Experiment: Bas69
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt flgH and flgG are separated by 52 nucleotides flgG and flgF are separated by 137 nucleotides flgF and flgE are separated by 19 nucleotides
NOLOHH_21175: flgH - flagellar basal body L-ring protein FlgH, at 4,167,825 to 4,168,523
flgH
NOLOHH_21180: flgG - flagellar basal-body rod protein FlgG, at 4,168,576 to 4,169,358
flgG
NOLOHH_21185: flgF - flagellar basal-body rod protein FlgF, at 4,169,496 to 4,170,251
flgF
NOLOHH_21190: flgE - flagellar hook protein FlgE, at 4,170,271 to 4,171,476
flgE
Position (kb) 4169
4170
4171 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4168.502 kb on + strand at 4168.502 kb on + strand at 4168.503 kb on - strand at 4168.626 kb on + strand at 4168.663 kb on - strand, within flgG at 4168.693 kb on - strand, within flgG at 4168.706 kb on + strand, within flgG at 4168.706 kb on + strand, within flgG at 4168.914 kb on + strand, within flgG at 4169.119 kb on + strand, within flgG at 4169.161 kb on + strand, within flgG at 4169.268 kb on + strand, within flgG at 4169.358 kb on + strand at 4169.378 kb on + strand at 4169.793 kb on - strand, within flgF at 4169.793 kb on - strand, within flgF at 4170.236 kb on - strand at 4170.338 kb on + strand at 4170.536 kb on - strand, within flgE at 4170.573 kb on - strand, within flgE at 4170.573 kb on - strand, within flgE at 4170.609 kb on - strand, within flgE at 4170.657 kb on + strand, within flgE at 4170.658 kb on - strand, within flgE at 4170.816 kb on + strand, within flgE at 4170.845 kb on + strand, within flgE at 4170.858 kb on + strand, within flgE at 4170.858 kb on + strand, within flgE at 4170.858 kb on + strand, within flgE at 4170.859 kb on - strand, within flgE at 4170.944 kb on + strand, within flgE at 4170.944 kb on + strand, within flgE at 4170.981 kb on + strand, within flgE at 4171.176 kb on + strand, within flgE
Per-strain Table
Position Strand Gene LocusTag Fraction Bas69 remove 4,168,502 + -2.4 4,168,502 + +0.9 4,168,503 - -0.1 4,168,626 + -0.7 4,168,663 - flgG NOLOHH_21180 0.11 -1.4 4,168,693 - flgG NOLOHH_21180 0.15 -1.9 4,168,706 + flgG NOLOHH_21180 0.17 -2.3 4,168,706 + flgG NOLOHH_21180 0.17 -1.1 4,168,914 + flgG NOLOHH_21180 0.43 +0.9 4,169,119 + flgG NOLOHH_21180 0.69 -2.0 4,169,161 + flgG NOLOHH_21180 0.75 -1.1 4,169,268 + flgG NOLOHH_21180 0.88 +0.9 4,169,358 + -0.7 4,169,378 + -1.7 4,169,793 - flgF NOLOHH_21185 0.39 -0.1 4,169,793 - flgF NOLOHH_21185 0.39 -3.1 4,170,236 - -2.1 4,170,338 + -0.1 4,170,536 - flgE NOLOHH_21190 0.22 +0.9 4,170,573 - flgE NOLOHH_21190 0.25 -0.1 4,170,573 - flgE NOLOHH_21190 0.25 -1.1 4,170,609 - flgE NOLOHH_21190 0.28 -0.7 4,170,657 + flgE NOLOHH_21190 0.32 +0.9 4,170,658 - flgE NOLOHH_21190 0.32 -1.7 4,170,816 + flgE NOLOHH_21190 0.45 +0.9 4,170,845 + flgE NOLOHH_21190 0.48 -1.1 4,170,858 + flgE NOLOHH_21190 0.49 -2.8 4,170,858 + flgE NOLOHH_21190 0.49 -2.3 4,170,858 + flgE NOLOHH_21190 0.49 -1.9 4,170,859 - flgE NOLOHH_21190 0.49 +0.9 4,170,944 + flgE NOLOHH_21190 0.56 -2.4 4,170,944 + flgE NOLOHH_21190 0.56 -0.1 4,170,981 + flgE NOLOHH_21190 0.59 -0.4 4,171,176 + flgE NOLOHH_21190 0.75 -1.4
Or see this region's nucleotide sequence