Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02352

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02348 and MPMX19_02349 overlap by 8 nucleotidesMPMX19_02349 and MPMX19_02350 are separated by 8 nucleotidesMPMX19_02350 and MPMX19_02351 overlap by 4 nucleotidesMPMX19_02351 and MPMX19_02352 are separated by 2 nucleotidesMPMX19_02352 and MPMX19_02353 overlap by 4 nucleotidesMPMX19_02353 and MPMX19_02354 overlap by 4 nucleotides MPMX19_02348: MPMX19_02348 - hypothetical protein, at 2,475,706 to 2,475,888 _02348 MPMX19_02349: MPMX19_02349 - hypothetical protein, at 2,475,881 to 2,476,120 _02349 MPMX19_02350: MPMX19_02350 - hypothetical protein, at 2,476,129 to 2,476,404 _02350 MPMX19_02351: MPMX19_02351 - hypothetical protein, at 2,476,401 to 2,476,868 _02351 MPMX19_02352: MPMX19_02352 - hypothetical protein, at 2,476,871 to 2,477,155 _02352 MPMX19_02353: MPMX19_02353 - hypothetical protein, at 2,477,152 to 2,477,538 _02353 MPMX19_02354: MPMX19_02354 - hypothetical protein, at 2,477,535 to 2,478,500 _02354 Position (kb) 2476 2477 2478Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2476.099 kb on + strandat 2476.099 kb on + strandat 2476.099 kb on + strandat 2476.100 kb on - strandat 2476.100 kb on - strandat 2476.145 kb on + strandat 2476.145 kb on + strandat 2476.145 kb on + strandat 2476.145 kb on + strandat 2476.145 kb on + strandat 2476.146 kb on - strandat 2476.146 kb on - strandat 2476.146 kb on - strandat 2476.146 kb on - strandat 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.004 kb on + strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.005 kb on - strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.067 kb on + strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.068 kb on - strand, within MPMX19_02352at 2477.231 kb on + strand, within MPMX19_02353at 2477.231 kb on + strand, within MPMX19_02353at 2477.231 kb on + strand, within MPMX19_02353at 2477.231 kb on + strand, within MPMX19_02353at 2477.231 kb on + strand, within MPMX19_02353at 2477.231 kb on + strand, within MPMX19_02353at 2477.231 kb on + strand, within MPMX19_02353at 2477.231 kb on + strand, within MPMX19_02353at 2477.231 kb on + strand, within MPMX19_02353at 2477.232 kb on - strand, within MPMX19_02353at 2477.232 kb on - strand, within MPMX19_02353at 2477.232 kb on - strand, within MPMX19_02353at 2477.232 kb on - strand, within MPMX19_02353at 2477.232 kb on - strand, within MPMX19_02353at 2477.232 kb on - strand, within MPMX19_02353at 2477.232 kb on - strand, within MPMX19_02353at 2477.330 kb on + strand, within MPMX19_02353at 2477.330 kb on + strand, within MPMX19_02353at 2477.782 kb on + strand, within MPMX19_02354at 2477.783 kb on - strand, within MPMX19_02354at 2477.814 kb on + strand, within MPMX19_02354at 2477.815 kb on - strand, within MPMX19_02354at 2477.815 kb on - strand, within MPMX19_02354at 2477.815 kb on - strand, within MPMX19_02354at 2477.834 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.868 kb on + strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.869 kb on - strand, within MPMX19_02354at 2477.899 kb on + strand, within MPMX19_02354at 2477.899 kb on + strand, within MPMX19_02354at 2477.899 kb on + strand, within MPMX19_02354at 2477.900 kb on - strand, within MPMX19_02354at 2477.900 kb on - strand, within MPMX19_02354at 2477.900 kb on - strand, within MPMX19_02354at 2477.900 kb on - strand, within MPMX19_02354at 2477.900 kb on - strand, within MPMX19_02354at 2477.900 kb on - strand, within MPMX19_02354at 2477.969 kb on + strand, within MPMX19_02354at 2477.969 kb on + strand, within MPMX19_02354at 2477.969 kb on + strand, within MPMX19_02354at 2477.969 kb on + strand, within MPMX19_02354at 2477.969 kb on + strand, within MPMX19_02354at 2477.970 kb on - strand, within MPMX19_02354

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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2,476,099 + -0.8
2,476,099 + +0.2
2,476,099 + -0.3
2,476,100 - -0.0
2,476,100 - -1.6
2,476,145 + +2.1
2,476,145 + -1.4
2,476,145 + -2.2
2,476,145 + -1.5
2,476,145 + -1.0
2,476,146 - -0.9
2,476,146 - -1.1
2,476,146 - -1.0
2,476,146 - -2.5
2,477,004 + MPMX19_02352 0.47 -1.0
2,477,004 + MPMX19_02352 0.47 -1.3
2,477,004 + MPMX19_02352 0.47 -1.3
2,477,004 + MPMX19_02352 0.47 -0.3
2,477,004 + MPMX19_02352 0.47 +0.2
2,477,004 + MPMX19_02352 0.47 -1.2
2,477,004 + MPMX19_02352 0.47 -1.5
2,477,004 + MPMX19_02352 0.47 +0.5
2,477,004 + MPMX19_02352 0.47 -3.0
2,477,004 + MPMX19_02352 0.47 -1.7
2,477,004 + MPMX19_02352 0.47 -0.6
2,477,004 + MPMX19_02352 0.47 +0.1
2,477,004 + MPMX19_02352 0.47 -0.2
2,477,004 + MPMX19_02352 0.47 +0.7
2,477,004 + MPMX19_02352 0.47 -0.0
2,477,004 + MPMX19_02352 0.47 -0.5
2,477,004 + MPMX19_02352 0.47 +0.2
2,477,004 + MPMX19_02352 0.47 -1.0
2,477,004 + MPMX19_02352 0.47 -0.2
2,477,004 + MPMX19_02352 0.47 -0.3
2,477,004 + MPMX19_02352 0.47 -0.9
2,477,004 + MPMX19_02352 0.47 -2.7
2,477,004 + MPMX19_02352 0.47 -0.0
2,477,004 + MPMX19_02352 0.47 +0.2
2,477,004 + MPMX19_02352 0.47 +0.1
2,477,004 + MPMX19_02352 0.47 +0.4
2,477,004 + MPMX19_02352 0.47 +0.7
2,477,004 + MPMX19_02352 0.47 -1.3
2,477,004 + MPMX19_02352 0.47 -0.8
2,477,004 + MPMX19_02352 0.47 -0.4
2,477,005 - MPMX19_02352 0.47 -1.0
2,477,005 - MPMX19_02352 0.47 -2.0
2,477,005 - MPMX19_02352 0.47 -0.2
2,477,005 - MPMX19_02352 0.47 -1.6
2,477,005 - MPMX19_02352 0.47 -1.2
2,477,005 - MPMX19_02352 0.47 +2.1
2,477,005 - MPMX19_02352 0.47 +0.7
2,477,005 - MPMX19_02352 0.47 -0.3
2,477,005 - MPMX19_02352 0.47 -2.2
2,477,005 - MPMX19_02352 0.47 -0.3
2,477,005 - MPMX19_02352 0.47 +0.1
2,477,005 - MPMX19_02352 0.47 +2.1
2,477,005 - MPMX19_02352 0.47 -1.0
2,477,005 - MPMX19_02352 0.47 +0.5
2,477,005 - MPMX19_02352 0.47 -0.7
2,477,005 - MPMX19_02352 0.47 -1.5
2,477,005 - MPMX19_02352 0.47 -1.5
2,477,005 - MPMX19_02352 0.47 +0.9
2,477,005 - MPMX19_02352 0.47 +1.0
2,477,005 - MPMX19_02352 0.47 +0.5
2,477,005 - MPMX19_02352 0.47 -0.2
2,477,005 - MPMX19_02352 0.47 -1.1
2,477,005 - MPMX19_02352 0.47 +1.0
2,477,005 - MPMX19_02352 0.47 -0.7
2,477,005 - MPMX19_02352 0.47 -0.6
2,477,005 - MPMX19_02352 0.47 -0.3
2,477,005 - MPMX19_02352 0.47 -0.8
2,477,005 - MPMX19_02352 0.47 -1.0
2,477,005 - MPMX19_02352 0.47 -1.0
2,477,005 - MPMX19_02352 0.47 +0.4
2,477,005 - MPMX19_02352 0.47 +1.5
2,477,005 - MPMX19_02352 0.47 -0.4
2,477,005 - MPMX19_02352 0.47 -0.8
2,477,067 + MPMX19_02352 0.69 -1.3
2,477,067 + MPMX19_02352 0.69 -0.0
2,477,067 + MPMX19_02352 0.69 -0.9
2,477,067 + MPMX19_02352 0.69 +0.1
2,477,067 + MPMX19_02352 0.69 -0.3
2,477,067 + MPMX19_02352 0.69 -0.5
2,477,067 + MPMX19_02352 0.69 +0.5
2,477,067 + MPMX19_02352 0.69 +0.3
2,477,067 + MPMX19_02352 0.69 +0.8
2,477,067 + MPMX19_02352 0.69 -0.8
2,477,067 + MPMX19_02352 0.69 -0.7
2,477,067 + MPMX19_02352 0.69 -1.5
2,477,067 + MPMX19_02352 0.69 +0.5
2,477,067 + MPMX19_02352 0.69 -0.2
2,477,067 + MPMX19_02352 0.69 +0.1
2,477,067 + MPMX19_02352 0.69 -0.6
2,477,067 + MPMX19_02352 0.69 -0.0
2,477,067 + MPMX19_02352 0.69 +0.7
2,477,067 + MPMX19_02352 0.69 -0.0
2,477,067 + MPMX19_02352 0.69 +0.2
2,477,067 + MPMX19_02352 0.69 -0.3
2,477,067 + MPMX19_02352 0.69 -0.0
2,477,067 + MPMX19_02352 0.69 -0.6
2,477,067 + MPMX19_02352 0.69 -1.3
2,477,067 + MPMX19_02352 0.69 -0.5
2,477,067 + MPMX19_02352 0.69 -0.2
2,477,067 + MPMX19_02352 0.69 -0.2
2,477,067 + MPMX19_02352 0.69 -1.0
2,477,067 + MPMX19_02352 0.69 -0.9
2,477,067 + MPMX19_02352 0.69 -0.6
2,477,067 + MPMX19_02352 0.69 +0.4
2,477,067 + MPMX19_02352 0.69 -2.5
2,477,067 + MPMX19_02352 0.69 -0.3
2,477,068 - MPMX19_02352 0.69 -0.5
2,477,068 - MPMX19_02352 0.69 +1.2
2,477,068 - MPMX19_02352 0.69 -0.9
2,477,068 - MPMX19_02352 0.69 -0.5
2,477,068 - MPMX19_02352 0.69 -0.3
2,477,068 - MPMX19_02352 0.69 +0.7
2,477,068 - MPMX19_02352 0.69 -0.9
2,477,068 - MPMX19_02352 0.69 +1.1
2,477,068 - MPMX19_02352 0.69 -0.6
2,477,068 - MPMX19_02352 0.69 -2.3
2,477,068 - MPMX19_02352 0.69 +1.2
2,477,068 - MPMX19_02352 0.69 -1.4
2,477,068 - MPMX19_02352 0.69 -1.9
2,477,068 - MPMX19_02352 0.69 +1.0
2,477,068 - MPMX19_02352 0.69 +1.0
2,477,068 - MPMX19_02352 0.69 +1.0
2,477,068 - MPMX19_02352 0.69 -0.0
2,477,068 - MPMX19_02352 0.69 +0.1
2,477,068 - MPMX19_02352 0.69 -0.5
2,477,231 + MPMX19_02353 0.20 +0.2
2,477,231 + MPMX19_02353 0.20 -1.0
2,477,231 + MPMX19_02353 0.20 -0.3
2,477,231 + MPMX19_02353 0.20 -0.4
2,477,231 + MPMX19_02353 0.20 -0.5
2,477,231 + MPMX19_02353 0.20 -1.7
2,477,231 + MPMX19_02353 0.20 -0.9
2,477,231 + MPMX19_02353 0.20 -1.0
2,477,231 + MPMX19_02353 0.20 -0.6
2,477,232 - MPMX19_02353 0.21 +1.2
2,477,232 - MPMX19_02353 0.21 -0.6
2,477,232 - MPMX19_02353 0.21 +0.2
2,477,232 - MPMX19_02353 0.21 -0.6
2,477,232 - MPMX19_02353 0.21 +0.4
2,477,232 - MPMX19_02353 0.21 -0.5
2,477,232 - MPMX19_02353 0.21 -1.1
2,477,330 + MPMX19_02353 0.46 -0.6
2,477,330 + MPMX19_02353 0.46 -0.7
2,477,782 + MPMX19_02354 0.26 -0.0
2,477,783 - MPMX19_02354 0.26 -1.0
2,477,814 + MPMX19_02354 0.29 +0.7
2,477,815 - MPMX19_02354 0.29 -0.3
2,477,815 - MPMX19_02354 0.29 -0.3
2,477,815 - MPMX19_02354 0.29 +0.2
2,477,834 + MPMX19_02354 0.31 +0.3
2,477,868 + MPMX19_02354 0.34 -2.8
2,477,868 + MPMX19_02354 0.34 +0.2
2,477,868 + MPMX19_02354 0.34 -1.0
2,477,868 + MPMX19_02354 0.34 -0.6
2,477,868 + MPMX19_02354 0.34 -0.5
2,477,868 + MPMX19_02354 0.34 -0.8
2,477,868 + MPMX19_02354 0.34 +0.2
2,477,868 + MPMX19_02354 0.34 +0.2
2,477,868 + MPMX19_02354 0.34 -2.3
2,477,868 + MPMX19_02354 0.34 -2.7
2,477,868 + MPMX19_02354 0.34 -1.0
2,477,868 + MPMX19_02354 0.34 +0.3
2,477,868 + MPMX19_02354 0.34 -0.7
2,477,868 + MPMX19_02354 0.34 +0.2
2,477,869 - MPMX19_02354 0.35 -1.0
2,477,869 - MPMX19_02354 0.35 -1.3
2,477,869 - MPMX19_02354 0.35 +0.3
2,477,869 - MPMX19_02354 0.35 +0.1
2,477,869 - MPMX19_02354 0.35 -0.0
2,477,869 - MPMX19_02354 0.35 -0.2
2,477,869 - MPMX19_02354 0.35 +1.2
2,477,869 - MPMX19_02354 0.35 -1.3
2,477,869 - MPMX19_02354 0.35 -1.2
2,477,869 - MPMX19_02354 0.35 -1.6
2,477,869 - MPMX19_02354 0.35 -1.0
2,477,869 - MPMX19_02354 0.35 +0.1
2,477,899 + MPMX19_02354 0.38 -0.8
2,477,899 + MPMX19_02354 0.38 +0.1
2,477,899 + MPMX19_02354 0.38 -1.2
2,477,900 - MPMX19_02354 0.38 -1.5
2,477,900 - MPMX19_02354 0.38 -0.0
2,477,900 - MPMX19_02354 0.38 -0.2
2,477,900 - MPMX19_02354 0.38 +0.4
2,477,900 - MPMX19_02354 0.38 +0.1
2,477,900 - MPMX19_02354 0.38 +0.2
2,477,969 + MPMX19_02354 0.45 +1.0
2,477,969 + MPMX19_02354 0.45 +0.2
2,477,969 + MPMX19_02354 0.45 -0.8
2,477,969 + MPMX19_02354 0.45 -1.2
2,477,969 + MPMX19_02354 0.45 +0.4
2,477,970 - MPMX19_02354 0.45 -1.3

Or see this region's nucleotide sequence