Strain Fitness in Escherichia coli ECOR27 around NOLOHH_20080

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
3,953,763	+				-0.8
3,953,895	+	pspE	NOLOHH_20075	0.19	+2.4
3,953,895	+	pspE	NOLOHH_20075	0.19	+0.8
3,953,896	-	pspE	NOLOHH_20075	0.19	-0.8
3,954,134	-				-0.2
3,954,152	+				+1.2
3,954,190	-				+0.8
3,954,252	-	pspD	NOLOHH_20080	0.12	-1.5
3,954,328	-	pspD	NOLOHH_20080	0.46	-1.0
3,954,476	-				+2.4
3,954,480	-				+0.5
3,954,480	-				-0.8
3,954,505	-	pspC	NOLOHH_20085	0.14	+0.0
3,954,585	-	pspC	NOLOHH_20085	0.36	+0.8
3,954,646	-	pspC	NOLOHH_20085	0.53	+0.8
3,954,646	-	pspC	NOLOHH_20085	0.53	+0.5
3,954,646	-	pspC	NOLOHH_20085	0.53	+2.8
3,954,646	-	pspC	NOLOHH_20085	0.53	-1.0
3,954,870	+	pspB	NOLOHH_20090	0.25	-0.2
3,954,871	-	pspB	NOLOHH_20090	0.25	+1.5
3,955,039	-				+0.2
3,955,050	-				-0.8
3,955,091	-				+0.5
3,955,091	-				+3.8
3,955,091	-				+0.4
3,955,094	-				+1.2
3,955,339	-	pspA	NOLOHH_20095	0.37	+0.1
3,955,339	-	pspA	NOLOHH_20095	0.37	+0.8