Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_03940 and OKGIIK_03945 are separated by 26 nucleotides OKGIIK_03945 and mutT overlap by 4 nucleotides mutT and OKGIIK_03955 overlap by 4 nucleotides OKGIIK_03955 and caiD are separated by 87 nucleotides caiD and OKGIIK_03965 are separated by 18 nucleotides
OKGIIK_03940: OKGIIK_03940 - Peptidyl-prolyl cis-trans isomerase, at 864,936 to 865,664
_03940
OKGIIK_03945: OKGIIK_03945 - DUF1289 domain-containing protein, at 865,691 to 865,882
_03945
OKGIIK_03950: mutT - 8-oxo-dGTP pyrophosphatase MutT and related house-cleaning NTP pyrophosphohydrolases, NUDIX family, at 865,879 to 866,472
mutT
OKGIIK_03955: OKGIIK_03955 - Sulfurtransferase, at 866,469 to 867,317
_03955
OKGIIK_03960: caiD - enoyl-CoA hydratase/isomerase family protein, at 867,405 to 868,163
caiD
OKGIIK_03965: OKGIIK_03965 - DUF4139 domain-containing protein, at 868,182 to 869,648
_03965
Position (kb) 866
867
868 Strain fitness (log2 ratio) -2
-1
0
1
2 at 865.566 kb on + strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.677 kb on + strand at 865.677 kb on + strand at 865.678 kb on - strand at 865.678 kb on - strand at 865.678 kb on - strand at 865.678 kb on - strand at 865.998 kb on - strand, within mutT at 866.036 kb on + strand, within mutT at 866.036 kb on + strand, within mutT at 866.036 kb on + strand, within mutT at 866.037 kb on - strand, within mutT at 866.037 kb on - strand, within mutT at 866.194 kb on + strand, within mutT at 866.194 kb on + strand, within mutT at 866.195 kb on - strand, within mutT at 866.195 kb on - strand, within mutT at 866.195 kb on - strand, within mutT at 866.195 kb on - strand, within mutT at 866.272 kb on + strand, within mutT at 866.273 kb on - strand, within mutT at 866.273 kb on - strand, within mutT at 866.350 kb on + strand, within mutT at 866.350 kb on + strand, within mutT at 866.350 kb on + strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.818 kb on + strand, within OKGIIK_03955 at 866.819 kb on - strand, within OKGIIK_03955 at 866.819 kb on - strand, within OKGIIK_03955 at 866.926 kb on - strand, within OKGIIK_03955 at 867.078 kb on + strand, within OKGIIK_03955 at 867.078 kb on + strand, within OKGIIK_03955 at 867.079 kb on - strand, within OKGIIK_03955 at 867.079 kb on - strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.258 kb on + strand at 867.258 kb on + strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.323 kb on + strand at 867.324 kb on - strand at 867.324 kb on - strand at 867.324 kb on - strand at 867.324 kb on - strand at 867.324 kb on - strand at 867.380 kb on + strand at 867.380 kb on + strand at 867.395 kb on + strand at 867.395 kb on + strand at 867.395 kb on + strand at 867.395 kb on + strand at 867.395 kb on + strand at 867.396 kb on - strand at 867.413 kb on + strand at 867.413 kb on + strand at 867.414 kb on - strand at 867.515 kb on - strand, within caiD at 867.712 kb on + strand, within caiD at 867.712 kb on + strand, within caiD at 867.712 kb on + strand, within caiD at 867.712 kb on + strand, within caiD at 867.712 kb on + strand, within caiD at 867.712 kb on + strand, within caiD at 867.712 kb on + strand, within caiD at 867.712 kb on + strand, within caiD at 867.713 kb on - strand, within caiD at 867.713 kb on - strand, within caiD at 867.713 kb on - strand, within caiD at 867.713 kb on - strand, within caiD at 867.713 kb on - strand, within caiD at 867.937 kb on + strand, within caiD at 867.938 kb on - strand, within caiD at 867.938 kb on - strand, within caiD at 868.183 kb on + strand at 868.183 kb on + strand at 868.183 kb on + strand at 868.183 kb on + strand at 868.183 kb on + strand at 868.183 kb on + strand at 868.184 kb on - strand at 868.184 kb on - strand at 868.184 kb on - strand at 868.184 kb on - strand at 868.213 kb on + strand at 868.213 kb on + strand at 868.213 kb on + strand at 868.214 kb on - strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.226 kb on - strand at 868.278 kb on - strand at 868.278 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 865,566 + OKGIIK_03940 0.86 -0.2 865,566 + OKGIIK_03940 0.86 +0.4 865,566 + OKGIIK_03940 0.86 +0.2 865,566 + OKGIIK_03940 0.86 +0.0 865,677 + +0.3 865,677 + -1.5 865,678 - +0.1 865,678 - +1.6 865,678 - -1.0 865,678 - +1.1 865,998 - mutT OKGIIK_03950 0.20 -1.4 866,036 + mutT OKGIIK_03950 0.26 -2.0 866,036 + mutT OKGIIK_03950 0.26 -0.5 866,036 + mutT OKGIIK_03950 0.26 -0.5 866,037 - mutT OKGIIK_03950 0.27 +1.7 866,037 - mutT OKGIIK_03950 0.27 -0.2 866,194 + mutT OKGIIK_03950 0.53 +0.9 866,194 + mutT OKGIIK_03950 0.53 -1.2 866,195 - mutT OKGIIK_03950 0.53 +0.3 866,195 - mutT OKGIIK_03950 0.53 -1.3 866,195 - mutT OKGIIK_03950 0.53 -0.2 866,195 - mutT OKGIIK_03950 0.53 +1.3 866,272 + mutT OKGIIK_03950 0.66 -0.4 866,273 - mutT OKGIIK_03950 0.66 +1.0 866,273 - mutT OKGIIK_03950 0.66 -0.1 866,350 + mutT OKGIIK_03950 0.79 -0.6 866,350 + mutT OKGIIK_03950 0.79 -1.0 866,350 + mutT OKGIIK_03950 0.79 +0.4 866,351 - mutT OKGIIK_03950 0.79 +0.5 866,351 - mutT OKGIIK_03950 0.79 +0.7 866,351 - mutT OKGIIK_03950 0.79 -2.0 866,351 - mutT OKGIIK_03950 0.79 -0.0 866,351 - mutT OKGIIK_03950 0.79 +1.1 866,351 - mutT OKGIIK_03950 0.79 +0.2 866,440 + -2.1 866,440 + -0.3 866,440 + +0.3 866,440 + +0.4 866,440 + +0.0 866,440 + -1.0 866,440 + +1.1 866,440 + +0.7 866,440 + -0.6 866,440 + -1.0 866,440 + +0.9 866,441 - +0.0 866,441 - -0.6 866,441 - -1.4 866,441 - -1.2 866,441 - -0.1 866,441 - -0.1 866,441 - +0.6 866,441 - -0.7 866,441 - -0.7 866,441 - -2.0 866,441 - -0.3 866,441 - +0.6 866,441 - +0.8 866,441 - -0.8 866,586 + OKGIIK_03955 0.14 +1.2 866,586 + OKGIIK_03955 0.14 +0.3 866,586 + OKGIIK_03955 0.14 +0.2 866,586 + OKGIIK_03955 0.14 +0.0 866,586 + OKGIIK_03955 0.14 -0.7 866,586 + OKGIIK_03955 0.14 -0.4 866,586 + OKGIIK_03955 0.14 +1.0 866,587 - OKGIIK_03955 0.14 -0.6 866,587 - OKGIIK_03955 0.14 +0.3 866,587 - OKGIIK_03955 0.14 +0.0 866,587 - OKGIIK_03955 0.14 -0.6 866,587 - OKGIIK_03955 0.14 -0.7 866,587 - OKGIIK_03955 0.14 -0.3 866,587 - OKGIIK_03955 0.14 +0.6 866,587 - OKGIIK_03955 0.14 +1.8 866,587 - OKGIIK_03955 0.14 -0.4 866,587 - OKGIIK_03955 0.14 +0.0 866,587 - OKGIIK_03955 0.14 +0.9 866,587 - OKGIIK_03955 0.14 +0.1 866,587 - OKGIIK_03955 0.14 +0.4 866,587 - OKGIIK_03955 0.14 +0.3 866,587 - OKGIIK_03955 0.14 -1.0 866,587 - OKGIIK_03955 0.14 -0.4 866,587 - OKGIIK_03955 0.14 -1.4 866,587 - OKGIIK_03955 0.14 +0.3 866,587 - OKGIIK_03955 0.14 -1.4 866,587 - OKGIIK_03955 0.14 +0.6 866,587 - OKGIIK_03955 0.14 +0.1 866,754 + OKGIIK_03955 0.34 +0.6 866,754 + OKGIIK_03955 0.34 -0.5 866,754 + OKGIIK_03955 0.34 +0.2 866,754 + OKGIIK_03955 0.34 +0.1 866,754 + OKGIIK_03955 0.34 +0.3 866,754 + OKGIIK_03955 0.34 +0.9 866,754 + OKGIIK_03955 0.34 -1.3 866,755 - OKGIIK_03955 0.34 -0.5 866,755 - OKGIIK_03955 0.34 -0.8 866,755 - OKGIIK_03955 0.34 +0.2 866,755 - OKGIIK_03955 0.34 -0.2 866,755 - OKGIIK_03955 0.34 +0.6 866,755 - OKGIIK_03955 0.34 +0.1 866,755 - OKGIIK_03955 0.34 +0.4 866,755 - OKGIIK_03955 0.34 +0.4 866,755 - OKGIIK_03955 0.34 +0.3 866,755 - OKGIIK_03955 0.34 -0.2 866,818 + OKGIIK_03955 0.41 -0.2 866,819 - OKGIIK_03955 0.41 +0.3 866,819 - OKGIIK_03955 0.41 -0.9 866,926 - OKGIIK_03955 0.54 -0.8 867,078 + OKGIIK_03955 0.72 -0.2 867,078 + OKGIIK_03955 0.72 -0.7 867,079 - OKGIIK_03955 0.72 +0.0 867,079 - OKGIIK_03955 0.72 -0.6 867,210 + OKGIIK_03955 0.87 +1.9 867,210 + OKGIIK_03955 0.87 -1.0 867,210 + OKGIIK_03955 0.87 -1.0 867,210 + OKGIIK_03955 0.87 +0.6 867,210 + OKGIIK_03955 0.87 -0.4 867,210 + OKGIIK_03955 0.87 -0.4 867,210 + OKGIIK_03955 0.87 +1.9 867,210 + OKGIIK_03955 0.87 +0.0 867,211 - OKGIIK_03955 0.87 +0.8 867,211 - OKGIIK_03955 0.87 -0.4 867,211 - OKGIIK_03955 0.87 +0.3 867,211 - OKGIIK_03955 0.87 -1.4 867,211 - OKGIIK_03955 0.87 +1.2 867,211 - OKGIIK_03955 0.87 +0.6 867,211 - OKGIIK_03955 0.87 -1.9 867,211 - OKGIIK_03955 0.87 -0.2 867,211 - OKGIIK_03955 0.87 -1.2 867,211 - OKGIIK_03955 0.87 +1.0 867,211 - OKGIIK_03955 0.87 -0.4 867,211 - OKGIIK_03955 0.87 +1.9 867,211 - OKGIIK_03955 0.87 +0.8 867,211 - OKGIIK_03955 0.87 +0.7 867,211 - OKGIIK_03955 0.87 +0.9 867,211 - OKGIIK_03955 0.87 -0.4 867,211 - OKGIIK_03955 0.87 -0.7 867,258 + -0.2 867,258 + -0.4 867,259 - -1.0 867,259 - +0.0 867,259 - -1.1 867,323 + +0.8 867,324 - +1.3 867,324 - -1.2 867,324 - +0.4 867,324 - +1.6 867,324 - +0.6 867,380 + -0.4 867,380 + +0.0 867,395 + +0.3 867,395 + -0.8 867,395 + -0.9 867,395 + +0.6 867,395 + -1.0 867,396 - -2.3 867,413 + -0.4 867,413 + -0.5 867,414 - -2.0 867,515 - caiD OKGIIK_03960 0.14 +2.1 867,712 + caiD OKGIIK_03960 0.40 -0.1 867,712 + caiD OKGIIK_03960 0.40 -0.5 867,712 + caiD OKGIIK_03960 0.40 +0.7 867,712 + caiD OKGIIK_03960 0.40 -0.2 867,712 + caiD OKGIIK_03960 0.40 -1.3 867,712 + caiD OKGIIK_03960 0.40 -0.9 867,712 + caiD OKGIIK_03960 0.40 -0.1 867,712 + caiD OKGIIK_03960 0.40 -1.0 867,713 - caiD OKGIIK_03960 0.41 -1.0 867,713 - caiD OKGIIK_03960 0.41 +2.2 867,713 - caiD OKGIIK_03960 0.41 +0.0 867,713 - caiD OKGIIK_03960 0.41 -1.2 867,713 - caiD OKGIIK_03960 0.41 -0.7 867,937 + caiD OKGIIK_03960 0.70 +2.1 867,938 - caiD OKGIIK_03960 0.70 +0.6 867,938 - caiD OKGIIK_03960 0.70 +0.3 868,183 + +1.0 868,183 + +0.0 868,183 + -0.4 868,183 + -2.3 868,183 + -1.3 868,183 + +0.0 868,184 - +0.0 868,184 - +0.0 868,184 - +0.9 868,184 - +0.4 868,213 + -0.7 868,213 + -1.2 868,213 + +0.6 868,214 - -1.9 868,225 + -0.4 868,225 + -0.1 868,225 + +1.2 868,225 + +1.0 868,225 + +0.1 868,225 + +0.9 868,225 + +1.8 868,226 - -0.6 868,226 - -1.2 868,226 - -1.4 868,226 - -0.2 868,226 - -1.7 868,226 - -1.4 868,226 - +0.0 868,226 - -1.6 868,226 - +0.6 868,226 - +1.6 868,226 - +0.1 868,278 - -0.9 868,278 - -0.2
Or see this region's nucleotide sequence