Experiment: Bas69
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mdtG and msyB are separated by 82 nucleotides msyB and yceK are separated by 0 nucleotides yceK and mdoH are separated by 172 nucleotides mdoH and mdoG are separated by 22 nucleotides
NOLOHH_21305: mdtG - multidrug efflux MFS transporter MdtG, at 4,188,563 to 4,189,789
mdtG
NOLOHH_21310: msyB - MysB family protein, at 4,189,872 to 4,190,246
msyB
NOLOHH_21315: yceK - YceK/YidQ family lipoprotein, at 4,190,247 to 4,190,474
yceK
NOLOHH_21325: mdoH - glucans biosynthesis glucosyltransferase MdoH, at 4,190,647 to 4,193,160
mdoH
NOLOHH_21330: mdoG - glucans biosynthesis protein MdoG, at 4,193,183 to 4,194,685
mdoG
Position (kb) 4190
4191
4192
4193
4194 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4190.109 kb on + strand, within msyB at 4190.119 kb on + strand, within msyB at 4190.119 kb on + strand, within msyB at 4190.150 kb on + strand, within msyB at 4190.155 kb on + strand, within msyB at 4190.374 kb on + strand, within yceK at 4190.405 kb on + strand, within yceK at 4190.417 kb on + strand, within yceK at 4190.417 kb on + strand, within yceK at 4190.417 kb on + strand, within yceK at 4190.641 kb on - strand at 4190.709 kb on - strand at 4190.950 kb on - strand, within mdoH at 4191.549 kb on - strand, within mdoH at 4191.572 kb on - strand, within mdoH at 4191.572 kb on - strand, within mdoH at 4191.572 kb on - strand, within mdoH at 4191.607 kb on - strand, within mdoH at 4191.630 kb on - strand, within mdoH at 4192.170 kb on - strand, within mdoH at 4192.170 kb on - strand, within mdoH at 4192.285 kb on - strand, within mdoH at 4192.332 kb on - strand, within mdoH at 4192.332 kb on - strand, within mdoH at 4192.332 kb on - strand, within mdoH at 4192.350 kb on - strand, within mdoH at 4192.444 kb on - strand, within mdoH at 4192.444 kb on - strand, within mdoH at 4192.508 kb on - strand, within mdoH at 4192.508 kb on - strand, within mdoH at 4192.510 kb on - strand, within mdoH at 4192.510 kb on - strand, within mdoH at 4192.519 kb on - strand, within mdoH at 4192.627 kb on - strand, within mdoH at 4192.627 kb on - strand, within mdoH at 4192.627 kb on - strand, within mdoH at 4192.627 kb on - strand, within mdoH at 4192.627 kb on - strand, within mdoH at 4192.629 kb on - strand, within mdoH at 4192.629 kb on - strand, within mdoH at 4192.726 kb on - strand, within mdoH at 4192.726 kb on - strand, within mdoH at 4192.726 kb on - strand, within mdoH at 4192.727 kb on + strand, within mdoH at 4192.727 kb on + strand, within mdoH at 4192.728 kb on - strand, within mdoH at 4192.988 kb on - strand at 4192.988 kb on - strand at 4192.988 kb on - strand at 4192.988 kb on - strand at 4193.172 kb on - strand at 4193.172 kb on - strand at 4193.199 kb on - strand at 4193.329 kb on - strand at 4193.349 kb on - strand, within mdoG at 4193.450 kb on - strand, within mdoG at 4193.572 kb on - strand, within mdoG at 4193.623 kb on - strand, within mdoG at 4193.920 kb on - strand, within mdoG at 4193.923 kb on + strand, within mdoG at 4193.963 kb on - strand, within mdoG at 4194.053 kb on - strand, within mdoG at 4194.057 kb on - strand, within mdoG
Per-strain Table
Position Strand Gene LocusTag Fraction Bas69 remove 4,190,109 + msyB NOLOHH_21310 0.63 +0.9 4,190,119 + msyB NOLOHH_21310 0.66 +0.5 4,190,119 + msyB NOLOHH_21310 0.66 +2.0 4,190,150 + msyB NOLOHH_21310 0.74 -2.1 4,190,155 + msyB NOLOHH_21310 0.75 +0.1 4,190,374 + yceK NOLOHH_21315 0.56 -0.1 4,190,405 + yceK NOLOHH_21315 0.69 -0.1 4,190,417 + yceK NOLOHH_21315 0.75 -1.4 4,190,417 + yceK NOLOHH_21315 0.75 +1.4 4,190,417 + yceK NOLOHH_21315 0.75 +0.9 4,190,641 - +0.1 4,190,709 - -1.7 4,190,950 - mdoH NOLOHH_21325 0.12 +0.3 4,191,549 - mdoH NOLOHH_21325 0.36 -1.4 4,191,572 - mdoH NOLOHH_21325 0.37 -0.7 4,191,572 - mdoH NOLOHH_21325 0.37 -1.7 4,191,572 - mdoH NOLOHH_21325 0.37 -0.4 4,191,607 - mdoH NOLOHH_21325 0.38 -0.1 4,191,630 - mdoH NOLOHH_21325 0.39 -1.9 4,192,170 - mdoH NOLOHH_21325 0.61 -1.4 4,192,170 - mdoH NOLOHH_21325 0.61 -2.7 4,192,285 - mdoH NOLOHH_21325 0.65 -2.1 4,192,332 - mdoH NOLOHH_21325 0.67 -1.1 4,192,332 - mdoH NOLOHH_21325 0.67 -1.4 4,192,332 - mdoH NOLOHH_21325 0.67 -1.4 4,192,350 - mdoH NOLOHH_21325 0.68 -2.6 4,192,444 - mdoH NOLOHH_21325 0.71 -0.1 4,192,444 - mdoH NOLOHH_21325 0.71 -2.4 4,192,508 - mdoH NOLOHH_21325 0.74 -1.1 4,192,508 - mdoH NOLOHH_21325 0.74 -1.1 4,192,510 - mdoH NOLOHH_21325 0.74 -1.1 4,192,510 - mdoH NOLOHH_21325 0.74 -3.3 4,192,519 - mdoH NOLOHH_21325 0.74 -2.3 4,192,627 - mdoH NOLOHH_21325 0.79 +0.9 4,192,627 - mdoH NOLOHH_21325 0.79 -1.9 4,192,627 - mdoH NOLOHH_21325 0.79 -2.4 4,192,627 - mdoH NOLOHH_21325 0.79 -1.4 4,192,627 - mdoH NOLOHH_21325 0.79 -2.3 4,192,629 - mdoH NOLOHH_21325 0.79 -1.1 4,192,629 - mdoH NOLOHH_21325 0.79 -1.4 4,192,726 - mdoH NOLOHH_21325 0.83 -1.7 4,192,726 - mdoH NOLOHH_21325 0.83 -1.1 4,192,726 - mdoH NOLOHH_21325 0.83 -1.9 4,192,727 + mdoH NOLOHH_21325 0.83 -1.9 4,192,727 + mdoH NOLOHH_21325 0.83 -1.4 4,192,728 - mdoH NOLOHH_21325 0.83 -2.3 4,192,988 - -1.1 4,192,988 - -1.7 4,192,988 - -2.3 4,192,988 - -1.1 4,193,172 - -1.7 4,193,172 - -0.1 4,193,199 - -0.7 4,193,329 - -0.7 4,193,349 - mdoG NOLOHH_21330 0.11 -2.0 4,193,450 - mdoG NOLOHH_21330 0.18 -2.4 4,193,572 - mdoG NOLOHH_21330 0.26 -1.1 4,193,623 - mdoG NOLOHH_21330 0.29 -0.1 4,193,920 - mdoG NOLOHH_21330 0.49 +0.9 4,193,923 + mdoG NOLOHH_21330 0.49 -0.1 4,193,963 - mdoG NOLOHH_21330 0.52 -1.7 4,194,053 - mdoG NOLOHH_21330 0.58 -2.3 4,194,057 - mdoG NOLOHH_21330 0.58 -1.7
Or see this region's nucleotide sequence