Experiment: Bas69
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_18710 and marB are separated by 56 nucleotides marB and marA are separated by 31 nucleotides marA and marR are separated by 19 nucleotides marR and marC are separated by 211 nucleotides
NOLOHH_18710: NOLOHH_18710 - 6-phospho-beta-glucosidase, at 3,662,878 to 3,664,317
_18710
NOLOHH_18715: marB - multiple antibiotic resistance protein MarB, at 3,664,374 to 3,664,592
marB
NOLOHH_18720: marA - MDR efflux pump AcrAB transcriptional activator MarA, at 3,664,624 to 3,665,007
marA
NOLOHH_18725: marR - multiple antibiotic resistance transcriptional regulator MarR, at 3,665,027 to 3,665,461
marR
NOLOHH_18730: marC - NAAT family transporter MarC, at 3,665,673 to 3,666,338
marC
Position (kb)
3664
3665
3666 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3663.904 kb on + strand, within NOLOHH_18710 at 3663.912 kb on + strand, within NOLOHH_18710 at 3664.260 kb on + strand at 3664.376 kb on - strand at 3664.376 kb on - strand at 3664.376 kb on - strand at 3664.380 kb on - strand at 3664.380 kb on - strand at 3664.393 kb on + strand at 3664.393 kb on + strand at 3664.397 kb on - strand, within marB at 3664.421 kb on + strand, within marB at 3664.570 kb on - strand, within marB at 3664.693 kb on - strand, within marA at 3664.773 kb on - strand, within marA at 3664.824 kb on + strand, within marA at 3665.121 kb on - strand, within marR at 3665.121 kb on - strand, within marR at 3665.121 kb on - strand, within marR at 3665.142 kb on - strand, within marR at 3665.186 kb on - strand, within marR at 3665.222 kb on - strand, within marR at 3665.243 kb on - strand, within marR at 3665.297 kb on - strand, within marR at 3665.297 kb on - strand, within marR at 3665.297 kb on - strand, within marR at 3665.300 kb on - strand, within marR at 3665.300 kb on - strand, within marR at 3665.300 kb on - strand, within marR at 3665.333 kb on - strand, within marR at 3665.333 kb on - strand, within marR at 3665.368 kb on - strand, within marR at 3665.368 kb on - strand, within marR at 3665.368 kb on - strand, within marR at 3665.429 kb on - strand at 3665.453 kb on - strand at 3665.481 kb on - strand at 3665.820 kb on + strand, within marC at 3665.873 kb on + strand, within marC
Per-strain Table
Position Strand Gene LocusTag Fraction Bas69 remove 3,663,904 + NOLOHH_18710 0.71 +0.8 3,663,912 + NOLOHH_18710 0.72 +0.8 3,664,260 + +1.8 3,664,376 - -0.2 3,664,376 - -0.8 3,664,376 - -0.2 3,664,380 - +0.8 3,664,380 - -0.2 3,664,393 + -0.2 3,664,393 + +0.8 3,664,397 - marB NOLOHH_18715 0.11 +1.5 3,664,421 + marB NOLOHH_18715 0.21 +1.8 3,664,570 - marB NOLOHH_18715 0.89 -0.2 3,664,693 - marA NOLOHH_18720 0.18 -0.8 3,664,773 - marA NOLOHH_18720 0.39 -0.8 3,664,824 + marA NOLOHH_18720 0.52 -0.8 3,665,121 - marR NOLOHH_18725 0.22 +0.3 3,665,121 - marR NOLOHH_18725 0.22 -1.0 3,665,121 - marR NOLOHH_18725 0.22 +0.8 3,665,142 - marR NOLOHH_18725 0.26 -1.2 3,665,186 - marR NOLOHH_18725 0.37 -0.9 3,665,222 - marR NOLOHH_18725 0.45 +1.7 3,665,243 - marR NOLOHH_18725 0.50 +0.5 3,665,297 - marR NOLOHH_18725 0.62 -0.2 3,665,297 - marR NOLOHH_18725 0.62 -0.2 3,665,297 - marR NOLOHH_18725 0.62 -0.5 3,665,300 - marR NOLOHH_18725 0.63 -1.8 3,665,300 - marR NOLOHH_18725 0.63 -0.0 3,665,300 - marR NOLOHH_18725 0.63 +1.8 3,665,333 - marR NOLOHH_18725 0.70 +1.3 3,665,333 - marR NOLOHH_18725 0.70 +0.1 3,665,368 - marR NOLOHH_18725 0.78 -1.6 3,665,368 - marR NOLOHH_18725 0.78 +0.5 3,665,368 - marR NOLOHH_18725 0.78 +1.7 3,665,429 - +1.0 3,665,453 - -0.4 3,665,481 - -1.1 3,665,820 + marC NOLOHH_18730 0.22 +0.8 3,665,873 + marC NOLOHH_18730 0.30 -0.2
Or see this region's nucleotide sequence