Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02786 and MPMX19_02787 overlap by 4 nucleotides MPMX19_02787 and MPMX19_02788 are separated by 17 nucleotides MPMX19_02788 and MPMX19_02789 are separated by 149 nucleotides
MPMX19_02786: MPMX19_02786 - hypothetical protein, at 18,526 to 19,581
_02786
MPMX19_02787: MPMX19_02787 - (R)-benzylsuccinyl-CoA dehydrogenase, at 19,578 to 20,774
_02787
MPMX19_02788: MPMX19_02788 - Gluconate 5-dehydrogenase, at 20,792 to 21,559
_02788
MPMX19_02789: MPMX19_02789 - hypothetical protein, at 21,709 to 22,404
_02789
Position (kb) 19
20
21 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 18.696 kb on - strand, within MPMX19_02786 at 18.749 kb on + strand, within MPMX19_02786 at 18.749 kb on + strand, within MPMX19_02786 at 18.750 kb on - strand, within MPMX19_02786 at 18.903 kb on + strand, within MPMX19_02786 at 18.903 kb on + strand, within MPMX19_02786 at 18.903 kb on + strand, within MPMX19_02786 at 18.903 kb on + strand, within MPMX19_02786 at 18.903 kb on + strand, within MPMX19_02786 at 18.903 kb on + strand, within MPMX19_02786 at 18.903 kb on + strand, within MPMX19_02786 at 18.903 kb on + strand, within MPMX19_02786 at 18.903 kb on + strand, within MPMX19_02786 at 18.904 kb on - strand, within MPMX19_02786 at 18.904 kb on - strand, within MPMX19_02786 at 18.904 kb on - strand, within MPMX19_02786 at 18.904 kb on - strand, within MPMX19_02786 at 18.904 kb on - strand, within MPMX19_02786 at 18.904 kb on - strand, within MPMX19_02786 at 18.904 kb on - strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.905 kb on + strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.906 kb on - strand, within MPMX19_02786 at 18.921 kb on - strand, within MPMX19_02786 at 18.986 kb on + strand, within MPMX19_02786 at 18.986 kb on + strand, within MPMX19_02786 at 18.986 kb on + strand, within MPMX19_02786 at 18.986 kb on + strand, within MPMX19_02786 at 18.987 kb on - strand, within MPMX19_02786 at 19.014 kb on - strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.223 kb on + strand, within MPMX19_02786 at 19.224 kb on - strand, within MPMX19_02786 at 19.224 kb on - strand, within MPMX19_02786 at 19.224 kb on - strand, within MPMX19_02786 at 19.224 kb on - strand, within MPMX19_02786 at 19.224 kb on - strand, within MPMX19_02786 at 19.224 kb on - strand, within MPMX19_02786 at 19.224 kb on - strand, within MPMX19_02786 at 19.615 kb on + strand at 19.615 kb on + strand at 19.615 kb on + strand at 19.615 kb on + strand at 19.615 kb on + strand at 19.615 kb on + strand at 19.615 kb on + strand at 19.616 kb on - strand at 19.616 kb on - strand at 19.616 kb on - strand at 19.616 kb on - strand at 19.616 kb on - strand at 19.616 kb on - strand at 19.616 kb on - strand at 19.616 kb on - strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.637 kb on + strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.638 kb on - strand at 19.681 kb on + strand at 19.687 kb on + strand at 19.687 kb on + strand at 19.687 kb on + strand at 19.688 kb on - strand at 19.688 kb on - strand at 19.688 kb on - strand at 19.954 kb on + strand, within MPMX19_02787 at 19.954 kb on + strand, within MPMX19_02787 at 19.955 kb on - strand, within MPMX19_02787 at 19.955 kb on - strand, within MPMX19_02787 at 19.955 kb on - strand, within MPMX19_02787 at 19.955 kb on - strand, within MPMX19_02787 at 19.955 kb on - strand, within MPMX19_02787 at 19.955 kb on - strand, within MPMX19_02787 at 19.955 kb on - strand, within MPMX19_02787 at 20.536 kb on + strand, within MPMX19_02787 at 20.536 kb on + strand, within MPMX19_02787 at 20.536 kb on + strand, within MPMX19_02787 at 20.536 kb on + strand, within MPMX19_02787 at 20.741 kb on - strand at 20.741 kb on - strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.847 kb on + strand at 20.848 kb on - strand at 20.848 kb on - strand at 20.848 kb on - strand at 20.848 kb on - strand at 20.848 kb on - strand at 20.988 kb on + strand, within MPMX19_02788 at 20.988 kb on + strand, within MPMX19_02788 at 21.084 kb on + strand, within MPMX19_02788 at 21.084 kb on + strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.085 kb on - strand, within MPMX19_02788 at 21.215 kb on - strand, within MPMX19_02788 at 21.697 kb on - strand at 21.709 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 18,696 - MPMX19_02786 0.16 +0.1 18,749 + MPMX19_02786 0.21 -0.2 18,749 + MPMX19_02786 0.21 -0.0 18,750 - MPMX19_02786 0.21 -0.6 18,903 + MPMX19_02786 0.36 +1.2 18,903 + MPMX19_02786 0.36 -1.7 18,903 + MPMX19_02786 0.36 +0.3 18,903 + MPMX19_02786 0.36 -0.9 18,903 + MPMX19_02786 0.36 -0.2 18,903 + MPMX19_02786 0.36 +0.6 18,903 + MPMX19_02786 0.36 +0.8 18,903 + MPMX19_02786 0.36 -1.5 18,903 + MPMX19_02786 0.36 -0.2 18,904 - MPMX19_02786 0.36 -1.6 18,904 - MPMX19_02786 0.36 -0.7 18,904 - MPMX19_02786 0.36 -0.0 18,904 - MPMX19_02786 0.36 -0.7 18,904 - MPMX19_02786 0.36 -1.0 18,904 - MPMX19_02786 0.36 +2.0 18,904 - MPMX19_02786 0.36 -0.6 18,905 + MPMX19_02786 0.36 -0.0 18,905 + MPMX19_02786 0.36 -1.2 18,905 + MPMX19_02786 0.36 +0.3 18,905 + MPMX19_02786 0.36 -1.0 18,905 + MPMX19_02786 0.36 +0.3 18,905 + MPMX19_02786 0.36 -0.2 18,905 + MPMX19_02786 0.36 -0.9 18,905 + MPMX19_02786 0.36 -1.1 18,905 + MPMX19_02786 0.36 -1.6 18,905 + MPMX19_02786 0.36 -2.2 18,905 + MPMX19_02786 0.36 -0.0 18,905 + MPMX19_02786 0.36 -1.3 18,905 + MPMX19_02786 0.36 -1.4 18,905 + MPMX19_02786 0.36 -1.7 18,905 + MPMX19_02786 0.36 +0.3 18,905 + MPMX19_02786 0.36 -0.7 18,905 + MPMX19_02786 0.36 +0.6 18,905 + MPMX19_02786 0.36 +0.2 18,905 + MPMX19_02786 0.36 -0.2 18,905 + MPMX19_02786 0.36 -0.9 18,905 + MPMX19_02786 0.36 -1.0 18,905 + MPMX19_02786 0.36 -0.6 18,906 - MPMX19_02786 0.36 -0.5 18,906 - MPMX19_02786 0.36 -1.1 18,906 - MPMX19_02786 0.36 +1.0 18,906 - MPMX19_02786 0.36 +0.7 18,906 - MPMX19_02786 0.36 +0.5 18,906 - MPMX19_02786 0.36 -0.6 18,906 - MPMX19_02786 0.36 +0.3 18,906 - MPMX19_02786 0.36 -2.3 18,906 - MPMX19_02786 0.36 +0.6 18,906 - MPMX19_02786 0.36 +0.4 18,906 - MPMX19_02786 0.36 +0.8 18,906 - MPMX19_02786 0.36 +0.4 18,906 - MPMX19_02786 0.36 -0.4 18,906 - MPMX19_02786 0.36 +1.2 18,906 - MPMX19_02786 0.36 +0.3 18,906 - MPMX19_02786 0.36 -0.6 18,906 - MPMX19_02786 0.36 -0.6 18,906 - MPMX19_02786 0.36 -0.8 18,906 - MPMX19_02786 0.36 +0.8 18,906 - MPMX19_02786 0.36 -0.8 18,906 - MPMX19_02786 0.36 -1.2 18,906 - MPMX19_02786 0.36 +0.3 18,906 - MPMX19_02786 0.36 -0.1 18,906 - MPMX19_02786 0.36 -1.2 18,906 - MPMX19_02786 0.36 -0.6 18,906 - MPMX19_02786 0.36 -0.6 18,906 - MPMX19_02786 0.36 -0.6 18,906 - MPMX19_02786 0.36 +0.8 18,921 - MPMX19_02786 0.37 -1.6 18,986 + MPMX19_02786 0.44 +1.0 18,986 + MPMX19_02786 0.44 -1.3 18,986 + MPMX19_02786 0.44 -1.2 18,986 + MPMX19_02786 0.44 -2.1 18,987 - MPMX19_02786 0.44 -1.4 19,014 - MPMX19_02786 0.46 +0.6 19,223 + MPMX19_02786 0.66 +1.2 19,223 + MPMX19_02786 0.66 -0.9 19,223 + MPMX19_02786 0.66 -0.4 19,223 + MPMX19_02786 0.66 -0.9 19,223 + MPMX19_02786 0.66 -0.2 19,223 + MPMX19_02786 0.66 -0.7 19,223 + MPMX19_02786 0.66 -0.7 19,223 + MPMX19_02786 0.66 -0.0 19,223 + MPMX19_02786 0.66 -1.6 19,223 + MPMX19_02786 0.66 -0.6 19,223 + MPMX19_02786 0.66 -0.2 19,223 + MPMX19_02786 0.66 +0.8 19,224 - MPMX19_02786 0.66 -0.7 19,224 - MPMX19_02786 0.66 +1.4 19,224 - MPMX19_02786 0.66 +0.6 19,224 - MPMX19_02786 0.66 -1.5 19,224 - MPMX19_02786 0.66 -0.2 19,224 - MPMX19_02786 0.66 +0.1 19,224 - MPMX19_02786 0.66 -0.7 19,615 + -0.4 19,615 + +0.3 19,615 + -1.9 19,615 + -0.7 19,615 + +1.6 19,615 + -1.2 19,615 + -1.3 19,616 - -0.1 19,616 - -0.5 19,616 - +0.8 19,616 - -0.2 19,616 - +0.1 19,616 - -0.6 19,616 - -1.5 19,616 - +1.3 19,637 + +0.3 19,637 + -0.1 19,637 + +1.1 19,637 + +0.5 19,637 + -0.9 19,637 + -0.2 19,637 + -0.3 19,637 + -0.4 19,637 + -0.3 19,637 + +1.6 19,637 + +0.3 19,637 + -2.0 19,638 - -0.7 19,638 - +1.0 19,638 - -1.1 19,638 - -0.6 19,638 - +0.4 19,638 - -1.3 19,638 - -1.1 19,638 - -1.2 19,638 - +0.3 19,638 - -1.7 19,638 - -0.1 19,638 - +0.3 19,638 - +0.4 19,638 - -1.5 19,681 + -0.3 19,687 + -0.0 19,687 + -0.8 19,687 + -1.0 19,688 - -1.3 19,688 - -0.9 19,688 - -0.7 19,954 + MPMX19_02787 0.31 -0.2 19,954 + MPMX19_02787 0.31 -0.2 19,955 - MPMX19_02787 0.31 -0.7 19,955 - MPMX19_02787 0.31 -1.8 19,955 - MPMX19_02787 0.31 -1.8 19,955 - MPMX19_02787 0.31 -1.5 19,955 - MPMX19_02787 0.31 -0.0 19,955 - MPMX19_02787 0.31 -0.9 19,955 - MPMX19_02787 0.31 +0.1 20,536 + MPMX19_02787 0.80 -1.7 20,536 + MPMX19_02787 0.80 -0.6 20,536 + MPMX19_02787 0.80 -1.1 20,536 + MPMX19_02787 0.80 -1.2 20,741 - +0.7 20,741 - -0.0 20,847 + -0.6 20,847 + -0.0 20,847 + +1.1 20,847 + -1.9 20,847 + +1.6 20,847 + +0.1 20,847 + -1.1 20,847 + -0.2 20,847 + +0.6 20,847 + -1.2 20,847 + -1.0 20,847 + -0.0 20,848 - +0.4 20,848 - -0.8 20,848 - -0.7 20,848 - -0.0 20,848 - -0.7 20,988 + MPMX19_02788 0.26 -0.5 20,988 + MPMX19_02788 0.26 -1.7 21,084 + MPMX19_02788 0.38 -0.9 21,084 + MPMX19_02788 0.38 +1.0 21,085 - MPMX19_02788 0.38 -1.5 21,085 - MPMX19_02788 0.38 +0.8 21,085 - MPMX19_02788 0.38 -2.5 21,085 - MPMX19_02788 0.38 -0.7 21,085 - MPMX19_02788 0.38 -0.2 21,085 - MPMX19_02788 0.38 +0.3 21,085 - MPMX19_02788 0.38 -3.1 21,085 - MPMX19_02788 0.38 -0.6 21,085 - MPMX19_02788 0.38 +1.6 21,085 - MPMX19_02788 0.38 +0.3 21,215 - MPMX19_02788 0.55 -0.4 21,697 - -1.5 21,709 - +0.8
Or see this region's nucleotide sequence