Strain Fitness in Escherichia coli ECOR27 around NOLOHH_17415

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
3,417,816	+				+0.7
3,417,816	+				+0.1
3,417,816	+				+1.7
3,417,816	+				-0.3
3,417,962	-	ydjX	NOLOHH_17410	0.21	+0.7
3,418,042	+	ydjX	NOLOHH_17410	0.32	+2.3
3,418,044	+	ydjX	NOLOHH_17410	0.32	+1.3
3,418,177	+	ydjX	NOLOHH_17410	0.51	+0.7
3,418,177	+	ydjX	NOLOHH_17410	0.51	+0.7
3,418,205	+	ydjX	NOLOHH_17410	0.55	+0.7
3,418,364	+	ydjX	NOLOHH_17410	0.77	+0.7
3,418,374	+	ydjX	NOLOHH_17410	0.79	+0.4
3,418,418	+	ydjX	NOLOHH_17410	0.85	+2.3
3,418,470	+				-1.6
3,418,489	+				+0.1
3,418,774	-	xthA	NOLOHH_17415	0.10	-1.6
3,419,223	-	xthA	NOLOHH_17415	0.66	-0.9
3,419,345	-	xthA	NOLOHH_17415	0.81	-0.9
3,419,521	-				-0.3
3,419,782	+				+0.7
3,419,783	-				+0.1
3,419,801	+				+3.1
3,419,881	+				-0.6
3,419,958	+				-1.1
3,419,987	+				-0.3
3,420,014	+				+3.7
3,420,064	+				-0.3
3,420,064	+				+0.9
3,420,064	+				-1.3
3,420,150	+	astC	NOLOHH_17420	0.17	-0.7
3,420,150	+	astC	NOLOHH_17420	0.17	-1.3
3,420,249	+	astC	NOLOHH_17420	0.25	-1.3
3,420,451	+	astC	NOLOHH_17420	0.42	+0.9
3,420,453	+	astC	NOLOHH_17420	0.42	-0.3
3,420,492	+	astC	NOLOHH_17420	0.45	+1.6
3,420,492	+	astC	NOLOHH_17420	0.45	-0.1
3,420,492	+	astC	NOLOHH_17420	0.45	-0.7
3,420,492	+	astC	NOLOHH_17420	0.45	-0.3