Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_16370 and folA are separated by 68 nucleotides folA and OKGIIK_16380 are separated by 182 nucleotides OKGIIK_16380 and OKGIIK_16385 are separated by 208 nucleotides
OKGIIK_16370: OKGIIK_16370 - multifunctional CCA addition/repair protein, at 3,595,648 to 3,596,895
_16370
OKGIIK_16375: folA - deaminase, at 3,596,964 to 3,597,611
folA
OKGIIK_16380: OKGIIK_16380 - Carboxypeptidase regulatory-like domain-containing protein, at 3,597,794 to 3,598,180
_16380
OKGIIK_16385: OKGIIK_16385 - Sulfotransferase, at 3,598,389 to 3,599,945
_16385
Position (kb)
3596
3597
3598 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.886 kb on - strand at 3596.975 kb on + strand at 3596.975 kb on + strand at 3596.975 kb on + strand at 3596.975 kb on + strand at 3596.975 kb on + strand at 3596.976 kb on - strand at 3596.976 kb on - strand at 3596.976 kb on - strand at 3596.976 kb on - strand at 3596.976 kb on - strand at 3596.976 kb on - strand at 3596.976 kb on - strand at 3597.134 kb on - strand, within folA at 3597.134 kb on - strand, within folA at 3597.134 kb on - strand, within folA at 3597.134 kb on - strand, within folA at 3597.134 kb on - strand, within folA at 3597.134 kb on - strand, within folA at 3597.134 kb on - strand, within folA at 3597.307 kb on + strand, within folA at 3597.605 kb on + strand at 3597.605 kb on + strand at 3597.605 kb on + strand at 3597.605 kb on + strand at 3597.605 kb on + strand at 3597.606 kb on - strand at 3597.606 kb on - strand at 3597.655 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.683 kb on + strand at 3597.684 kb on - strand at 3597.684 kb on - strand at 3597.684 kb on - strand at 3597.684 kb on - strand at 3597.684 kb on - strand at 3597.758 kb on + strand at 3597.758 kb on + strand at 3597.758 kb on + strand at 3597.758 kb on + strand at 3597.758 kb on + strand at 3597.758 kb on + strand at 3597.759 kb on - strand at 3597.759 kb on - strand at 3597.759 kb on - strand at 3597.759 kb on - strand at 3597.795 kb on + strand at 3597.802 kb on + strand at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.912 kb on + strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3597.913 kb on - strand, within OKGIIK_16380 at 3598.154 kb on + strand at 3598.154 kb on + strand at 3598.154 kb on + strand at 3598.154 kb on + strand at 3598.154 kb on + strand at 3598.154 kb on + strand at 3598.154 kb on + strand at 3598.154 kb on + strand at 3598.154 kb on + strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.155 kb on - strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.158 kb on + strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.159 kb on - strand at 3598.239 kb on + strand at 3598.239 kb on + strand at 3598.239 kb on + strand at 3598.239 kb on + strand at 3598.239 kb on + strand at 3598.240 kb on - strand at 3598.321 kb on + strand at 3598.321 kb on + strand at 3598.321 kb on + strand at 3598.321 kb on + strand at 3598.321 kb on + strand at 3598.321 kb on + strand at 3598.321 kb on + strand at 3598.321 kb on + strand at 3598.321 kb on + strand at 3598.322 kb on - strand at 3598.322 kb on - strand at 3598.322 kb on - strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.342 kb on + strand at 3598.343 kb on - strand at 3598.343 kb on - strand at 3598.343 kb on - strand at 3598.343 kb on - strand at 3598.343 kb on - strand at 3598.343 kb on - strand at 3598.343 kb on - strand at 3598.343 kb on - strand at 3598.343 kb on - strand at 3598.343 kb on - strand at 3598.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,596,886 - +1.4 3,596,886 - +0.8 3,596,886 - -0.6 3,596,886 - +0.7 3,596,886 - -2.8 3,596,886 - -0.6 3,596,886 - -0.2 3,596,886 - -1.6 3,596,886 - -1.2 3,596,886 - -1.9 3,596,886 - +0.4 3,596,886 - +1.7 3,596,975 + -1.4 3,596,975 + -0.8 3,596,975 + +0.4 3,596,975 + +0.7 3,596,975 + -1.4 3,596,976 - +1.4 3,596,976 - +0.6 3,596,976 - +1.1 3,596,976 - +0.3 3,596,976 - -0.1 3,596,976 - -2.8 3,596,976 - +1.0 3,597,134 - folA OKGIIK_16375 0.26 -0.7 3,597,134 - folA OKGIIK_16375 0.26 +0.0 3,597,134 - folA OKGIIK_16375 0.26 -0.6 3,597,134 - folA OKGIIK_16375 0.26 -0.6 3,597,134 - folA OKGIIK_16375 0.26 +0.7 3,597,134 - folA OKGIIK_16375 0.26 +0.1 3,597,134 - folA OKGIIK_16375 0.26 -2.7 3,597,307 + folA OKGIIK_16375 0.53 -0.8 3,597,605 + +0.1 3,597,605 + -1.6 3,597,605 + +0.2 3,597,605 + -2.0 3,597,605 + -0.1 3,597,606 - -0.3 3,597,606 - -1.8 3,597,655 + -0.1 3,597,683 + +0.4 3,597,683 + +0.2 3,597,683 + +1.0 3,597,683 + -1.0 3,597,683 + +1.0 3,597,683 + +1.0 3,597,683 + -1.5 3,597,683 + -0.6 3,597,683 + -2.3 3,597,683 + -1.5 3,597,683 + -0.7 3,597,683 + +0.1 3,597,683 + -1.0 3,597,684 - -0.9 3,597,684 - -1.1 3,597,684 - +1.1 3,597,684 - -0.4 3,597,684 - -0.1 3,597,758 + +0.4 3,597,758 + -0.6 3,597,758 + -1.4 3,597,758 + -1.2 3,597,758 + -0.2 3,597,758 + +1.2 3,597,759 - +0.7 3,597,759 - -2.8 3,597,759 - +1.3 3,597,759 - +0.8 3,597,795 + -0.7 3,597,802 + -1.0 3,597,912 + OKGIIK_16380 0.30 +0.1 3,597,912 + OKGIIK_16380 0.30 -1.4 3,597,912 + OKGIIK_16380 0.30 +0.3 3,597,912 + OKGIIK_16380 0.30 +0.8 3,597,912 + OKGIIK_16380 0.30 -0.4 3,597,912 + OKGIIK_16380 0.30 +0.9 3,597,912 + OKGIIK_16380 0.30 -1.8 3,597,912 + OKGIIK_16380 0.30 -0.0 3,597,912 + OKGIIK_16380 0.30 -0.3 3,597,912 + OKGIIK_16380 0.30 +1.0 3,597,912 + OKGIIK_16380 0.30 -0.9 3,597,912 + OKGIIK_16380 0.30 +0.6 3,597,913 - OKGIIK_16380 0.31 -0.2 3,597,913 - OKGIIK_16380 0.31 +1.4 3,597,913 - OKGIIK_16380 0.31 +0.4 3,597,913 - OKGIIK_16380 0.31 -0.0 3,597,913 - OKGIIK_16380 0.31 -1.0 3,597,913 - OKGIIK_16380 0.31 -1.6 3,597,913 - OKGIIK_16380 0.31 +0.5 3,597,913 - OKGIIK_16380 0.31 +0.1 3,597,913 - OKGIIK_16380 0.31 -1.0 3,597,913 - OKGIIK_16380 0.31 +0.8 3,597,913 - OKGIIK_16380 0.31 +0.1 3,597,913 - OKGIIK_16380 0.31 +0.6 3,597,913 - OKGIIK_16380 0.31 +0.8 3,598,154 + +0.9 3,598,154 + -1.1 3,598,154 + +1.0 3,598,154 + +0.1 3,598,154 + +0.8 3,598,154 + -2.1 3,598,154 + -0.2 3,598,154 + -2.8 3,598,154 + +0.1 3,598,155 - +1.1 3,598,155 - +1.0 3,598,155 - +0.4 3,598,155 - +0.8 3,598,155 - -0.8 3,598,155 - -0.7 3,598,155 - +0.1 3,598,155 - -1.4 3,598,155 - -0.9 3,598,155 - +0.2 3,598,155 - -0.2 3,598,155 - +0.7 3,598,155 - -0.2 3,598,155 - -0.2 3,598,158 + -0.6 3,598,158 + -0.2 3,598,158 + -1.0 3,598,158 + -1.5 3,598,158 + -0.4 3,598,158 + -0.6 3,598,158 + -0.3 3,598,158 + -0.2 3,598,158 + -0.5 3,598,158 + +1.2 3,598,158 + +1.4 3,598,158 + -0.6 3,598,158 + +0.3 3,598,158 + -0.1 3,598,158 + +0.4 3,598,158 + -1.9 3,598,158 + +0.2 3,598,158 + +0.1 3,598,158 + -0.4 3,598,158 + -0.6 3,598,158 + -0.7 3,598,158 + +0.1 3,598,158 + +1.9 3,598,158 + +0.9 3,598,158 + -0.4 3,598,158 + -0.1 3,598,158 + +0.8 3,598,158 + -1.9 3,598,159 - +0.4 3,598,159 - -0.9 3,598,159 - -0.8 3,598,159 - -0.9 3,598,159 - -0.0 3,598,159 - -1.2 3,598,159 - +0.4 3,598,159 - -0.3 3,598,159 - -0.8 3,598,159 - -1.2 3,598,159 - -0.9 3,598,159 - -0.2 3,598,159 - +1.0 3,598,159 - -2.2 3,598,159 - -0.6 3,598,159 - +0.0 3,598,159 - +1.0 3,598,159 - -0.0 3,598,159 - +1.0 3,598,159 - -0.6 3,598,159 - -0.1 3,598,159 - -0.2 3,598,159 - +0.1 3,598,159 - -0.4 3,598,159 - -0.5 3,598,159 - -0.2 3,598,159 - -0.3 3,598,239 + -1.9 3,598,239 + +0.4 3,598,239 + -1.0 3,598,239 + +2.0 3,598,239 + -0.7 3,598,240 - -0.6 3,598,321 + +0.9 3,598,321 + -0.4 3,598,321 + -1.2 3,598,321 + +0.4 3,598,321 + -0.9 3,598,321 + +1.1 3,598,321 + -1.2 3,598,321 + -0.2 3,598,321 + +0.6 3,598,322 - -0.2 3,598,322 - -1.2 3,598,322 - -0.7 3,598,342 + -2.2 3,598,342 + +1.7 3,598,342 + -0.4 3,598,342 + -0.0 3,598,342 + +0.4 3,598,342 + -0.3 3,598,342 + +0.7 3,598,342 + -0.6 3,598,342 + -4.1 3,598,342 + +0.9 3,598,342 + -0.1 3,598,342 + -1.0 3,598,342 + -0.8 3,598,342 + -1.2 3,598,342 + -0.3 3,598,342 + -0.6 3,598,343 - +0.2 3,598,343 - +1.8 3,598,343 - +0.4 3,598,343 - +0.7 3,598,343 - +1.0 3,598,343 - -1.2 3,598,343 - +0.4 3,598,343 - +0.7 3,598,343 - +0.6 3,598,343 - +0.7 3,598,343 - +0.2
Or see this region's nucleotide sequence