Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06250

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06249 and MPMX19_06250 are separated by 191 nucleotidesMPMX19_06250 and MPMX19_06251 overlap by 4 nucleotides MPMX19_06249: MPMX19_06249 - hypothetical protein, at 1 to 930 _06249 MPMX19_06250: MPMX19_06250 - hypothetical protein, at 1,122 to 1,751 _06250 MPMX19_06251: MPMX19_06251 - hypothetical protein, at 1,748 to 2,320 _06251 Position (kb) 1 2Strain fitness (log2 ratio) -3 -2 -1 0 1at 0.939 kb on + strandat 0.939 kb on + strandat 0.939 kb on + strandat 0.939 kb on + strandat 0.939 kb on + strandat 0.939 kb on + strandat 0.983 kb on + strandat 0.983 kb on + strandat 0.984 kb on - strandat 0.984 kb on - strandat 2.394 kb on + strandat 2.395 kb on - strandat 2.460 kb on + strandat 2.460 kb on + strandat 2.460 kb on + strandat 2.460 kb on + strandat 2.461 kb on - strandat 2.461 kb on - strandat 2.563 kb on + strandat 2.666 kb on - strandat 2.713 kb on + strandat 2.713 kb on + strandat 2.713 kb on + strandat 2.713 kb on + strandat 2.713 kb on + strandat 2.713 kb on + strandat 2.713 kb on + strandat 2.713 kb on + strandat 2.714 kb on - strandat 2.714 kb on - strandat 2.714 kb on - strandat 2.714 kb on - strandat 2.714 kb on - strandat 2.714 kb on - strandat 2.714 kb on - strandat 2.714 kb on - strandat 2.714 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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939 + -0.0
939 + -0.1
939 + +1.7
939 + -1.0
939 + -1.6
939 + +0.2
983 + -1.0
983 + -2.4
984 - +0.7
984 - -0.6
2,394 + +0.5
2,395 - -0.1
2,460 + +0.3
2,460 + +0.3
2,460 + -1.3
2,460 + -0.2
2,461 - +0.7
2,461 - +0.5
2,563 + +0.0
2,666 - -0.3
2,713 + -1.3
2,713 + -1.4
2,713 + -2.0
2,713 + +1.5
2,713 + -0.8
2,713 + -0.5
2,713 + -3.0
2,713 + -0.7
2,714 - +0.3
2,714 - +1.5
2,714 - -1.9
2,714 - +0.2
2,714 - +1.5
2,714 - +0.5
2,714 - -1.2
2,714 - +0.2
2,714 - +1.5

Or see this region's nucleotide sequence