Experiment: Bas69
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fliM and fliL are separated by 4 nucleotides fliL and fliK are separated by 104 nucleotides fliK and fliJ overlap by 4 nucleotides fliJ and fliI are separated by 18 nucleotides
NOLOHH_16310: fliM - flagellar motor switch protein FliM, at 3,212,222 to 3,213,226
fliM
NOLOHH_16315: fliL - flagellar basal body-associated protein FliL, at 3,213,231 to 3,213,695
fliL
NOLOHH_16320: fliK - flagellar hook length control protein FliK, at 3,213,800 to 3,214,927
fliK
NOLOHH_16325: fliJ - flagella biosynthesis chaperone FliJ, at 3,214,924 to 3,215,367
fliJ
NOLOHH_16330: fliI - flagellum-specific ATP synthase FliI, at 3,215,386 to 3,216,759
fliI
Position (kb)
3213
3214
3215 Strain fitness (log2 ratio)
-2
-1
0
1 at 3213.215 kb on - strand at 3213.475 kb on + strand, within fliL at 3213.596 kb on - strand, within fliL at 3213.596 kb on - strand, within fliL at 3213.679 kb on - strand at 3213.737 kb on + strand at 3213.834 kb on - strand at 3213.845 kb on + strand at 3213.868 kb on + strand at 3213.902 kb on + strand at 3214.049 kb on + strand, within fliK at 3214.049 kb on + strand, within fliK at 3214.050 kb on - strand, within fliK at 3214.186 kb on + strand, within fliK at 3214.282 kb on + strand, within fliK at 3214.339 kb on + strand, within fliK at 3214.367 kb on + strand, within fliK at 3215.107 kb on - strand, within fliJ at 3215.163 kb on - strand, within fliJ at 3215.532 kb on - strand, within fliI at 3215.781 kb on + strand, within fliI at 3215.783 kb on + strand, within fliI at 3215.783 kb on + strand, within fliI
Per-strain Table
Position Strand Gene LocusTag Fraction Bas69 remove 3,213,215 - -1.2 3,213,475 + fliL NOLOHH_16315 0.52 +0.8 3,213,596 - fliL NOLOHH_16315 0.78 -1.8 3,213,596 - fliL NOLOHH_16315 0.78 -1.2 3,213,679 - -0.2 3,213,737 + -0.2 3,213,834 - -2.0 3,213,845 + -1.5 3,213,868 + -1.2 3,213,902 + +0.4 3,214,049 + fliK NOLOHH_16320 0.22 -1.0 3,214,049 + fliK NOLOHH_16320 0.22 -1.2 3,214,050 - fliK NOLOHH_16320 0.22 -1.5 3,214,186 + fliK NOLOHH_16320 0.34 -0.2 3,214,282 + fliK NOLOHH_16320 0.43 -1.5 3,214,339 + fliK NOLOHH_16320 0.48 +0.8 3,214,367 + fliK NOLOHH_16320 0.50 -1.8 3,215,107 - fliJ NOLOHH_16325 0.41 -1.8 3,215,163 - fliJ NOLOHH_16325 0.54 -0.4 3,215,532 - fliI NOLOHH_16330 0.11 -2.5 3,215,781 + fliI NOLOHH_16330 0.29 -0.2 3,215,783 + fliI NOLOHH_16330 0.29 -0.2 3,215,783 + fliI NOLOHH_16330 0.29 -0.2
Or see this region's nucleotide sequence