Strain Fitness in Escherichia coli ECOR27 around NOLOHH_12055

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
2,335,251	-				+0.9
2,335,255	+				-0.5
2,335,255	+				+1.2
2,335,390	-				-1.6
2,335,401	-				-1.1
2,335,480	+	xni	NOLOHH_12050	0.17	-0.1
2,335,480	+	xni	NOLOHH_12050	0.17	-2.3
2,335,481	-	xni	NOLOHH_12050	0.17	+0.3
2,335,481	-	xni	NOLOHH_12050	0.17	-1.7
2,335,481	-	xni	NOLOHH_12050	0.17	+1.3
2,335,482	+	xni	NOLOHH_12050	0.17	+0.9
2,335,482	+	xni	NOLOHH_12050	0.17	+1.9
2,335,483	-	xni	NOLOHH_12050	0.17	+0.3
2,335,483	-	xni	NOLOHH_12050	0.17	-0.8
2,335,483	-	xni	NOLOHH_12050	0.17	+0.1
2,335,673	+	xni	NOLOHH_12050	0.40	-1.5
2,335,677	+	xni	NOLOHH_12050	0.40	-0.9
2,335,677	+	xni	NOLOHH_12050	0.40	-2.6
2,335,677	+	xni	NOLOHH_12050	0.40	-2.1
2,335,678	-	xni	NOLOHH_12050	0.41	+0.5
2,335,678	-	xni	NOLOHH_12050	0.41	-0.7
2,335,693	-	xni	NOLOHH_12050	0.42	+0.9
2,335,703	-	xni	NOLOHH_12050	0.43	-2.1
2,335,709	+	xni	NOLOHH_12050	0.44	+0.6
2,335,710	-	xni	NOLOHH_12050	0.44	-2.1
2,335,773	+	xni	NOLOHH_12050	0.52	-1.1
2,335,894	+	xni	NOLOHH_12050	0.66	-1.1
2,336,051	+	xni	NOLOHH_12050	0.85	-1.1
2,336,284	+				+0.4
2,336,284	+				-1.5
2,336,284	+				-1.5
2,336,285	-				-0.5
2,336,345	+	sdaB	NOLOHH_12055	0.10	-1.9
2,336,346	-	sdaB	NOLOHH_12055	0.11	-2.8
2,336,497	-	sdaB	NOLOHH_12055	0.22	-2.5
2,336,497	-	sdaB	NOLOHH_12055	0.22	-1.9
2,336,591	+	sdaB	NOLOHH_12055	0.28	-0.1
2,336,591	+	sdaB	NOLOHH_12055	0.28	-2.7
2,336,592	-	sdaB	NOLOHH_12055	0.29	-1.4
2,336,593	+	sdaB	NOLOHH_12055	0.29	-0.1
2,336,594	-	sdaB	NOLOHH_12055	0.29	-1.3
2,336,594	-	sdaB	NOLOHH_12055	0.29	-2.7
2,336,671	+	sdaB	NOLOHH_12055	0.34	+0.9
2,336,672	-	sdaB	NOLOHH_12055	0.34	-0.4
2,336,842	-	sdaB	NOLOHH_12055	0.47	-2.4
2,337,134	+	sdaB	NOLOHH_12055	0.68	-1.6
2,337,135	-	sdaB	NOLOHH_12055	0.68	+0.9
2,337,135	-	sdaB	NOLOHH_12055	0.68	+1.9
2,337,135	-	sdaB	NOLOHH_12055	0.68	-1.7
2,337,135	-	sdaB	NOLOHH_12055	0.68	+0.1
2,337,139	+	sdaB	NOLOHH_12055	0.68	-2.3
2,337,139	+	sdaB	NOLOHH_12055	0.68	-0.1
2,337,139	+	sdaB	NOLOHH_12055	0.68	-1.5
2,337,140	-	sdaB	NOLOHH_12055	0.69	+0.1
2,337,140	-	sdaB	NOLOHH_12055	0.69	-2.5
2,337,140	-	sdaB	NOLOHH_12055	0.69	-1.7
2,337,142	+	sdaB	NOLOHH_12055	0.69	-0.3
2,337,142	+	sdaB	NOLOHH_12055	0.69	-0.7
2,337,142	+	sdaB	NOLOHH_12055	0.69	-0.1
2,337,143	-	sdaB	NOLOHH_12055	0.69	-2.8
2,337,143	-	sdaB	NOLOHH_12055	0.69	-0.4
2,337,143	-	sdaB	NOLOHH_12055	0.69	-1.5
2,337,143	-	sdaB	NOLOHH_12055	0.69	-1.5
2,337,155	-	sdaB	NOLOHH_12055	0.70	-2.1
2,337,296	+	sdaB	NOLOHH_12055	0.80	-0.7
2,337,297	-	sdaB	NOLOHH_12055	0.80	-1.6
2,337,368	+	sdaB	NOLOHH_12055	0.85	+0.9
2,337,371	+	sdaB	NOLOHH_12055	0.85	-1.7
2,337,371	+	sdaB	NOLOHH_12055	0.85	-1.5
2,337,372	-	sdaB	NOLOHH_12055	0.86	-0.1
2,337,380	+	sdaB	NOLOHH_12055	0.86	-1.9
2,337,559	-				-2.5
2,337,576	+				+1.4
2,337,576	+				-1.5
2,337,577	-				-1.4
2,337,628	+				+3.2
2,337,629	-				+1.2
2,337,629	-				-0.6
2,337,629	-				+2.4
2,337,644	-				+0.5
2,337,644	-				+2.0
2,337,688	-				+0.4
2,337,688	-				+1.6
2,337,710	-				+0.9
2,337,714	-				-0.7
2,337,714	-				+2.4
2,337,743	-				+0.7
2,337,896	+	sdaC	NOLOHH_12060	0.21	-0.1
2,337,918	-	sdaC	NOLOHH_12060	0.23	+0.2
2,338,419	-	sdaC	NOLOHH_12060	0.61	+0.3
2,338,550	+	sdaC	NOLOHH_12060	0.72	-1.7