Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02893 and MPMX19_02894 are separated by 182 nucleotides MPMX19_02894 and MPMX19_02895 are separated by 311 nucleotides
MPMX19_02893: MPMX19_02893 - putative glucarate transporter, at 146,433 to 147,821
_02893
MPMX19_02894: MPMX19_02894 - putative 5-dehydro-4-deoxyglucarate dehydratase, at 148,004 to 148,915
_02894
MPMX19_02895: MPMX19_02895 - HTH-type transcriptional regulator LutR, at 149,227 to 149,958
_02895
Position (kb)
148
149 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 147.043 kb on + strand, within MPMX19_02893 at 147.044 kb on - strand, within MPMX19_02893 at 147.044 kb on - strand, within MPMX19_02893 at 147.044 kb on - strand, within MPMX19_02893 at 147.044 kb on - strand, within MPMX19_02893 at 147.062 kb on + strand, within MPMX19_02893 at 147.172 kb on + strand, within MPMX19_02893 at 147.172 kb on + strand, within MPMX19_02893 at 147.173 kb on - strand, within MPMX19_02893 at 147.299 kb on - strand, within MPMX19_02893 at 147.514 kb on + strand, within MPMX19_02893 at 147.514 kb on + strand, within MPMX19_02893 at 147.514 kb on + strand, within MPMX19_02893 at 147.514 kb on + strand, within MPMX19_02893 at 147.515 kb on - strand, within MPMX19_02893 at 147.515 kb on - strand, within MPMX19_02893 at 147.515 kb on - strand, within MPMX19_02893 at 147.515 kb on - strand, within MPMX19_02893 at 147.515 kb on - strand, within MPMX19_02893 at 147.515 kb on - strand, within MPMX19_02893 at 147.515 kb on - strand, within MPMX19_02893 at 147.515 kb on - strand, within MPMX19_02893 at 147.533 kb on - strand, within MPMX19_02893 at 147.574 kb on + strand, within MPMX19_02893 at 147.574 kb on + strand, within MPMX19_02893 at 147.574 kb on + strand, within MPMX19_02893 at 147.574 kb on + strand, within MPMX19_02893 at 147.574 kb on + strand, within MPMX19_02893 at 147.574 kb on + strand, within MPMX19_02893 at 147.574 kb on + strand, within MPMX19_02893 at 147.574 kb on + strand, within MPMX19_02893 at 147.574 kb on + strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.575 kb on - strand, within MPMX19_02893 at 147.679 kb on + strand, within MPMX19_02893 at 147.679 kb on + strand, within MPMX19_02893 at 147.680 kb on - strand, within MPMX19_02893 at 147.680 kb on - strand, within MPMX19_02893 at 147.680 kb on - strand, within MPMX19_02893 at 147.680 kb on - strand, within MPMX19_02893 at 147.680 kb on - strand, within MPMX19_02893 at 147.721 kb on + strand at 147.721 kb on + strand at 147.722 kb on - strand at 147.722 kb on - strand at 147.722 kb on - strand at 147.772 kb on + strand at 147.772 kb on + strand at 147.991 kb on + strand at 148.005 kb on + strand at 148.005 kb on + strand at 148.006 kb on - strand at 148.006 kb on - strand at 148.006 kb on - strand at 148.171 kb on - strand, within MPMX19_02894 at 148.171 kb on - strand, within MPMX19_02894 at 148.171 kb on - strand, within MPMX19_02894 at 148.171 kb on - strand, within MPMX19_02894 at 148.236 kb on + strand, within MPMX19_02894 at 148.236 kb on + strand, within MPMX19_02894 at 148.236 kb on + strand, within MPMX19_02894 at 148.237 kb on - strand, within MPMX19_02894 at 148.237 kb on - strand, within MPMX19_02894 at 148.237 kb on - strand, within MPMX19_02894 at 148.320 kb on + strand, within MPMX19_02894 at 148.320 kb on + strand, within MPMX19_02894 at 148.320 kb on + strand, within MPMX19_02894 at 148.321 kb on - strand, within MPMX19_02894 at 148.350 kb on + strand, within MPMX19_02894 at 148.350 kb on + strand, within MPMX19_02894 at 148.351 kb on - strand, within MPMX19_02894 at 148.351 kb on - strand, within MPMX19_02894 at 148.494 kb on + strand, within MPMX19_02894 at 148.494 kb on + strand, within MPMX19_02894 at 148.494 kb on + strand, within MPMX19_02894 at 148.494 kb on + strand, within MPMX19_02894 at 148.494 kb on + strand, within MPMX19_02894 at 148.494 kb on + strand, within MPMX19_02894 at 148.494 kb on + strand, within MPMX19_02894 at 148.495 kb on - strand, within MPMX19_02894 at 148.495 kb on - strand, within MPMX19_02894 at 148.495 kb on - strand, within MPMX19_02894 at 148.653 kb on + strand, within MPMX19_02894 at 148.788 kb on + strand, within MPMX19_02894 at 148.818 kb on + strand, within MPMX19_02894 at 148.819 kb on - strand, within MPMX19_02894 at 148.819 kb on - strand, within MPMX19_02894 at 148.819 kb on - strand, within MPMX19_02894 at 149.072 kb on + strand at 149.171 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 147,043 + MPMX19_02893 0.44 +1.0 147,044 - MPMX19_02893 0.44 +0.1 147,044 - MPMX19_02893 0.44 +0.8 147,044 - MPMX19_02893 0.44 -1.9 147,044 - MPMX19_02893 0.44 -0.4 147,062 + MPMX19_02893 0.45 -0.0 147,172 + MPMX19_02893 0.53 -0.7 147,172 + MPMX19_02893 0.53 -0.0 147,173 - MPMX19_02893 0.53 +1.6 147,299 - MPMX19_02893 0.62 -0.9 147,514 + MPMX19_02893 0.78 +0.5 147,514 + MPMX19_02893 0.78 -1.5 147,514 + MPMX19_02893 0.78 -0.2 147,514 + MPMX19_02893 0.78 -0.3 147,515 - MPMX19_02893 0.78 -1.1 147,515 - MPMX19_02893 0.78 -0.5 147,515 - MPMX19_02893 0.78 -0.7 147,515 - MPMX19_02893 0.78 +0.4 147,515 - MPMX19_02893 0.78 -1.4 147,515 - MPMX19_02893 0.78 -0.6 147,515 - MPMX19_02893 0.78 -1.3 147,515 - MPMX19_02893 0.78 -1.3 147,533 - MPMX19_02893 0.79 -0.5 147,574 + MPMX19_02893 0.82 -1.0 147,574 + MPMX19_02893 0.82 -1.4 147,574 + MPMX19_02893 0.82 -1.3 147,574 + MPMX19_02893 0.82 -1.3 147,574 + MPMX19_02893 0.82 -1.2 147,574 + MPMX19_02893 0.82 +0.7 147,574 + MPMX19_02893 0.82 +0.2 147,574 + MPMX19_02893 0.82 -0.7 147,574 + MPMX19_02893 0.82 +1.0 147,575 - MPMX19_02893 0.82 -2.0 147,575 - MPMX19_02893 0.82 +1.6 147,575 - MPMX19_02893 0.82 -1.6 147,575 - MPMX19_02893 0.82 +0.3 147,575 - MPMX19_02893 0.82 -1.7 147,575 - MPMX19_02893 0.82 -0.9 147,575 - MPMX19_02893 0.82 +0.1 147,575 - MPMX19_02893 0.82 +0.3 147,575 - MPMX19_02893 0.82 +1.6 147,575 - MPMX19_02893 0.82 -0.6 147,679 + MPMX19_02893 0.90 +0.3 147,679 + MPMX19_02893 0.90 -2.0 147,680 - MPMX19_02893 0.90 +0.8 147,680 - MPMX19_02893 0.90 -0.3 147,680 - MPMX19_02893 0.90 +0.4 147,680 - MPMX19_02893 0.90 -0.4 147,680 - MPMX19_02893 0.90 -1.5 147,721 + -0.6 147,721 + +1.1 147,722 - -0.5 147,722 - -0.4 147,722 - -0.7 147,772 + -0.1 147,772 + -0.6 147,991 + +0.7 148,005 + -0.2 148,005 + -1.0 148,006 - -1.0 148,006 - -0.6 148,006 - -1.7 148,171 - MPMX19_02894 0.18 +0.7 148,171 - MPMX19_02894 0.18 -1.3 148,171 - MPMX19_02894 0.18 -1.3 148,171 - MPMX19_02894 0.18 -1.2 148,236 + MPMX19_02894 0.25 +1.4 148,236 + MPMX19_02894 0.25 -0.4 148,236 + MPMX19_02894 0.25 -0.3 148,237 - MPMX19_02894 0.26 -0.6 148,237 - MPMX19_02894 0.26 -0.0 148,237 - MPMX19_02894 0.26 -0.4 148,320 + MPMX19_02894 0.35 -0.1 148,320 + MPMX19_02894 0.35 -0.4 148,320 + MPMX19_02894 0.35 -0.4 148,321 - MPMX19_02894 0.35 +0.1 148,350 + MPMX19_02894 0.38 -0.7 148,350 + MPMX19_02894 0.38 +1.8 148,351 - MPMX19_02894 0.38 -0.9 148,351 - MPMX19_02894 0.38 -1.4 148,494 + MPMX19_02894 0.54 -0.6 148,494 + MPMX19_02894 0.54 +1.3 148,494 + MPMX19_02894 0.54 +0.2 148,494 + MPMX19_02894 0.54 +0.1 148,494 + MPMX19_02894 0.54 -1.2 148,494 + MPMX19_02894 0.54 -0.7 148,494 + MPMX19_02894 0.54 -0.1 148,495 - MPMX19_02894 0.54 -0.4 148,495 - MPMX19_02894 0.54 -0.1 148,495 - MPMX19_02894 0.54 +0.3 148,653 + MPMX19_02894 0.71 +0.7 148,788 + MPMX19_02894 0.86 -1.0 148,818 + MPMX19_02894 0.89 +0.3 148,819 - MPMX19_02894 0.89 -1.1 148,819 - MPMX19_02894 0.89 -0.4 148,819 - MPMX19_02894 0.89 -2.3 149,072 + -0.9 149,171 + -0.1
Or see this region's nucleotide sequence