Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16375

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_16370 and folA are separated by 68 nucleotidesfolA and OKGIIK_16380 are separated by 182 nucleotidesOKGIIK_16380 and OKGIIK_16385 are separated by 208 nucleotides OKGIIK_16370: OKGIIK_16370 - multifunctional CCA addition/repair protein, at 3,595,648 to 3,596,895 _16370 OKGIIK_16375: folA - deaminase, at 3,596,964 to 3,597,611 folA OKGIIK_16380: OKGIIK_16380 - Carboxypeptidase regulatory-like domain-containing protein, at 3,597,794 to 3,598,180 _16380 OKGIIK_16385: OKGIIK_16385 - Sulfotransferase, at 3,598,389 to 3,599,945 _16385 Position (kb) 3596 3597 3598Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.886 kb on - strandat 3596.975 kb on + strandat 3596.975 kb on + strandat 3596.975 kb on + strandat 3596.975 kb on + strandat 3596.975 kb on + strandat 3596.976 kb on - strandat 3596.976 kb on - strandat 3596.976 kb on - strandat 3596.976 kb on - strandat 3596.976 kb on - strandat 3596.976 kb on - strandat 3596.976 kb on - strandat 3597.134 kb on - strand, within folAat 3597.134 kb on - strand, within folAat 3597.134 kb on - strand, within folAat 3597.134 kb on - strand, within folAat 3597.134 kb on - strand, within folAat 3597.134 kb on - strand, within folAat 3597.134 kb on - strand, within folAat 3597.307 kb on + strand, within folAat 3597.605 kb on + strandat 3597.605 kb on + strandat 3597.605 kb on + strandat 3597.605 kb on + strandat 3597.605 kb on + strandat 3597.606 kb on - strandat 3597.606 kb on - strandat 3597.655 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.683 kb on + strandat 3597.684 kb on - strandat 3597.684 kb on - strandat 3597.684 kb on - strandat 3597.684 kb on - strandat 3597.684 kb on - strandat 3597.758 kb on + strandat 3597.758 kb on + strandat 3597.758 kb on + strandat 3597.758 kb on + strandat 3597.758 kb on + strandat 3597.758 kb on + strandat 3597.759 kb on - strandat 3597.759 kb on - strandat 3597.759 kb on - strandat 3597.759 kb on - strandat 3597.795 kb on + strandat 3597.802 kb on + strandat 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.912 kb on + strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3597.913 kb on - strand, within OKGIIK_16380at 3598.154 kb on + strandat 3598.154 kb on + strandat 3598.154 kb on + strandat 3598.154 kb on + strandat 3598.154 kb on + strandat 3598.154 kb on + strandat 3598.154 kb on + strandat 3598.154 kb on + strandat 3598.154 kb on + strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.155 kb on - strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.158 kb on + strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.159 kb on - strandat 3598.239 kb on + strandat 3598.239 kb on + strandat 3598.239 kb on + strandat 3598.239 kb on + strandat 3598.239 kb on + strandat 3598.240 kb on - strandat 3598.321 kb on + strandat 3598.321 kb on + strandat 3598.321 kb on + strandat 3598.321 kb on + strandat 3598.321 kb on + strandat 3598.321 kb on + strandat 3598.321 kb on + strandat 3598.321 kb on + strandat 3598.321 kb on + strandat 3598.322 kb on - strandat 3598.322 kb on - strandat 3598.322 kb on - strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.342 kb on + strandat 3598.343 kb on - strandat 3598.343 kb on - strandat 3598.343 kb on - strandat 3598.343 kb on - strandat 3598.343 kb on - strandat 3598.343 kb on - strandat 3598.343 kb on - strandat 3598.343 kb on - strandat 3598.343 kb on - strandat 3598.343 kb on - strandat 3598.343 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,596,886 - +1.4
3,596,886 - +0.8
3,596,886 - -0.6
3,596,886 - +0.7
3,596,886 - -2.8
3,596,886 - -0.6
3,596,886 - -0.2
3,596,886 - -1.6
3,596,886 - -1.2
3,596,886 - -1.9
3,596,886 - +0.4
3,596,886 - +1.7
3,596,975 + -1.4
3,596,975 + -0.8
3,596,975 + +0.4
3,596,975 + +0.7
3,596,975 + -1.4
3,596,976 - +1.4
3,596,976 - +0.6
3,596,976 - +1.1
3,596,976 - +0.3
3,596,976 - -0.1
3,596,976 - -2.8
3,596,976 - +1.0
3,597,134 - folA OKGIIK_16375 0.26 -0.7
3,597,134 - folA OKGIIK_16375 0.26 +0.0
3,597,134 - folA OKGIIK_16375 0.26 -0.6
3,597,134 - folA OKGIIK_16375 0.26 -0.6
3,597,134 - folA OKGIIK_16375 0.26 +0.7
3,597,134 - folA OKGIIK_16375 0.26 +0.1
3,597,134 - folA OKGIIK_16375 0.26 -2.7
3,597,307 + folA OKGIIK_16375 0.53 -0.8
3,597,605 + +0.1
3,597,605 + -1.6
3,597,605 + +0.2
3,597,605 + -2.0
3,597,605 + -0.1
3,597,606 - -0.3
3,597,606 - -1.8
3,597,655 + -0.1
3,597,683 + +0.4
3,597,683 + +0.2
3,597,683 + +1.0
3,597,683 + -1.0
3,597,683 + +1.0
3,597,683 + +1.0
3,597,683 + -1.5
3,597,683 + -0.6
3,597,683 + -2.3
3,597,683 + -1.5
3,597,683 + -0.7
3,597,683 + +0.1
3,597,683 + -1.0
3,597,684 - -0.9
3,597,684 - -1.1
3,597,684 - +1.1
3,597,684 - -0.4
3,597,684 - -0.1
3,597,758 + +0.4
3,597,758 + -0.6
3,597,758 + -1.4
3,597,758 + -1.2
3,597,758 + -0.2
3,597,758 + +1.2
3,597,759 - +0.7
3,597,759 - -2.8
3,597,759 - +1.3
3,597,759 - +0.8
3,597,795 + -0.7
3,597,802 + -1.0
3,597,912 + OKGIIK_16380 0.30 +0.1
3,597,912 + OKGIIK_16380 0.30 -1.4
3,597,912 + OKGIIK_16380 0.30 +0.3
3,597,912 + OKGIIK_16380 0.30 +0.8
3,597,912 + OKGIIK_16380 0.30 -0.4
3,597,912 + OKGIIK_16380 0.30 +0.9
3,597,912 + OKGIIK_16380 0.30 -1.8
3,597,912 + OKGIIK_16380 0.30 -0.0
3,597,912 + OKGIIK_16380 0.30 -0.3
3,597,912 + OKGIIK_16380 0.30 +1.0
3,597,912 + OKGIIK_16380 0.30 -0.9
3,597,912 + OKGIIK_16380 0.30 +0.6
3,597,913 - OKGIIK_16380 0.31 -0.2
3,597,913 - OKGIIK_16380 0.31 +1.4
3,597,913 - OKGIIK_16380 0.31 +0.4
3,597,913 - OKGIIK_16380 0.31 -0.0
3,597,913 - OKGIIK_16380 0.31 -1.0
3,597,913 - OKGIIK_16380 0.31 -1.6
3,597,913 - OKGIIK_16380 0.31 +0.5
3,597,913 - OKGIIK_16380 0.31 +0.1
3,597,913 - OKGIIK_16380 0.31 -1.0
3,597,913 - OKGIIK_16380 0.31 +0.8
3,597,913 - OKGIIK_16380 0.31 +0.1
3,597,913 - OKGIIK_16380 0.31 +0.6
3,597,913 - OKGIIK_16380 0.31 +0.8
3,598,154 + +0.9
3,598,154 + -1.1
3,598,154 + +1.0
3,598,154 + +0.1
3,598,154 + +0.8
3,598,154 + -2.1
3,598,154 + -0.2
3,598,154 + -2.8
3,598,154 + +0.1
3,598,155 - +1.1
3,598,155 - +1.0
3,598,155 - +0.4
3,598,155 - +0.8
3,598,155 - -0.8
3,598,155 - -0.7
3,598,155 - +0.1
3,598,155 - -1.4
3,598,155 - -0.9
3,598,155 - +0.2
3,598,155 - -0.2
3,598,155 - +0.7
3,598,155 - -0.2
3,598,155 - -0.2
3,598,158 + -0.6
3,598,158 + -0.2
3,598,158 + -1.0
3,598,158 + -1.5
3,598,158 + -0.4
3,598,158 + -0.6
3,598,158 + -0.3
3,598,158 + -0.2
3,598,158 + -0.5
3,598,158 + +1.2
3,598,158 + +1.4
3,598,158 + -0.6
3,598,158 + +0.3
3,598,158 + -0.1
3,598,158 + +0.4
3,598,158 + -1.9
3,598,158 + +0.2
3,598,158 + +0.1
3,598,158 + -0.4
3,598,158 + -0.6
3,598,158 + -0.7
3,598,158 + +0.1
3,598,158 + +1.9
3,598,158 + +0.9
3,598,158 + -0.4
3,598,158 + -0.1
3,598,158 + +0.8
3,598,158 + -1.9
3,598,159 - +0.4
3,598,159 - -0.9
3,598,159 - -0.8
3,598,159 - -0.9
3,598,159 - -0.0
3,598,159 - -1.2
3,598,159 - +0.4
3,598,159 - -0.3
3,598,159 - -0.8
3,598,159 - -1.2
3,598,159 - -0.9
3,598,159 - -0.2
3,598,159 - +1.0
3,598,159 - -2.2
3,598,159 - -0.6
3,598,159 - +0.0
3,598,159 - +1.0
3,598,159 - -0.0
3,598,159 - +1.0
3,598,159 - -0.6
3,598,159 - -0.1
3,598,159 - -0.2
3,598,159 - +0.1
3,598,159 - -0.4
3,598,159 - -0.5
3,598,159 - -0.2
3,598,159 - -0.3
3,598,239 + -1.9
3,598,239 + +0.4
3,598,239 + -1.0
3,598,239 + +2.0
3,598,239 + -0.7
3,598,240 - -0.6
3,598,321 + +0.9
3,598,321 + -0.4
3,598,321 + -1.2
3,598,321 + +0.4
3,598,321 + -0.9
3,598,321 + +1.1
3,598,321 + -1.2
3,598,321 + -0.2
3,598,321 + +0.6
3,598,322 - -0.2
3,598,322 - -1.2
3,598,322 - -0.7
3,598,342 + -2.2
3,598,342 + +1.7
3,598,342 + -0.4
3,598,342 + -0.0
3,598,342 + +0.4
3,598,342 + -0.3
3,598,342 + +0.7
3,598,342 + -0.6
3,598,342 + -4.1
3,598,342 + +0.9
3,598,342 + -0.1
3,598,342 + -1.0
3,598,342 + -0.8
3,598,342 + -1.2
3,598,342 + -0.3
3,598,342 + -0.6
3,598,343 - +0.2
3,598,343 - +1.8
3,598,343 - +0.4
3,598,343 - +0.7
3,598,343 - +1.0
3,598,343 - -1.2
3,598,343 - +0.4
3,598,343 - +0.7
3,598,343 - +0.6
3,598,343 - +0.7
3,598,343 - +0.2

Or see this region's nucleotide sequence