Experiment: Bas69
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yehY and yehX overlap by 8 nucleotides yehX and yehW are separated by 4 nucleotides yehW and yohO overlap by 20 nucleotides yohO and mlrA are separated by 59 nucleotides
NOLOHH_15205: yehY - glycine betaine ABC transporter permease YehY, at 2,985,582 to 2,986,739
yehY
NOLOHH_15210: yehX - glycine betaine ABC transporter ATP binding protein YehX, at 2,986,732 to 2,987,658
yehX
NOLOHH_15215: yehW - glycine betaine ABC transporter permease YehW, at 2,987,663 to 2,988,394
yehW
NOLOHH_15220: yohO - protein YohO, at 2,988,375 to 2,988,482
yohO
NOLOHH_15225: mlrA - HTH-type transcriptional regulator MlrA, at 2,988,542 to 2,989,273
mlrA
Position (kb)
2986
2987
2988 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2985.829 kb on + strand, within yehY at 2986.039 kb on - strand, within yehY at 2986.067 kb on - strand, within yehY at 2986.067 kb on - strand, within yehY at 2986.078 kb on - strand, within yehY at 2986.330 kb on + strand, within yehY at 2986.330 kb on + strand, within yehY at 2986.375 kb on - strand, within yehY at 2986.495 kb on + strand, within yehY at 2986.552 kb on + strand, within yehY at 2986.552 kb on + strand, within yehY at 2986.552 kb on + strand, within yehY at 2986.639 kb on + strand at 2986.639 kb on + strand at 2986.743 kb on + strand at 2986.967 kb on - strand, within yehX at 2986.980 kb on + strand, within yehX at 2987.023 kb on - strand, within yehX at 2987.289 kb on + strand, within yehX at 2987.442 kb on + strand, within yehX at 2987.443 kb on - strand, within yehX at 2987.475 kb on + strand, within yehX at 2987.475 kb on + strand, within yehX at 2987.476 kb on - strand, within yehX at 2987.488 kb on + strand, within yehX at 2987.662 kb on + strand at 2987.929 kb on + strand, within yehW at 2987.929 kb on + strand, within yehW at 2987.929 kb on + strand, within yehW at 2988.296 kb on + strand, within yehW at 2988.398 kb on + strand, within yohO at 2988.399 kb on - strand, within yohO at 2988.474 kb on + strand at 2988.474 kb on + strand at 2988.475 kb on - strand at 2988.475 kb on - strand at 2988.483 kb on - strand at 2988.483 kb on - strand at 2988.519 kb on - strand at 2988.643 kb on + strand, within mlrA at 2988.644 kb on - strand, within mlrA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas69 remove 2,985,829 + yehY NOLOHH_15205 0.21 -0.8 2,986,039 - yehY NOLOHH_15205 0.39 +1.4 2,986,067 - yehY NOLOHH_15205 0.42 +0.0 2,986,067 - yehY NOLOHH_15205 0.42 -2.3 2,986,078 - yehY NOLOHH_15205 0.43 +0.8 2,986,330 + yehY NOLOHH_15205 0.65 -0.8 2,986,330 + yehY NOLOHH_15205 0.65 +2.4 2,986,375 - yehY NOLOHH_15205 0.68 +0.8 2,986,495 + yehY NOLOHH_15205 0.79 +1.8 2,986,552 + yehY NOLOHH_15205 0.84 +0.8 2,986,552 + yehY NOLOHH_15205 0.84 +0.2 2,986,552 + yehY NOLOHH_15205 0.84 -1.8 2,986,639 + -0.5 2,986,639 + -0.4 2,986,743 + -1.2 2,986,967 - yehX NOLOHH_15210 0.25 -2.3 2,986,980 + yehX NOLOHH_15210 0.27 -0.2 2,987,023 - yehX NOLOHH_15210 0.31 -1.5 2,987,289 + yehX NOLOHH_15210 0.60 -2.3 2,987,442 + yehX NOLOHH_15210 0.77 -1.8 2,987,443 - yehX NOLOHH_15210 0.77 +1.8 2,987,475 + yehX NOLOHH_15210 0.80 -2.2 2,987,475 + yehX NOLOHH_15210 0.80 +0.2 2,987,476 - yehX NOLOHH_15210 0.80 -0.8 2,987,488 + yehX NOLOHH_15210 0.82 +0.4 2,987,662 + +0.8 2,987,929 + yehW NOLOHH_15215 0.36 -0.8 2,987,929 + yehW NOLOHH_15215 0.36 -1.8 2,987,929 + yehW NOLOHH_15215 0.36 -2.5 2,988,296 + yehW NOLOHH_15215 0.86 -0.8 2,988,398 + yohO NOLOHH_15220 0.21 -0.2 2,988,399 - yohO NOLOHH_15220 0.22 -0.2 2,988,474 + -0.4 2,988,474 + +0.2 2,988,475 - +0.8 2,988,475 - +3.4 2,988,483 - -0.6 2,988,483 - -0.6 2,988,519 - +0.2 2,988,643 + mlrA NOLOHH_15225 0.14 +1.8 2,988,644 - mlrA NOLOHH_15225 0.14 +0.4
Or see this region's nucleotide sequence