Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00894 and MPMX19_00895 are separated by 243 nucleotides MPMX19_00895 and MPMX19_00896 are separated by 117 nucleotides MPMX19_00896 and MPMX19_00897 are separated by 22 nucleotides MPMX19_00897 and MPMX19_00898 are separated by 103 nucleotides
MPMX19_00894: MPMX19_00894 - Peptidyl-prolyl cis-trans isomerase D, at 928,812 to 930,692
_00894
MPMX19_00895: MPMX19_00895 - hypothetical protein, at 930,936 to 931,115
_00895
MPMX19_00896: MPMX19_00896 - hypothetical protein, at 931,233 to 931,571
_00896
MPMX19_00897: MPMX19_00897 - hypothetical protein, at 931,594 to 931,812
_00897
MPMX19_00898: MPMX19_00898 - hypothetical protein, at 931,916 to 932,338
_00898
Position (kb) 930
931
932 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 930.148 kb on + strand, within MPMX19_00894 at 930.244 kb on + strand, within MPMX19_00894 at 930.245 kb on - strand, within MPMX19_00894 at 930.594 kb on + strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.705 kb on + strand at 930.706 kb on - strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.750 kb on - strand at 930.750 kb on - strand at 930.890 kb on - strand at 930.890 kb on - strand at 930.937 kb on + strand at 930.937 kb on + strand at 930.937 kb on + strand at 930.938 kb on - strand at 930.938 kb on - strand at 931.140 kb on + strand at 931.140 kb on + strand at 931.141 kb on - strand at 931.141 kb on - strand at 931.141 kb on - strand at 931.141 kb on - strand at 931.178 kb on + strand at 931.178 kb on + strand at 931.178 kb on + strand at 931.179 kb on - strand at 931.179 kb on - strand at 931.184 kb on + strand at 931.184 kb on + strand at 931.184 kb on + strand at 931.184 kb on + strand at 931.184 kb on + strand at 931.185 kb on - strand at 931.185 kb on - strand at 931.185 kb on - strand at 931.185 kb on - strand at 931.487 kb on + strand, within MPMX19_00896 at 931.487 kb on + strand, within MPMX19_00896 at 931.801 kb on + strand at 931.801 kb on + strand at 931.801 kb on + strand at 931.801 kb on + strand at 931.801 kb on + strand at 931.802 kb on - strand at 931.802 kb on - strand at 931.802 kb on - strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.816 kb on - strand at 931.816 kb on - strand at 931.816 kb on - strand at 931.816 kb on - strand at 931.837 kb on + strand at 931.838 kb on - strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.874 kb on - strand at 931.874 kb on - strand at 931.874 kb on - strand at 931.876 kb on + strand at 931.876 kb on + strand at 931.879 kb on + strand at 931.879 kb on + strand at 931.880 kb on - strand at 931.880 kb on - strand at 931.929 kb on + strand at 931.929 kb on + strand at 931.929 kb on + strand at 931.929 kb on + strand at 931.930 kb on - strand at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.085 kb on + strand, within MPMX19_00898 at 932.085 kb on + strand, within MPMX19_00898 at 932.085 kb on + strand, within MPMX19_00898
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 930,148 + MPMX19_00894 0.71 -0.5 930,244 + MPMX19_00894 0.76 -1.4 930,245 - MPMX19_00894 0.76 +0.3 930,594 + -1.2 930,595 - -0.8 930,595 - -1.2 930,595 - +0.5 930,595 - -0.8 930,595 - -1.0 930,595 - +0.2 930,705 + +0.3 930,706 - +0.2 930,745 + -1.3 930,745 + +0.8 930,745 + -0.4 930,745 + -0.5 930,745 + -0.5 930,745 + -0.1 930,745 + -1.5 930,745 + -1.5 930,745 + -1.3 930,745 + -0.5 930,745 + -0.1 930,745 + -0.3 930,746 - +0.5 930,746 - +0.5 930,746 - -0.2 930,746 - -0.8 930,746 - -2.2 930,746 - +1.7 930,746 - -0.1 930,746 - -1.0 930,746 - +0.2 930,746 - -0.2 930,746 - +0.9 930,746 - +0.2 930,746 - -0.4 930,746 - -1.1 930,746 - -1.4 930,746 - -1.8 930,746 - +0.5 930,746 - -0.7 930,746 - +0.0 930,746 - +0.2 930,746 - -0.8 930,746 - +1.5 930,746 - -0.8 930,746 - -1.2 930,746 - -0.7 930,746 - +0.4 930,746 - -1.2 930,746 - -1.1 930,746 - -1.9 930,746 - +1.5 930,746 - -1.5 930,746 - -0.3 930,746 - -2.0 930,746 - +0.0 930,746 - +1.2 930,750 - -0.2 930,750 - -0.3 930,890 - +1.2 930,890 - +0.9 930,937 + -0.3 930,937 + -0.9 930,937 + -0.0 930,938 - -2.0 930,938 - -0.9 931,140 + -1.2 931,140 + +0.0 931,141 - -1.6 931,141 - -0.6 931,141 - -0.2 931,141 - -1.0 931,178 + -0.5 931,178 + +0.3 931,178 + -0.1 931,179 - -0.5 931,179 - -1.8 931,184 + -0.4 931,184 + +0.7 931,184 + -0.5 931,184 + -1.3 931,184 + -0.1 931,185 - -0.6 931,185 - +0.2 931,185 - -0.2 931,185 - -0.6 931,487 + MPMX19_00896 0.75 +0.9 931,487 + MPMX19_00896 0.75 +0.5 931,801 + -1.8 931,801 + -0.8 931,801 + -0.7 931,801 + -2.3 931,801 + +1.3 931,802 - +0.3 931,802 - -0.4 931,802 - -1.1 931,812 + +0.3 931,812 + +0.5 931,812 + +0.2 931,812 + -1.0 931,812 + -0.8 931,812 + -1.3 931,812 + -0.4 931,812 + -1.1 931,812 + -0.7 931,812 + +0.2 931,812 + +0.3 931,812 + -0.1 931,812 + -0.9 931,812 + -0.3 931,812 + -2.5 931,812 + +1.2 931,812 + -0.8 931,812 + -1.4 931,812 + -0.2 931,812 + +0.3 931,812 + -0.7 931,812 + +0.4 931,812 + +1.2 931,812 + -0.3 931,812 + -0.1 931,812 + -0.2 931,812 + -0.7 931,812 + -0.3 931,812 + +0.2 931,812 + -1.2 931,812 + +2.0 931,812 + -1.2 931,812 + -0.8 931,812 + -1.5 931,812 + -0.1 931,812 + -1.1 931,812 + -0.7 931,812 + -0.1 931,812 + -1.8 931,812 + -2.0 931,812 + +0.9 931,812 + -0.1 931,812 + -0.7 931,812 + -0.1 931,813 - +0.9 931,813 - +0.0 931,813 - -2.8 931,813 - -0.1 931,813 - +1.2 931,813 - +0.8 931,813 - +0.0 931,813 - -0.3 931,813 - +0.2 931,813 - -1.8 931,813 - +0.4 931,813 - -0.3 931,813 - +0.2 931,813 - +0.0 931,813 - -1.7 931,813 - -0.1 931,813 - +0.9 931,813 - +1.2 931,813 - +1.3 931,813 - -0.8 931,813 - -0.3 931,813 - -0.5 931,813 - -0.5 931,813 - +3.1 931,813 - -1.0 931,813 - -0.3 931,813 - +0.4 931,813 - +2.5 931,813 - -1.8 931,813 - -0.8 931,813 - -1.6 931,813 - -1.7 931,813 - +0.9 931,815 + +2.9 931,815 + -0.1 931,815 + -1.0 931,815 + +0.2 931,815 + -0.8 931,815 + +0.2 931,815 + -1.8 931,815 + -0.1 931,816 - -1.0 931,816 - +0.2 931,816 - -0.4 931,816 - -0.3 931,837 + -1.4 931,838 - -0.5 931,873 + +0.5 931,873 + +2.1 931,873 + +1.3 931,873 + -0.6 931,873 + -0.2 931,873 + -0.8 931,874 - -0.3 931,874 - -1.2 931,874 - -0.7 931,876 + -0.0 931,876 + +0.9 931,879 + +0.4 931,879 + -0.5 931,880 - -0.8 931,880 - -0.1 931,929 + +0.5 931,929 + +0.5 931,929 + -1.8 931,929 + +0.9 931,930 - +0.3 932,030 + MPMX19_00898 0.27 -0.6 932,030 + MPMX19_00898 0.27 +0.5 932,030 + MPMX19_00898 0.27 -0.1 932,030 + MPMX19_00898 0.27 -0.3 932,030 + MPMX19_00898 0.27 -0.1 932,030 + MPMX19_00898 0.27 -1.0 932,030 + MPMX19_00898 0.27 -1.0 932,030 + MPMX19_00898 0.27 -0.9 932,031 - MPMX19_00898 0.27 -0.3 932,031 - MPMX19_00898 0.27 -0.7 932,031 - MPMX19_00898 0.27 +0.0 932,031 - MPMX19_00898 0.27 +0.2 932,031 - MPMX19_00898 0.27 -1.1 932,031 - MPMX19_00898 0.27 +0.3 932,031 - MPMX19_00898 0.27 -0.8 932,085 + MPMX19_00898 0.40 -0.5 932,085 + MPMX19_00898 0.40 -0.1 932,085 + MPMX19_00898 0.40 -1.8
Or see this region's nucleotide sequence