Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00056 and MPMX19_00057 are separated by 52 nucleotides MPMX19_00057 and MPMX19_00058 are separated by 18 nucleotides MPMX19_00058 and MPMX19_00059 are separated by 49 nucleotides MPMX19_00059 and MPMX19_00060 are separated by 79 nucleotides
MPMX19_00056: MPMX19_00056 - Leucine--tRNA ligase, at 58,758 to 61,322
_00056
MPMX19_00057: MPMX19_00057 - hypothetical protein, at 61,375 to 61,881
_00057
MPMX19_00058: MPMX19_00058 - hypothetical protein, at 61,900 to 62,925
_00058
MPMX19_00059: MPMX19_00059 - hypothetical protein, at 62,975 to 63,505
_00059
MPMX19_00060: MPMX19_00060 - hypothetical protein, at 63,585 to 63,932
_00060
Position (kb) 61
62
63 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 62.962 kb on + strand at 62.962 kb on + strand at 62.963 kb on - strand at 62.963 kb on - strand at 62.963 kb on - strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.287 kb on + strand, within MPMX19_00059 at 63.287 kb on + strand, within MPMX19_00059 at 63.287 kb on + strand, within MPMX19_00059 at 63.287 kb on + strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.506 kb on + strand at 63.514 kb on + strand at 63.562 kb on + strand at 63.562 kb on + strand at 63.562 kb on + strand at 63.562 kb on + strand at 63.563 kb on - strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.585 kb on - strand at 63.585 kb on - strand at 63.585 kb on - strand at 63.585 kb on - strand at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.694 kb on + strand, within MPMX19_00060 at 63.694 kb on + strand, within MPMX19_00060 at 63.695 kb on - strand, within MPMX19_00060
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 62,962 + -0.2 62,962 + -1.2 62,963 - -0.6 62,963 - +0.4 62,963 - -0.4 62,990 + -0.4 62,990 + -2.6 62,990 + -1.0 62,990 + -0.8 62,990 + -0.2 62,990 + -2.2 62,990 + -1.5 62,990 + +0.8 62,990 + -0.5 62,990 + +0.4 62,990 + +0.2 62,990 + -0.0 62,990 + -0.2 62,990 + +0.7 62,990 + +1.2 62,990 + -1.0 62,990 + -0.8 62,991 - +0.6 62,991 - +0.7 62,991 - -0.6 62,991 - -1.0 62,991 - -0.1 62,991 - -0.8 62,991 - -0.7 62,991 - -0.8 62,991 - -2.0 62,991 - +0.6 62,991 - -1.0 63,266 + MPMX19_00059 0.55 +0.2 63,266 + MPMX19_00059 0.55 -0.2 63,266 + MPMX19_00059 0.55 -1.4 63,266 + MPMX19_00059 0.55 +0.4 63,266 + MPMX19_00059 0.55 -0.8 63,266 + MPMX19_00059 0.55 +0.1 63,266 + MPMX19_00059 0.55 -0.6 63,266 + MPMX19_00059 0.55 -0.6 63,266 + MPMX19_00059 0.55 -2.0 63,266 + MPMX19_00059 0.55 -0.2 63,266 + MPMX19_00059 0.55 +0.2 63,266 + MPMX19_00059 0.55 +1.2 63,266 + MPMX19_00059 0.55 -0.0 63,266 + MPMX19_00059 0.55 +0.9 63,266 + MPMX19_00059 0.55 -0.2 63,266 + MPMX19_00059 0.55 -0.4 63,266 + MPMX19_00059 0.55 -0.3 63,266 + MPMX19_00059 0.55 -1.2 63,266 + MPMX19_00059 0.55 -0.8 63,266 + MPMX19_00059 0.55 -1.6 63,266 + MPMX19_00059 0.55 -1.3 63,267 - MPMX19_00059 0.55 -0.3 63,267 - MPMX19_00059 0.55 -1.0 63,267 - MPMX19_00059 0.55 -0.8 63,267 - MPMX19_00059 0.55 -0.8 63,267 - MPMX19_00059 0.55 -0.8 63,267 - MPMX19_00059 0.55 +0.8 63,267 - MPMX19_00059 0.55 -1.1 63,267 - MPMX19_00059 0.55 -2.5 63,267 - MPMX19_00059 0.55 -1.4 63,267 - MPMX19_00059 0.55 -1.7 63,267 - MPMX19_00059 0.55 -0.2 63,267 - MPMX19_00059 0.55 -0.6 63,267 - MPMX19_00059 0.55 -1.3 63,267 - MPMX19_00059 0.55 +1.1 63,267 - MPMX19_00059 0.55 +0.2 63,267 - MPMX19_00059 0.55 -1.2 63,267 - MPMX19_00059 0.55 -0.2 63,267 - MPMX19_00059 0.55 +0.1 63,267 - MPMX19_00059 0.55 -1.0 63,287 + MPMX19_00059 0.59 +0.2 63,287 + MPMX19_00059 0.59 -0.6 63,287 + MPMX19_00059 0.59 +1.1 63,287 + MPMX19_00059 0.59 -1.6 63,288 - MPMX19_00059 0.59 -1.8 63,288 - MPMX19_00059 0.59 -1.0 63,288 - MPMX19_00059 0.59 +0.6 63,288 - MPMX19_00059 0.59 -1.2 63,288 - MPMX19_00059 0.59 +0.1 63,288 - MPMX19_00059 0.59 -0.9 63,288 - MPMX19_00059 0.59 -0.3 63,506 + +0.2 63,514 + -0.4 63,562 + -0.8 63,562 + -0.9 63,562 + -1.2 63,562 + -0.8 63,563 - +0.6 63,584 + -0.0 63,584 + -1.6 63,584 + -3.2 63,584 + -1.3 63,584 + -1.3 63,584 + -1.2 63,584 + +0.7 63,584 + -0.4 63,584 + -0.6 63,585 - -1.0 63,585 - -0.7 63,585 - +0.3 63,585 - -0.2 63,633 + MPMX19_00060 0.14 -0.2 63,633 + MPMX19_00060 0.14 +0.2 63,633 + MPMX19_00060 0.14 -0.3 63,633 + MPMX19_00060 0.14 -0.6 63,633 + MPMX19_00060 0.14 -0.7 63,633 + MPMX19_00060 0.14 -1.0 63,633 + MPMX19_00060 0.14 -0.4 63,633 + MPMX19_00060 0.14 -2.2 63,633 + MPMX19_00060 0.14 +0.3 63,634 - MPMX19_00060 0.14 -0.8 63,634 - MPMX19_00060 0.14 -0.9 63,634 - MPMX19_00060 0.14 -1.0 63,634 - MPMX19_00060 0.14 -0.6 63,634 - MPMX19_00060 0.14 -1.2 63,634 - MPMX19_00060 0.14 +0.2 63,634 - MPMX19_00060 0.14 -0.2 63,634 - MPMX19_00060 0.14 -0.4 63,634 - MPMX19_00060 0.14 -0.0 63,634 - MPMX19_00060 0.14 -1.4 63,694 + MPMX19_00060 0.31 -0.0 63,694 + MPMX19_00060 0.31 -0.6 63,695 - MPMX19_00060 0.32 -0.8
Or see this region's nucleotide sequence