Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt asd and OKGIIK_04820 are separated by 2 nucleotides OKGIIK_04820 and OKGIIK_04825 are separated by 171 nucleotides
OKGIIK_04815: asd - aspartate-semialdehyde dehydrogenase, at 1,047,183 to 1,048,214
asd
OKGIIK_04820: OKGIIK_04820 - hypothetical protein, at 1,048,217 to 1,048,513
_04820
OKGIIK_04825: OKGIIK_04825 - Fimbrial protein FimV, at 1,048,685 to 1,051,072
_04825
Position (kb)
1048
1049 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1048.206 kb on + strand at 1048.206 kb on + strand at 1048.206 kb on + strand at 1048.206 kb on + strand at 1048.206 kb on + strand at 1048.206 kb on + strand at 1048.206 kb on + strand at 1048.206 kb on + strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.207 kb on - strand at 1048.541 kb on + strand at 1048.541 kb on + strand at 1048.541 kb on + strand at 1048.542 kb on - strand at 1048.542 kb on - strand at 1048.542 kb on - strand at 1048.542 kb on - strand at 1048.542 kb on - strand at 1048.542 kb on - strand at 1048.558 kb on + strand at 1048.558 kb on + strand at 1048.558 kb on + strand at 1048.558 kb on + strand at 1048.559 kb on - strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.571 kb on + strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.572 kb on - strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.586 kb on + strand at 1048.587 kb on - strand at 1048.587 kb on - strand at 1048.587 kb on - strand at 1048.587 kb on - strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.592 kb on + strand at 1048.593 kb on + strand at 1048.593 kb on - strand at 1048.593 kb on - strand at 1048.593 kb on - strand at 1048.593 kb on - strand at 1048.593 kb on - strand at 1048.593 kb on - strand at 1048.593 kb on - strand at 1048.593 kb on - strand at 1048.593 kb on - strand at 1048.597 kb on + strand at 1048.597 kb on + strand at 1048.597 kb on + strand at 1048.597 kb on + strand at 1048.597 kb on + strand at 1048.597 kb on + strand at 1048.597 kb on + strand at 1048.597 kb on + strand at 1048.598 kb on - strand at 1048.598 kb on - strand at 1048.598 kb on - strand at 1048.598 kb on - strand at 1048.598 kb on - strand at 1048.598 kb on - strand at 1048.598 kb on - strand at 1048.598 kb on - strand at 1048.598 kb on - strand at 1048.735 kb on + strand at 1048.939 kb on + strand, within OKGIIK_04825 at 1048.939 kb on + strand, within OKGIIK_04825 at 1048.939 kb on + strand, within OKGIIK_04825 at 1048.939 kb on + strand, within OKGIIK_04825 at 1048.939 kb on + strand, within OKGIIK_04825 at 1048.940 kb on - strand, within OKGIIK_04825 at 1048.940 kb on - strand, within OKGIIK_04825 at 1049.051 kb on + strand, within OKGIIK_04825 at 1049.052 kb on - strand, within OKGIIK_04825 at 1049.052 kb on - strand, within OKGIIK_04825 at 1049.391 kb on - strand, within OKGIIK_04825
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,048,206 + +0.0 1,048,206 + +1.4 1,048,206 + +0.3 1,048,206 + +1.3 1,048,206 + -0.2 1,048,206 + -1.7 1,048,206 + -0.8 1,048,206 + +1.9 1,048,207 - +0.8 1,048,207 - +0.0 1,048,207 - -1.0 1,048,207 - -0.4 1,048,207 - -0.1 1,048,207 - +1.6 1,048,207 - +0.9 1,048,207 - -0.3 1,048,207 - +0.9 1,048,207 - +0.2 1,048,207 - +0.7 1,048,207 - +0.8 1,048,207 - +0.6 1,048,541 + +0.4 1,048,541 + -0.2 1,048,541 + +0.9 1,048,542 - -1.0 1,048,542 - -0.4 1,048,542 - -1.1 1,048,542 - +0.3 1,048,542 - +1.8 1,048,542 - +0.9 1,048,558 + -0.5 1,048,558 + +0.9 1,048,558 + -1.7 1,048,558 + -0.4 1,048,559 - +0.4 1,048,571 + -1.2 1,048,571 + +1.1 1,048,571 + +0.2 1,048,571 + -0.7 1,048,571 + -0.1 1,048,571 + +0.2 1,048,571 + -0.3 1,048,571 + +0.3 1,048,571 + +0.0 1,048,571 + +0.6 1,048,571 + +0.9 1,048,571 + -1.6 1,048,571 + -0.6 1,048,572 - +0.8 1,048,572 - +0.3 1,048,572 - -1.2 1,048,572 - -1.4 1,048,572 - -0.6 1,048,572 - -0.6 1,048,572 - -0.2 1,048,572 - -1.7 1,048,572 - -0.4 1,048,572 - -1.6 1,048,572 - -1.2 1,048,586 + -0.9 1,048,586 + +0.4 1,048,586 + +1.0 1,048,586 + -0.3 1,048,586 + +0.6 1,048,586 + +0.6 1,048,586 + +0.0 1,048,586 + +0.0 1,048,586 + +0.0 1,048,586 + -0.7 1,048,586 + -0.6 1,048,586 + +0.5 1,048,586 + +0.6 1,048,587 - +0.2 1,048,587 - +0.8 1,048,587 - +0.6 1,048,587 - +0.2 1,048,592 + -0.1 1,048,592 + +1.0 1,048,592 + -1.2 1,048,592 + +1.4 1,048,592 + -0.2 1,048,592 + +0.4 1,048,592 + +0.4 1,048,592 + +0.9 1,048,592 + -0.4 1,048,592 + -1.7 1,048,592 + +0.5 1,048,592 + -0.1 1,048,592 + -1.2 1,048,592 + +0.2 1,048,593 + -1.0 1,048,593 - +0.6 1,048,593 - -0.1 1,048,593 - -0.4 1,048,593 - -0.7 1,048,593 - -2.0 1,048,593 - +0.3 1,048,593 - -1.7 1,048,593 - +1.8 1,048,593 - -0.7 1,048,597 + -0.4 1,048,597 + -1.7 1,048,597 + +1.6 1,048,597 + -0.8 1,048,597 + -1.5 1,048,597 + -2.3 1,048,597 + +0.9 1,048,597 + +0.2 1,048,598 - -0.3 1,048,598 - -0.4 1,048,598 - +0.1 1,048,598 - +1.3 1,048,598 - +0.0 1,048,598 - -0.2 1,048,598 - -0.8 1,048,598 - +1.2 1,048,598 - +0.0 1,048,735 + +0.3 1,048,939 + OKGIIK_04825 0.11 +0.8 1,048,939 + OKGIIK_04825 0.11 +0.5 1,048,939 + OKGIIK_04825 0.11 +0.1 1,048,939 + OKGIIK_04825 0.11 +0.6 1,048,939 + OKGIIK_04825 0.11 -0.5 1,048,940 - OKGIIK_04825 0.11 -1.0 1,048,940 - OKGIIK_04825 0.11 -2.6 1,049,051 + OKGIIK_04825 0.15 -1.3 1,049,052 - OKGIIK_04825 0.15 -1.1 1,049,052 - OKGIIK_04825 0.15 -1.6 1,049,391 - OKGIIK_04825 0.30 +0.7
Or see this region's nucleotide sequence