Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16810

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntpurH and OKGIIK_16810 are separated by 69 nucleotidesOKGIIK_16810 and OKGIIK_16815 are separated by 145 nucleotides OKGIIK_16805: purH - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 3,685,929 to 3,687,539 purH OKGIIK_16810: OKGIIK_16810 - Putative Fis-like DNA-binding protein, at 3,687,609 to 3,687,932 _16810 OKGIIK_16815: OKGIIK_16815 - DUF3426 domain-containing protein, at 3,688,078 to 3,688,938 _16815 Position (kb) 3687 3688Strain fitness (log2 ratio) -2 -1 0 1 2at 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.574 kb on + strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.575 kb on - strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.610 kb on + strandat 3687.611 kb on - strandat 3687.611 kb on - strandat 3687.611 kb on - strandat 3687.611 kb on - strandat 3687.796 kb on + strand, within OKGIIK_16810at 3687.804 kb on + strand, within OKGIIK_16810at 3687.915 kb on + strandat 3687.976 kb on - strandat 3688.072 kb on + strandat 3688.072 kb on + strandat 3688.073 kb on - strandat 3688.073 kb on - strandat 3688.073 kb on - strandat 3688.079 kb on + strandat 3688.080 kb on - strandat 3688.080 kb on - strandat 3688.080 kb on - strandat 3688.080 kb on - strandat 3688.196 kb on + strand, within OKGIIK_16815at 3688.196 kb on + strand, within OKGIIK_16815at 3688.196 kb on + strand, within OKGIIK_16815at 3688.197 kb on - strand, within OKGIIK_16815at 3688.227 kb on + strand, within OKGIIK_16815at 3688.227 kb on + strand, within OKGIIK_16815at 3688.730 kb on + strand, within OKGIIK_16815

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,687,574 + +0.9
3,687,574 + -1.6
3,687,574 + +0.1
3,687,574 + -2.0
3,687,574 + -0.6
3,687,574 + -0.6
3,687,574 + -1.1
3,687,574 + +1.0
3,687,574 + -0.9
3,687,574 + -0.8
3,687,574 + +0.9
3,687,574 + -1.3
3,687,574 + +0.9
3,687,574 + -1.2
3,687,575 - +0.2
3,687,575 - +0.6
3,687,575 - +0.2
3,687,575 - -1.3
3,687,575 - -0.5
3,687,575 - +0.6
3,687,575 - +0.9
3,687,575 - -0.6
3,687,575 - +1.0
3,687,575 - +2.3
3,687,575 - -1.2
3,687,575 - -1.6
3,687,610 + +0.4
3,687,610 + +1.4
3,687,610 + +0.0
3,687,610 + -0.9
3,687,610 + +1.9
3,687,610 + -0.4
3,687,610 + -0.6
3,687,611 - -1.4
3,687,611 - -1.0
3,687,611 - -0.9
3,687,611 - -2.0
3,687,796 + OKGIIK_16810 0.58 -0.7
3,687,804 + OKGIIK_16810 0.60 -0.9
3,687,915 + -0.4
3,687,976 - +0.0
3,688,072 + -0.7
3,688,072 + -0.1
3,688,073 - +1.0
3,688,073 - -1.2
3,688,073 - -1.2
3,688,079 + -0.9
3,688,080 - +0.3
3,688,080 - -1.2
3,688,080 - +1.4
3,688,080 - -1.2
3,688,196 + OKGIIK_16815 0.14 -1.0
3,688,196 + OKGIIK_16815 0.14 -0.9
3,688,196 + OKGIIK_16815 0.14 +0.7
3,688,197 - OKGIIK_16815 0.14 +0.5
3,688,227 + OKGIIK_16815 0.17 +1.7
3,688,227 + OKGIIK_16815 0.17 -0.2
3,688,730 + OKGIIK_16815 0.76 -0.4

Or see this region's nucleotide sequence