - strand at 459.439 kb on - strand at 459.439 kb on - strand at 459.439 kb on - strand at 459.439 kb on - strand at 459.439 kb on - strand at 459.439 kb on - strand at 459.439 kb on - strand at 459.540 kb on + strand, within MPMX19_03167 at 459.541 kb on - strand, within MPMX19_03167 at 459.541 kb on - strand, within MPMX19_03167 at 459.541 kb on - strand, within MPMX19_03167 at 459.541 kb on - strand, within MPMX19_03167 at 459.541 kb on - strand, within MPMX19_03167 at 459.541 kb on - strand, within MPMX19_03167 at 459.607 kb on - strand, within MPMX19_03167 at 459.760 kb on + strand, within MPMX19_03167 at 459.760 kb on + strand, within MPMX19_03167 at 459.760 kb on + strand, within MPMX19_03167 at 459.760 kb on + strand, within MPMX19_03167 at 459.760 kb on + strand, within MPMX19_03167 at 459.760 kb on + strand, within MPMX19_03167 at 459.760 kb on + strand, within MPMX19_03167 at 459.760 kb on + strand, within MPMX19_03167 at 459.761 kb on - strand, within MPMX19_03167 at 459.761 kb on - strand, within MPMX19_03167 at 459.761 kb on - strand, within MPMX19_03167 at 459.761 kb on - strand, within MPMX19_03167 at 459.761 kb on - strand, within MPMX19_03167 at 459.761 kb on - strand, within MPMX19_03167 at 459.815 kb on + strand, within MPMX19_03167 at 459.815 kb on + strand, within MPMX19_03167 at 459.816 kb on - strand, within MPMX19_03167 at 459.816 kb on - strand, within MPMX19_03167
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 456,228 + MPMX19_03163 0.60 -0.0 456,228 + MPMX19_03163 0.60 -0.2 456,228 + MPMX19_03163 0.60 +1.6 456,228 + MPMX19_03163 0.60 +2.6 456,228 + MPMX19_03163 0.60 -2.1 456,228 + MPMX19_03163 0.60 +1.4 456,228 + MPMX19_03163 0.60 +0.6 456,228 + MPMX19_03163 0.60 -0.0 456,228 + MPMX19_03163 0.60 -0.3 456,228 + MPMX19_03163 0.60 +0.8 456,229 - MPMX19_03163 0.60 +1.4 456,229 - MPMX19_03163 0.60 +0.1 456,229 - MPMX19_03163 0.60 -1.1 456,229 - MPMX19_03163 0.60 +0.2 456,229 - MPMX19_03163 0.60 -0.8 456,229 - MPMX19_03163 0.60 +0.2 456,229 - MPMX19_03163 0.60 -0.6 456,229 - MPMX19_03163 0.60 +0.2 456,229 - MPMX19_03163 0.60 -0.2 456,229 - MPMX19_03163 0.60 -0.5 456,235 + MPMX19_03163 0.61 -1.4 456,235 + MPMX19_03163 0.61 -0.8 456,236 - MPMX19_03163 0.61 -0.5 456,236 - MPMX19_03163 0.61 -2.2 456,236 - MPMX19_03163 0.61 +1.6 456,468 + +0.8 456,507 + -0.0 456,507 + -1.0 456,507 + -0.3 456,507 + +1.0 456,507 + +0.2 456,507 + -2.0 456,507 + +0.6 456,508 - +1.3 456,508 - -1.0 456,508 - -0.0 456,508 - +0.4 456,607 - MPMX19_03164 0.31 -1.8 456,607 - MPMX19_03164 0.31 +0.2 456,723 + MPMX19_03164 0.67 +1.1 456,723 + MPMX19_03164 0.67 +1.2 456,723 + MPMX19_03164 0.67 -0.4 456,723 + MPMX19_03164 0.67 -1.1 456,723 + MPMX19_03164 0.67 -1.2 456,723 + MPMX19_03164 0.67 +0.1 456,723 + MPMX19_03164 0.67 -0.8 456,723 + MPMX19_03164 0.67 -0.9 456,723 + MPMX19_03164 0.67 -0.4 456,723 + MPMX19_03164 0.67 -0.6 456,723 + MPMX19_03164 0.67 +0.8 456,723 + MPMX19_03164 0.67 -0.0 456,724 - MPMX19_03164 0.67 +1.0 456,724 - MPMX19_03164 0.67 -0.0 456,724 - MPMX19_03164 0.67 -0.9 456,724 - MPMX19_03164 0.67 -0.5 456,724 - MPMX19_03164 0.67 -1.1 456,724 - MPMX19_03164 0.67 -1.4 456,772 + MPMX19_03164 0.82 -0.2 456,772 + MPMX19_03164 0.82 +1.4 456,772 + MPMX19_03164 0.82 +1.8 456,773 - MPMX19_03164 0.83 -0.7 456,773 - MPMX19_03164 0.83 -0.6 456,810 + -0.8 456,810 + -0.0 456,810 + -0.9 456,810 + -1.1 456,810 + -0.0 456,810 + -0.5 456,811 - -1.3 456,811 - +1.8 456,811 - -0.3 456,811 - -0.4 456,828 + -0.2 456,828 + -0.8 456,828 + -0.2 456,828 + -0.4 456,829 - +0.1 456,829 - -1.7 456,829 - -0.7 456,829 - -1.0 456,864 + MPMX19_03165 0.15 -0.8 456,864 + MPMX19_03165 0.15 -0.2 456,864 + MPMX19_03165 0.15 +0.2 456,864 + MPMX19_03165 0.15 -1.8 456,864 + MPMX19_03165 0.15 -1.6 456,864 + MPMX19_03165 0.15 -0.4 457,053 + +0.2 457,053 + -0.8 457,053 + +0.6 457,053 + -1.6 457,129 + +0.4 457,129 + -1.0 457,129 + -1.4 457,129 + -0.8 457,129 + -0.9 457,129 + -0.8 457,129 + -1.3 457,130 - -0.2 457,130 - -0.6 457,130 - +2.0 457,130 - -0.2 457,130 - +1.6 457,130 - -1.6 457,130 - -0.2 457,130 - -0.4 457,404 - MPMX19_03166 0.11 +1.2 458,334 - MPMX19_03166 0.69 +1.6 458,381 + MPMX19_03166 0.71 -0.6 458,382 - MPMX19_03166 0.72 +1.0 458,955 - -0.4 458,955 - -0.8 458,955 - +0.1 458,955 - -0.3 458,955 - -0.3 458,955 - -1.1 458,955 - +0.2 458,956 + -0.6 458,956 + -0.2 458,956 + +0.2 458,956 + -0.9 458,956 + -0.8 458,956 + -0.4 458,957 - +0.4 458,957 - +0.4 458,957 - -1.1 458,957 - -1.3 458,957 - -2.3 458,957 - -1.1 458,957 - +0.6 458,957 - -1.8 458,957 - -3.0 458,957 - +0.8 458,957 - +2.6 458,957 - -0.8 458,957 - -0.1 458,957 - -2.2 458,957 - +1.0 458,993 + +0.2 458,993 + +0.2 458,993 + +0.2 458,994 - -0.8 458,994 - -0.0 459,060 - +0.6 459,073 - -1.0 459,073 - +0.2 459,075 + -0.9 459,075 + -0.8 459,076 - +1.2 459,076 - -0.4 459,111 + -1.0 459,112 - -0.9 459,267 + -0.6 459,267 + -0.2 459,267 + -0.8 459,267 + +1.6 459,267 + -0.9 459,267 + -1.2 459,267 + -0.6 459,267 + -0.0 459,267 + -1.1 459,267 + +0.2 459,267 + -0.2 459,267 + -1.4 459,267 + -0.2 459,267 + -0.2 459,268 - -0.6 459,268 - -0.8 459,268 - -0.8 459,268 - +0.6 459,345 + +0.2 459,345 + -1.3 459,345 + +0.6 459,346 - -0.4 459,346 - -0.4 459,346 - -1.2 459,346 - -0.4 459,346 - -1.1 459,385 + -0.8 459,385 + -1.2 459,385 + -0.8 459,385 + -0.6 459,385 + -0.6 459,386 - -2.0 459,386 - -1.1 459,386 - -0.1 459,386 - -1.4 459,387 + -0.2 459,387 + -1.0 459,387 + -1.5 459,387 + -1.7 459,388 - -1.6 459,388 - -0.6 459,388 - -0.3 459,388 - -1.8 459,388 - +0.2 459,388 - -2.7 459,388 - +1.0 459,388 - -1.9 459,388 - -1.1 459,438 + -1.5 459,438 + -1.3 459,438 + -2.2 459,439 - -0.6 459,439 - -0.4 459,439 - +0.3 459,439 - -1.5 459,439 - -0.8 459,439 - -0.4 459,439 - -0.0 459,439 - -2.7 459,439 - -1.4 459,439 - +1.0 459,540 + MPMX19_03167 0.10 -0.0 459,541 - MPMX19_03167 0.10 +0.2 459,541 - MPMX19_03167 0.10 -0.4 459,541 - MPMX19_03167 0.10 -1.1 459,541 - MPMX19_03167 0.10 +0.8 459,541 - MPMX19_03167 0.10 -0.4 459,541 - MPMX19_03167 0.10 -2.2 459,607 - MPMX19_03167 0.12 -0.3 459,760 + MPMX19_03167 0.16 -0.2 459,760 + MPMX19_03167 0.16 +0.4 459,760 + MPMX19_03167 0.16 -0.6 459,760 + MPMX19_03167 0.16 -0.6 459,760 + MPMX19_03167 0.16 -0.7 459,760 + MPMX19_03167 0.16 +0.6 459,760 + MPMX19_03167 0.16 +0.6 459,760 + MPMX19_03167 0.16 +1.0 459,761 - MPMX19_03167 0.16 -0.7 459,761 - MPMX19_03167 0.16 -0.8 459,761 - MPMX19_03167 0.16 +0.2 459,761 - MPMX19_03167 0.16 +1.0 459,761 - MPMX19_03167 0.16 -0.2 459,761 - MPMX19_03167 0.16 +0.6 459,815 + MPMX19_03167 0.17 -0.9 459,815 + MPMX19_03167 0.17 -0.2 459,816 - MPMX19_03167 0.17 -1.1 459,816 - MPMX19_03167 0.17 -1.4
Or see this region's nucleotide sequence