Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00734 and MPMX19_00735 overlap by 4 nucleotides MPMX19_00735 and MPMX19_00736 are separated by 78 nucleotides MPMX19_00736 and MPMX19_00737 are separated by 26 nucleotides MPMX19_00737 and MPMX19_00738 are separated by 132 nucleotides
MPMX19_00734: MPMX19_00734 - Riboflavin biosynthesis protein RibBA, at 755,554 to 756,693
_00734
MPMX19_00735: MPMX19_00735 - Riboflavin synthase, at 756,690 to 757,277
_00735
MPMX19_00736: MPMX19_00736 - Riboflavin biosynthesis protein RibD, at 757,356 to 758,498
_00736
MPMX19_00737: MPMX19_00737 - Outer membrane protein assembly factor BamE, at 758,525 to 759,019
_00737
MPMX19_00738: MPMX19_00738 - hypothetical protein, at 759,152 to 759,745
_00738
Position (kb) 757
758
759 Strain fitness (log2 ratio) -2
-1
0
1
2 at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 757.290 kb on - strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.358 kb on - strand at 757.358 kb on - strand at 757.358 kb on - strand at 757.358 kb on - strand at 757.358 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.166 kb on + strand at 759.166 kb on + strand at 759.167 kb on - strand at 759.167 kb on - strand at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.425 kb on + strand, within MPMX19_00738 at 759.425 kb on + strand, within MPMX19_00738 at 759.425 kb on + strand, within MPMX19_00738 at 759.426 kb on - strand, within MPMX19_00738 at 759.426 kb on - strand, within MPMX19_00738
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 756,671 + -1.8 756,671 + -0.3 756,671 + -0.5 756,671 + -0.3 756,671 + -1.7 756,671 + +0.3 756,671 + -1.2 756,671 + -1.6 756,671 + -0.3 756,671 + -0.9 756,671 + +0.5 756,671 + -0.9 756,671 + -0.3 756,671 + -1.4 756,671 + +0.7 756,672 - -1.7 756,672 - -0.8 756,672 - -1.7 756,672 - -1.3 756,672 - -0.8 756,672 - -0.5 756,672 - -1.1 756,672 - -0.8 756,672 - -1.5 756,672 - +0.7 756,672 - -1.2 756,672 - -1.7 756,672 - +0.3 757,290 - -0.3 757,357 + -1.3 757,357 + +1.2 757,357 + -1.4 757,357 + -1.2 757,357 + -0.3 757,357 + -1.4 757,357 + -1.2 757,357 + -1.2 757,357 + -1.3 757,357 + +0.0 757,358 - +0.3 757,358 - -1.2 757,358 - +0.6 757,358 - -0.5 757,358 - -0.5 759,032 - -0.2 759,032 - -1.5 759,032 - -0.7 759,032 - +0.2 759,032 - -1.3 759,032 - -2.0 759,032 - -0.6 759,032 - -2.0 759,166 + -1.7 759,166 + -0.8 759,167 - +0.2 759,167 - -1.4 759,299 + MPMX19_00738 0.25 +0.5 759,299 + MPMX19_00738 0.25 +0.0 759,299 + MPMX19_00738 0.25 -0.0 759,299 + MPMX19_00738 0.25 -2.3 759,299 + MPMX19_00738 0.25 -1.9 759,299 + MPMX19_00738 0.25 -0.7 759,299 + MPMX19_00738 0.25 +1.2 759,299 + MPMX19_00738 0.25 -2.0 759,299 + MPMX19_00738 0.25 -0.0 759,299 + MPMX19_00738 0.25 +2.1 759,299 + MPMX19_00738 0.25 -0.2 759,300 - MPMX19_00738 0.25 -0.6 759,300 - MPMX19_00738 0.25 -1.3 759,300 - MPMX19_00738 0.25 -0.2 759,300 - MPMX19_00738 0.25 +0.2 759,300 - MPMX19_00738 0.25 -1.8 759,300 - MPMX19_00738 0.25 -2.1 759,300 - MPMX19_00738 0.25 -0.5 759,425 + MPMX19_00738 0.46 +0.4 759,425 + MPMX19_00738 0.46 -1.2 759,425 + MPMX19_00738 0.46 -2.6 759,426 - MPMX19_00738 0.46 +0.4 759,426 - MPMX19_00738 0.46 +0.4
Or see this region's nucleotide sequence