Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02163

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02161 and MPMX19_02162 are separated by 83 nucleotidesMPMX19_02162 and MPMX19_02163 are separated by 4 nucleotidesMPMX19_02163 and MPMX19_02164 are separated by 4 nucleotides MPMX19_02161: MPMX19_02161 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 2,260,753 to 2,261,538 _02161 MPMX19_02162: MPMX19_02162 - Bifunctional chorismate mutase/prephenate dehydratase, at 2,261,622 to 2,262,488 _02162 MPMX19_02163: MPMX19_02163 - hypothetical protein, at 2,262,493 to 2,262,612 _02163 MPMX19_02164: MPMX19_02164 - NADH pyrophosphatase, at 2,262,617 to 2,263,552 _02164 Position (kb) 2262 2263Strain fitness (log2 ratio) -3 -2 -1 0 1at 2261.579 kb on + strandat 2261.579 kb on + strandat 2261.579 kb on + strandat 2261.579 kb on + strandat 2261.579 kb on + strandat 2261.579 kb on + strandat 2261.579 kb on + strandat 2261.580 kb on - strandat 2261.580 kb on - strandat 2261.580 kb on - strandat 2261.580 kb on - strandat 2261.580 kb on - strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.581 kb on + strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.582 kb on - strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.592 kb on + strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.593 kb on - strandat 2261.596 kb on + strandat 2261.596 kb on + strandat 2261.596 kb on + strandat 2261.596 kb on + strandat 2261.596 kb on + strandat 2261.596 kb on + strandat 2261.596 kb on + strandat 2261.596 kb on + strandat 2261.596 kb on + strandat 2261.596 kb on + strandat 2261.597 kb on - strandat 2261.667 kb on + strandat 2261.667 kb on + strandat 2261.668 kb on - strandat 2261.668 kb on - strandat 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.823 kb on + strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2261.824 kb on - strand, within MPMX19_02162at 2262.090 kb on + strand, within MPMX19_02162at 2262.090 kb on + strand, within MPMX19_02162at 2262.090 kb on + strand, within MPMX19_02162at 2262.090 kb on + strand, within MPMX19_02162at 2262.090 kb on + strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.091 kb on - strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.246 kb on + strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.247 kb on - strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.303 kb on + strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.304 kb on - strand, within MPMX19_02162at 2262.339 kb on + strand, within MPMX19_02162at 2262.339 kb on + strand, within MPMX19_02162at 2262.339 kb on + strand, within MPMX19_02162at 2262.339 kb on + strand, within MPMX19_02162at 2262.339 kb on + strand, within MPMX19_02162at 2262.339 kb on + strand, within MPMX19_02162at 2262.339 kb on + strand, within MPMX19_02162at 2262.339 kb on + strand, within MPMX19_02162at 2262.340 kb on - strand, within MPMX19_02162at 2262.340 kb on - strand, within MPMX19_02162at 2262.340 kb on - strand, within MPMX19_02162at 2262.340 kb on - strand, within MPMX19_02162at 2262.340 kb on - strand, within MPMX19_02162at 2262.436 kb on - strandat 2262.837 kb on + strand, within MPMX19_02164at 2262.837 kb on + strand, within MPMX19_02164at 2262.838 kb on - strand, within MPMX19_02164at 2263.158 kb on + strand, within MPMX19_02164at 2263.158 kb on + strand, within MPMX19_02164at 2263.158 kb on + strand, within MPMX19_02164at 2263.158 kb on + strand, within MPMX19_02164at 2263.158 kb on + strand, within MPMX19_02164at 2263.158 kb on + strand, within MPMX19_02164at 2263.159 kb on - strand, within MPMX19_02164at 2263.159 kb on - strand, within MPMX19_02164at 2263.159 kb on - strand, within MPMX19_02164at 2263.159 kb on - strand, within MPMX19_02164at 2263.159 kb on - strand, within MPMX19_02164at 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.530 kb on + strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strandat 2263.531 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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2,261,579 + -0.4
2,261,579 + -1.7
2,261,579 + -0.8
2,261,579 + -2.9
2,261,579 + -1.3
2,261,579 + +1.3
2,261,579 + -1.2
2,261,580 - -0.8
2,261,580 - -0.5
2,261,580 - -1.2
2,261,580 - -1.4
2,261,580 - -0.6
2,261,581 + -0.8
2,261,581 + -0.3
2,261,581 + -0.3
2,261,581 + -2.6
2,261,581 + -0.2
2,261,581 + -1.3
2,261,581 + -2.3
2,261,581 + -1.1
2,261,581 + -1.2
2,261,581 + -1.9
2,261,581 + -0.8
2,261,581 + -0.8
2,261,582 - -0.5
2,261,582 - -0.3
2,261,582 - -0.4
2,261,582 - -0.4
2,261,582 - +0.2
2,261,582 - -0.5
2,261,582 - +1.2
2,261,582 - -0.5
2,261,582 - +0.5
2,261,582 - +0.7
2,261,582 - -0.3
2,261,582 - -0.5
2,261,592 + +0.7
2,261,592 + +1.3
2,261,592 + -0.8
2,261,592 + -1.5
2,261,592 + -1.5
2,261,592 + +0.6
2,261,592 + -2.0
2,261,592 + -1.1
2,261,592 + -0.7
2,261,592 + -2.3
2,261,592 + +0.3
2,261,593 - -0.3
2,261,593 - -1.3
2,261,593 - -1.7
2,261,593 - -2.0
2,261,593 - -1.5
2,261,593 - +0.6
2,261,593 - -1.4
2,261,593 - -0.1
2,261,593 - -0.5
2,261,593 - -0.8
2,261,593 - -0.9
2,261,593 - +1.1
2,261,593 - -0.5
2,261,593 - -1.3
2,261,593 - -0.2
2,261,596 + +0.2
2,261,596 + -1.1
2,261,596 + -1.9
2,261,596 + -0.8
2,261,596 + -2.0
2,261,596 + -2.2
2,261,596 + -1.8
2,261,596 + -0.1
2,261,596 + -0.1
2,261,596 + -2.4
2,261,597 - -1.0
2,261,667 + -0.4
2,261,667 + +0.0
2,261,668 - -0.1
2,261,668 - -1.2
2,261,823 + MPMX19_02162 0.23 +0.3
2,261,823 + MPMX19_02162 0.23 -0.5
2,261,823 + MPMX19_02162 0.23 -0.7
2,261,823 + MPMX19_02162 0.23 +0.6
2,261,823 + MPMX19_02162 0.23 -1.6
2,261,823 + MPMX19_02162 0.23 +0.1
2,261,823 + MPMX19_02162 0.23 -0.1
2,261,823 + MPMX19_02162 0.23 +1.2
2,261,823 + MPMX19_02162 0.23 +0.5
2,261,823 + MPMX19_02162 0.23 +1.5
2,261,823 + MPMX19_02162 0.23 -0.1
2,261,823 + MPMX19_02162 0.23 -0.6
2,261,823 + MPMX19_02162 0.23 -2.2
2,261,824 - MPMX19_02162 0.23 -1.2
2,261,824 - MPMX19_02162 0.23 -1.0
2,261,824 - MPMX19_02162 0.23 -0.4
2,261,824 - MPMX19_02162 0.23 -0.8
2,261,824 - MPMX19_02162 0.23 -1.1
2,261,824 - MPMX19_02162 0.23 -1.3
2,261,824 - MPMX19_02162 0.23 +0.2
2,261,824 - MPMX19_02162 0.23 -0.7
2,261,824 - MPMX19_02162 0.23 -0.8
2,261,824 - MPMX19_02162 0.23 -0.1
2,262,090 + MPMX19_02162 0.54 -1.1
2,262,090 + MPMX19_02162 0.54 +0.3
2,262,090 + MPMX19_02162 0.54 -2.6
2,262,090 + MPMX19_02162 0.54 +0.0
2,262,090 + MPMX19_02162 0.54 -1.6
2,262,091 - MPMX19_02162 0.54 -0.7
2,262,091 - MPMX19_02162 0.54 -0.8
2,262,091 - MPMX19_02162 0.54 +0.3
2,262,091 - MPMX19_02162 0.54 +0.2
2,262,091 - MPMX19_02162 0.54 -1.8
2,262,091 - MPMX19_02162 0.54 -1.4
2,262,091 - MPMX19_02162 0.54 -1.5
2,262,091 - MPMX19_02162 0.54 -1.8
2,262,091 - MPMX19_02162 0.54 +0.5
2,262,091 - MPMX19_02162 0.54 -0.8
2,262,091 - MPMX19_02162 0.54 -0.4
2,262,246 + MPMX19_02162 0.72 -0.8
2,262,246 + MPMX19_02162 0.72 +0.6
2,262,246 + MPMX19_02162 0.72 -1.1
2,262,246 + MPMX19_02162 0.72 -0.5
2,262,246 + MPMX19_02162 0.72 +0.2
2,262,246 + MPMX19_02162 0.72 -1.3
2,262,246 + MPMX19_02162 0.72 -0.1
2,262,246 + MPMX19_02162 0.72 -0.3
2,262,246 + MPMX19_02162 0.72 +1.2
2,262,246 + MPMX19_02162 0.72 -0.7
2,262,247 - MPMX19_02162 0.72 -0.7
2,262,247 - MPMX19_02162 0.72 -0.5
2,262,247 - MPMX19_02162 0.72 +0.5
2,262,247 - MPMX19_02162 0.72 +0.7
2,262,247 - MPMX19_02162 0.72 -1.5
2,262,247 - MPMX19_02162 0.72 -0.1
2,262,247 - MPMX19_02162 0.72 -0.3
2,262,247 - MPMX19_02162 0.72 -2.1
2,262,247 - MPMX19_02162 0.72 -1.1
2,262,247 - MPMX19_02162 0.72 -1.0
2,262,303 + MPMX19_02162 0.79 -0.1
2,262,303 + MPMX19_02162 0.79 -0.5
2,262,303 + MPMX19_02162 0.79 -0.9
2,262,303 + MPMX19_02162 0.79 -1.1
2,262,303 + MPMX19_02162 0.79 -1.8
2,262,303 + MPMX19_02162 0.79 -2.6
2,262,303 + MPMX19_02162 0.79 -0.9
2,262,303 + MPMX19_02162 0.79 -0.8
2,262,303 + MPMX19_02162 0.79 -0.3
2,262,303 + MPMX19_02162 0.79 -0.8
2,262,303 + MPMX19_02162 0.79 -1.1
2,262,303 + MPMX19_02162 0.79 -1.5
2,262,303 + MPMX19_02162 0.79 -0.4
2,262,303 + MPMX19_02162 0.79 -0.4
2,262,303 + MPMX19_02162 0.79 -0.4
2,262,303 + MPMX19_02162 0.79 -0.3
2,262,303 + MPMX19_02162 0.79 -0.2
2,262,303 + MPMX19_02162 0.79 -1.4
2,262,303 + MPMX19_02162 0.79 -0.3
2,262,303 + MPMX19_02162 0.79 -0.0
2,262,303 + MPMX19_02162 0.79 -1.4
2,262,303 + MPMX19_02162 0.79 +0.7
2,262,303 + MPMX19_02162 0.79 -0.3
2,262,303 + MPMX19_02162 0.79 -1.4
2,262,303 + MPMX19_02162 0.79 -1.1
2,262,303 + MPMX19_02162 0.79 -1.1
2,262,303 + MPMX19_02162 0.79 -1.2
2,262,303 + MPMX19_02162 0.79 -0.7
2,262,304 - MPMX19_02162 0.79 -1.1
2,262,304 - MPMX19_02162 0.79 -1.3
2,262,304 - MPMX19_02162 0.79 -0.5
2,262,304 - MPMX19_02162 0.79 -1.0
2,262,304 - MPMX19_02162 0.79 -1.4
2,262,304 - MPMX19_02162 0.79 -0.4
2,262,304 - MPMX19_02162 0.79 -0.3
2,262,304 - MPMX19_02162 0.79 -0.6
2,262,304 - MPMX19_02162 0.79 -0.9
2,262,304 - MPMX19_02162 0.79 +1.2
2,262,304 - MPMX19_02162 0.79 -2.6
2,262,304 - MPMX19_02162 0.79 -2.0
2,262,304 - MPMX19_02162 0.79 -1.0
2,262,304 - MPMX19_02162 0.79 +1.1
2,262,304 - MPMX19_02162 0.79 +0.7
2,262,304 - MPMX19_02162 0.79 -0.0
2,262,304 - MPMX19_02162 0.79 -0.8
2,262,304 - MPMX19_02162 0.79 +0.0
2,262,304 - MPMX19_02162 0.79 -2.4
2,262,304 - MPMX19_02162 0.79 -1.4
2,262,304 - MPMX19_02162 0.79 +1.3
2,262,304 - MPMX19_02162 0.79 -0.1
2,262,304 - MPMX19_02162 0.79 +0.3
2,262,304 - MPMX19_02162 0.79 -1.2
2,262,304 - MPMX19_02162 0.79 -0.3
2,262,304 - MPMX19_02162 0.79 -2.2
2,262,304 - MPMX19_02162 0.79 -1.4
2,262,304 - MPMX19_02162 0.79 +0.7
2,262,304 - MPMX19_02162 0.79 -1.5
2,262,339 + MPMX19_02162 0.83 -0.8
2,262,339 + MPMX19_02162 0.83 -0.8
2,262,339 + MPMX19_02162 0.83 -0.5
2,262,339 + MPMX19_02162 0.83 -1.9
2,262,339 + MPMX19_02162 0.83 -1.2
2,262,339 + MPMX19_02162 0.83 +0.0
2,262,339 + MPMX19_02162 0.83 -0.3
2,262,339 + MPMX19_02162 0.83 -1.0
2,262,340 - MPMX19_02162 0.83 -0.4
2,262,340 - MPMX19_02162 0.83 +0.5
2,262,340 - MPMX19_02162 0.83 -0.6
2,262,340 - MPMX19_02162 0.83 -0.3
2,262,340 - MPMX19_02162 0.83 +0.3
2,262,436 - -1.4
2,262,837 + MPMX19_02164 0.24 +0.8
2,262,837 + MPMX19_02164 0.24 -0.5
2,262,838 - MPMX19_02164 0.24 -0.7
2,263,158 + MPMX19_02164 0.58 -1.1
2,263,158 + MPMX19_02164 0.58 -0.7
2,263,158 + MPMX19_02164 0.58 +0.9
2,263,158 + MPMX19_02164 0.58 +1.2
2,263,158 + MPMX19_02164 0.58 +0.3
2,263,158 + MPMX19_02164 0.58 -0.1
2,263,159 - MPMX19_02164 0.58 -1.1
2,263,159 - MPMX19_02164 0.58 +1.1
2,263,159 - MPMX19_02164 0.58 -0.2
2,263,159 - MPMX19_02164 0.58 -1.6
2,263,159 - MPMX19_02164 0.58 -1.1
2,263,530 + -1.1
2,263,530 + -0.0
2,263,530 + -0.6
2,263,530 + -0.7
2,263,530 + -0.5
2,263,530 + -1.4
2,263,530 + +0.3
2,263,530 + +1.5
2,263,530 + -1.5
2,263,530 + -0.8
2,263,530 + -1.4
2,263,531 - +0.5
2,263,531 - -2.8
2,263,531 - -1.4
2,263,531 - -0.2
2,263,531 - -0.7
2,263,531 - +0.2
2,263,531 - +0.2
2,263,531 - -0.3
2,263,531 - -0.1
2,263,531 - +0.2
2,263,531 - -1.8
2,263,531 - -0.8

Or see this region's nucleotide sequence