Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01234 and MPMX19_01235 are separated by 91 nucleotides MPMX19_01235 and MPMX19_01236 are separated by 87 nucleotides
MPMX19_01234: MPMX19_01234 - Multidrug resistance protein MdtA, at 1,282,840 to 1,284,486
_01234
MPMX19_01235: MPMX19_01235 - hypothetical protein, at 1,284,578 to 1,285,048
_01235
MPMX19_01236: MPMX19_01236 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 1,285,136 to 1,285,963
_01236
Position (kb)
1284
1285
1286 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1284.254 kb on + strand, within MPMX19_01234 at 1284.254 kb on + strand, within MPMX19_01234 at 1284.255 kb on - strand, within MPMX19_01234 at 1284.255 kb on - strand, within MPMX19_01234 at 1284.255 kb on - strand, within MPMX19_01234 at 1284.255 kb on - strand, within MPMX19_01234 at 1284.375 kb on - strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.410 kb on + strand at 1284.411 kb on - strand at 1284.411 kb on - strand at 1284.411 kb on - strand at 1284.411 kb on - strand at 1284.411 kb on - strand at 1284.411 kb on - strand at 1284.411 kb on - strand at 1284.411 kb on - strand at 1284.411 kb on - strand at 1284.535 kb on - strand at 1284.580 kb on - strand at 1284.819 kb on + strand, within MPMX19_01235 at 1284.819 kb on + strand, within MPMX19_01235 at 1284.819 kb on + strand, within MPMX19_01235 at 1284.820 kb on - strand, within MPMX19_01235 at 1284.820 kb on - strand, within MPMX19_01235 at 1284.820 kb on - strand, within MPMX19_01235 at 1284.820 kb on - strand, within MPMX19_01235 at 1285.127 kb on + strand at 1285.127 kb on + strand at 1285.127 kb on + strand at 1285.128 kb on - strand at 1285.128 kb on - strand at 1285.128 kb on - strand at 1285.128 kb on - strand at 1285.128 kb on - strand at 1285.128 kb on - strand at 1285.128 kb on - strand at 1285.128 kb on - strand at 1285.128 kb on - strand at 1285.128 kb on - strand at 1285.138 kb on - strand at 1285.138 kb on - strand at 1285.138 kb on - strand at 1285.138 kb on - strand at 1285.138 kb on - strand at 1285.138 kb on - strand at 1285.138 kb on - strand at 1285.138 kb on - strand at 1285.138 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,284,254 + MPMX19_01234 0.86 +0.1 1,284,254 + MPMX19_01234 0.86 -0.9 1,284,255 - MPMX19_01234 0.86 +0.2 1,284,255 - MPMX19_01234 0.86 -0.8 1,284,255 - MPMX19_01234 0.86 -1.7 1,284,255 - MPMX19_01234 0.86 -0.4 1,284,375 - -1.6 1,284,410 + -1.0 1,284,410 + -1.9 1,284,410 + -0.2 1,284,410 + +0.1 1,284,410 + -1.4 1,284,410 + +1.4 1,284,410 + -0.6 1,284,410 + -2.7 1,284,410 + -0.4 1,284,410 + -0.2 1,284,410 + -0.5 1,284,410 + -1.9 1,284,410 + +0.0 1,284,410 + -1.9 1,284,410 + +0.3 1,284,411 - -0.2 1,284,411 - -0.6 1,284,411 - -0.8 1,284,411 - -0.4 1,284,411 - -1.6 1,284,411 - -0.4 1,284,411 - -1.0 1,284,411 - +0.3 1,284,411 - -1.9 1,284,535 - -0.4 1,284,580 - -1.9 1,284,819 + MPMX19_01235 0.51 -1.4 1,284,819 + MPMX19_01235 0.51 -1.8 1,284,819 + MPMX19_01235 0.51 -0.9 1,284,820 - MPMX19_01235 0.51 -0.2 1,284,820 - MPMX19_01235 0.51 -1.0 1,284,820 - MPMX19_01235 0.51 -0.2 1,284,820 - MPMX19_01235 0.51 +0.1 1,285,127 + -1.5 1,285,127 + -0.6 1,285,127 + +0.1 1,285,128 - +2.4 1,285,128 - -0.8 1,285,128 - -3.0 1,285,128 - -1.9 1,285,128 - -2.6 1,285,128 - -0.6 1,285,128 - +1.0 1,285,128 - -0.9 1,285,128 - -0.9 1,285,128 - -0.2 1,285,138 - -0.0 1,285,138 - -0.3 1,285,138 - -1.9 1,285,138 - -1.1 1,285,138 - -2.0 1,285,138 - -0.8 1,285,138 - -2.2 1,285,138 - -0.2 1,285,138 - -0.9
Or see this region's nucleotide sequence