Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mmsB and yHI9 are separated by 112 nucleotides yHI9 and glpG are separated by 185 nucleotides glpG and OKGIIK_03525 are separated by 86 nucleotides
OKGIIK_03510: mmsB - 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase, at 779,715 to 780,599
mmsB
OKGIIK_03515: yHI9 - PhzF family phenazine biosynthesis protein, at 780,712 to 781,590
yHI9
OKGIIK_03520: glpG - rhomboid family intramembrane serine protease, at 781,776 to 782,387
glpG
OKGIIK_03525: OKGIIK_03525 - histone H1-like repetitive region-containing protein, at 782,474 to 783,103
_03525
Position (kb) 780
781
782 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 780.052 kb on - strand, within mmsB at 780.052 kb on - strand, within mmsB at 780.052 kb on - strand, within mmsB at 780.052 kb on - strand, within mmsB at 780.052 kb on - strand, within mmsB at 780.068 kb on - strand, within mmsB at 780.107 kb on + strand, within mmsB at 780.108 kb on - strand, within mmsB at 780.214 kb on + strand, within mmsB at 780.214 kb on + strand, within mmsB at 780.214 kb on + strand, within mmsB at 780.215 kb on - strand, within mmsB at 780.291 kb on + strand, within mmsB at 780.292 kb on - strand, within mmsB at 780.354 kb on + strand, within mmsB at 780.627 kb on - strand at 780.627 kb on - strand at 780.627 kb on - strand at 780.695 kb on + strand at 780.713 kb on + strand at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.840 kb on - strand, within yHI9 at 780.840 kb on - strand, within yHI9 at 780.840 kb on - strand, within yHI9 at 780.881 kb on + strand, within yHI9 at 780.881 kb on + strand, within yHI9 at 780.881 kb on + strand, within yHI9 at 780.881 kb on + strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.968 kb on + strand, within yHI9 at 780.969 kb on - strand, within yHI9 at 780.969 kb on - strand, within yHI9 at 780.969 kb on - strand, within yHI9 at 781.202 kb on - strand, within yHI9 at 781.202 kb on - strand, within yHI9 at 781.410 kb on - strand, within yHI9 at 781.410 kb on - strand, within yHI9 at 781.574 kb on + strand at 781.634 kb on + strand at 781.634 kb on + strand at 781.635 kb on - strand at 781.673 kb on + strand at 781.673 kb on + strand at 781.673 kb on + strand at 781.674 kb on - strand at 781.675 kb on + strand at 781.896 kb on + strand, within glpG at 781.896 kb on + strand, within glpG at 781.896 kb on + strand, within glpG at 781.896 kb on + strand, within glpG at 781.896 kb on + strand, within glpG at 781.896 kb on + strand, within glpG at 781.897 kb on - strand, within glpG at 781.897 kb on - strand, within glpG at 781.897 kb on - strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.914 kb on + strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 781.915 kb on - strand, within glpG at 782.037 kb on + strand, within glpG at 782.037 kb on + strand, within glpG at 782.037 kb on + strand, within glpG at 782.038 kb on - strand, within glpG at 782.038 kb on - strand, within glpG at 782.038 kb on - strand, within glpG at 782.038 kb on - strand, within glpG at 782.038 kb on - strand, within glpG at 782.038 kb on - strand, within glpG at 782.038 kb on - strand, within glpG at 782.038 kb on - strand, within glpG at 782.073 kb on + strand, within glpG at 782.073 kb on + strand, within glpG at 782.073 kb on + strand, within glpG at 782.073 kb on + strand, within glpG at 782.074 kb on - strand, within glpG at 782.074 kb on - strand, within glpG at 782.074 kb on - strand, within glpG at 782.074 kb on - strand, within glpG at 782.074 kb on - strand, within glpG at 782.074 kb on - strand, within glpG at 782.074 kb on - strand, within glpG at 782.100 kb on + strand, within glpG at 782.100 kb on + strand, within glpG at 782.100 kb on + strand, within glpG at 782.100 kb on + strand, within glpG at 782.100 kb on + strand, within glpG at 782.101 kb on - strand, within glpG at 782.101 kb on - strand, within glpG at 782.101 kb on - strand, within glpG at 782.223 kb on + strand, within glpG at 782.223 kb on + strand, within glpG at 782.223 kb on + strand, within glpG at 782.223 kb on + strand, within glpG at 782.223 kb on + strand, within glpG at 782.224 kb on - strand, within glpG at 782.224 kb on - strand, within glpG at 782.224 kb on - strand, within glpG at 782.224 kb on - strand, within glpG at 782.224 kb on - strand, within glpG at 782.224 kb on - strand, within glpG at 782.241 kb on + strand, within glpG at 782.241 kb on + strand, within glpG at 782.241 kb on + strand, within glpG at 782.241 kb on + strand, within glpG at 782.241 kb on + strand, within glpG at 782.241 kb on + strand, within glpG at 782.242 kb on - strand, within glpG at 782.242 kb on - strand, within glpG at 782.242 kb on - strand, within glpG at 782.242 kb on - strand, within glpG at 782.242 kb on - strand, within glpG at 782.242 kb on - strand, within glpG at 782.302 kb on - strand, within glpG at 782.302 kb on - strand, within glpG at 782.302 kb on - strand, within glpG at 782.311 kb on + strand, within glpG at 782.311 kb on + strand, within glpG at 782.311 kb on + strand, within glpG at 782.311 kb on + strand, within glpG at 782.311 kb on + strand, within glpG at 782.312 kb on - strand, within glpG at 782.312 kb on - strand, within glpG at 782.312 kb on - strand, within glpG at 782.418 kb on - strand at 782.432 kb on + strand at 782.432 kb on + strand at 782.432 kb on + strand at 782.433 kb on - strand at 782.433 kb on - strand at 782.433 kb on - strand at 782.479 kb on + strand at 782.479 kb on + strand at 782.479 kb on + strand at 782.479 kb on + strand at 782.480 kb on - strand at 782.480 kb on - strand at 782.480 kb on - strand at 782.480 kb on - strand at 782.480 kb on - strand at 782.480 kb on - strand at 782.480 kb on - strand at 782.480 kb on - strand at 782.480 kb on - strand at 782.480 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 780,052 - mmsB OKGIIK_03510 0.38 -1.6 780,052 - mmsB OKGIIK_03510 0.38 +1.4 780,052 - mmsB OKGIIK_03510 0.38 +0.8 780,052 - mmsB OKGIIK_03510 0.38 +0.7 780,052 - mmsB OKGIIK_03510 0.38 -0.8 780,068 - mmsB OKGIIK_03510 0.40 -1.7 780,107 + mmsB OKGIIK_03510 0.44 -1.9 780,108 - mmsB OKGIIK_03510 0.44 +0.6 780,214 + mmsB OKGIIK_03510 0.56 +0.3 780,214 + mmsB OKGIIK_03510 0.56 -0.7 780,214 + mmsB OKGIIK_03510 0.56 -0.4 780,215 - mmsB OKGIIK_03510 0.56 -0.0 780,291 + mmsB OKGIIK_03510 0.65 -0.0 780,292 - mmsB OKGIIK_03510 0.65 +0.3 780,354 + mmsB OKGIIK_03510 0.72 +1.0 780,627 - -1.6 780,627 - -0.5 780,627 - +0.6 780,695 + +0.9 780,713 + -0.3 780,839 + yHI9 OKGIIK_03515 0.14 +1.0 780,839 + yHI9 OKGIIK_03515 0.14 -0.3 780,839 + yHI9 OKGIIK_03515 0.14 -0.6 780,839 + yHI9 OKGIIK_03515 0.14 +2.2 780,839 + yHI9 OKGIIK_03515 0.14 -0.2 780,839 + yHI9 OKGIIK_03515 0.14 +0.7 780,840 - yHI9 OKGIIK_03515 0.15 +1.2 780,840 - yHI9 OKGIIK_03515 0.15 -0.3 780,840 - yHI9 OKGIIK_03515 0.15 -0.2 780,881 + yHI9 OKGIIK_03515 0.19 +0.4 780,881 + yHI9 OKGIIK_03515 0.19 +0.2 780,881 + yHI9 OKGIIK_03515 0.19 -0.2 780,881 + yHI9 OKGIIK_03515 0.19 -0.8 780,882 - yHI9 OKGIIK_03515 0.19 +0.8 780,882 - yHI9 OKGIIK_03515 0.19 +0.8 780,882 - yHI9 OKGIIK_03515 0.19 +0.6 780,882 - yHI9 OKGIIK_03515 0.19 +0.4 780,882 - yHI9 OKGIIK_03515 0.19 -1.0 780,882 - yHI9 OKGIIK_03515 0.19 +1.2 780,882 - yHI9 OKGIIK_03515 0.19 +0.0 780,882 - yHI9 OKGIIK_03515 0.19 +2.3 780,968 + yHI9 OKGIIK_03515 0.29 +2.4 780,969 - yHI9 OKGIIK_03515 0.29 -0.7 780,969 - yHI9 OKGIIK_03515 0.29 +1.2 780,969 - yHI9 OKGIIK_03515 0.29 -0.8 781,202 - yHI9 OKGIIK_03515 0.56 -0.4 781,202 - yHI9 OKGIIK_03515 0.56 -0.5 781,410 - yHI9 OKGIIK_03515 0.79 -0.6 781,410 - yHI9 OKGIIK_03515 0.79 +0.2 781,574 + +0.7 781,634 + +0.9 781,634 + -0.2 781,635 - -0.3 781,673 + -0.6 781,673 + +1.3 781,673 + -0.4 781,674 - -0.5 781,675 + -1.2 781,896 + glpG OKGIIK_03520 0.20 -0.6 781,896 + glpG OKGIIK_03520 0.20 +0.8 781,896 + glpG OKGIIK_03520 0.20 -0.7 781,896 + glpG OKGIIK_03520 0.20 +0.2 781,896 + glpG OKGIIK_03520 0.20 +0.5 781,896 + glpG OKGIIK_03520 0.20 -0.3 781,897 - glpG OKGIIK_03520 0.20 -1.4 781,897 - glpG OKGIIK_03520 0.20 +0.4 781,897 - glpG OKGIIK_03520 0.20 +1.3 781,914 + glpG OKGIIK_03520 0.23 -2.3 781,914 + glpG OKGIIK_03520 0.23 +0.4 781,914 + glpG OKGIIK_03520 0.23 -1.9 781,914 + glpG OKGIIK_03520 0.23 -1.2 781,914 + glpG OKGIIK_03520 0.23 -1.2 781,914 + glpG OKGIIK_03520 0.23 +1.2 781,914 + glpG OKGIIK_03520 0.23 +0.1 781,914 + glpG OKGIIK_03520 0.23 +0.6 781,914 + glpG OKGIIK_03520 0.23 +0.8 781,914 + glpG OKGIIK_03520 0.23 -0.7 781,914 + glpG OKGIIK_03520 0.23 -0.4 781,914 + glpG OKGIIK_03520 0.23 -0.0 781,914 + glpG OKGIIK_03520 0.23 -1.0 781,915 - glpG OKGIIK_03520 0.23 -0.7 781,915 - glpG OKGIIK_03520 0.23 -1.1 781,915 - glpG OKGIIK_03520 0.23 -2.5 781,915 - glpG OKGIIK_03520 0.23 +0.6 781,915 - glpG OKGIIK_03520 0.23 -0.7 781,915 - glpG OKGIIK_03520 0.23 -0.1 781,915 - glpG OKGIIK_03520 0.23 -1.0 781,915 - glpG OKGIIK_03520 0.23 -0.5 781,915 - glpG OKGIIK_03520 0.23 -0.7 781,915 - glpG OKGIIK_03520 0.23 -1.1 781,915 - glpG OKGIIK_03520 0.23 -1.5 781,915 - glpG OKGIIK_03520 0.23 -1.2 781,915 - glpG OKGIIK_03520 0.23 -1.7 782,037 + glpG OKGIIK_03520 0.43 -0.0 782,037 + glpG OKGIIK_03520 0.43 +1.3 782,037 + glpG OKGIIK_03520 0.43 +1.6 782,038 - glpG OKGIIK_03520 0.43 -0.6 782,038 - glpG OKGIIK_03520 0.43 -0.2 782,038 - glpG OKGIIK_03520 0.43 -0.6 782,038 - glpG OKGIIK_03520 0.43 -1.2 782,038 - glpG OKGIIK_03520 0.43 -0.5 782,038 - glpG OKGIIK_03520 0.43 -0.8 782,038 - glpG OKGIIK_03520 0.43 +0.8 782,038 - glpG OKGIIK_03520 0.43 -1.4 782,073 + glpG OKGIIK_03520 0.49 -1.9 782,073 + glpG OKGIIK_03520 0.49 -0.0 782,073 + glpG OKGIIK_03520 0.49 +1.6 782,073 + glpG OKGIIK_03520 0.49 -0.3 782,074 - glpG OKGIIK_03520 0.49 -0.4 782,074 - glpG OKGIIK_03520 0.49 -0.2 782,074 - glpG OKGIIK_03520 0.49 +1.6 782,074 - glpG OKGIIK_03520 0.49 -1.9 782,074 - glpG OKGIIK_03520 0.49 +0.6 782,074 - glpG OKGIIK_03520 0.49 -0.5 782,074 - glpG OKGIIK_03520 0.49 +1.1 782,100 + glpG OKGIIK_03520 0.53 +0.8 782,100 + glpG OKGIIK_03520 0.53 -0.1 782,100 + glpG OKGIIK_03520 0.53 -1.0 782,100 + glpG OKGIIK_03520 0.53 +0.8 782,100 + glpG OKGIIK_03520 0.53 -1.2 782,101 - glpG OKGIIK_03520 0.53 -1.2 782,101 - glpG OKGIIK_03520 0.53 -0.4 782,101 - glpG OKGIIK_03520 0.53 +0.3 782,223 + glpG OKGIIK_03520 0.73 +1.2 782,223 + glpG OKGIIK_03520 0.73 -1.6 782,223 + glpG OKGIIK_03520 0.73 +1.9 782,223 + glpG OKGIIK_03520 0.73 -0.2 782,223 + glpG OKGIIK_03520 0.73 -0.6 782,224 - glpG OKGIIK_03520 0.73 +0.2 782,224 - glpG OKGIIK_03520 0.73 -1.5 782,224 - glpG OKGIIK_03520 0.73 -1.4 782,224 - glpG OKGIIK_03520 0.73 +1.6 782,224 - glpG OKGIIK_03520 0.73 -0.7 782,224 - glpG OKGIIK_03520 0.73 -0.7 782,241 + glpG OKGIIK_03520 0.76 -1.2 782,241 + glpG OKGIIK_03520 0.76 -0.4 782,241 + glpG OKGIIK_03520 0.76 -0.4 782,241 + glpG OKGIIK_03520 0.76 +0.6 782,241 + glpG OKGIIK_03520 0.76 -1.2 782,241 + glpG OKGIIK_03520 0.76 -2.3 782,242 - glpG OKGIIK_03520 0.76 +1.3 782,242 - glpG OKGIIK_03520 0.76 +0.6 782,242 - glpG OKGIIK_03520 0.76 -0.7 782,242 - glpG OKGIIK_03520 0.76 -0.7 782,242 - glpG OKGIIK_03520 0.76 -2.5 782,242 - glpG OKGIIK_03520 0.76 +1.3 782,302 - glpG OKGIIK_03520 0.86 -2.9 782,302 - glpG OKGIIK_03520 0.86 +0.6 782,302 - glpG OKGIIK_03520 0.86 +0.9 782,311 + glpG OKGIIK_03520 0.87 +0.4 782,311 + glpG OKGIIK_03520 0.87 +1.3 782,311 + glpG OKGIIK_03520 0.87 -0.7 782,311 + glpG OKGIIK_03520 0.87 +0.1 782,311 + glpG OKGIIK_03520 0.87 -0.2 782,312 - glpG OKGIIK_03520 0.88 -1.7 782,312 - glpG OKGIIK_03520 0.88 -0.2 782,312 - glpG OKGIIK_03520 0.88 -0.1 782,418 - +0.8 782,432 + +0.5 782,432 + +0.1 782,432 + -0.1 782,433 - -0.4 782,433 - -0.9 782,433 - -1.9 782,479 + -0.8 782,479 + +1.2 782,479 + -0.4 782,479 + +0.4 782,480 - -0.4 782,480 - +0.4 782,480 - +1.1 782,480 - -0.3 782,480 - -0.6 782,480 - -2.4 782,480 - +0.2 782,480 - -1.6 782,480 - +1.2 782,480 - +0.8
Or see this region's nucleotide sequence