Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04738 and MPMX19_04739 overlap by 19 nucleotides MPMX19_04739 and MPMX19_04740 are separated by 50 nucleotides MPMX19_04740 and MPMX19_04741 are separated by 346 nucleotides
MPMX19_04738: MPMX19_04738 - hypothetical protein, at 128,663 to 129,841
_04738
MPMX19_04739: MPMX19_04739 - NAD(P)-dependent methylenetetrahydromethanopterin dehydrogenase, at 129,823 to 130,725
_04739
MPMX19_04740: MPMX19_04740 - hypothetical protein, at 130,776 to 131,810
_04740
MPMX19_04741: MPMX19_04741 - Formyltransferase/hydrolase complex Fhc subunit B, at 132,157 to 133,353
_04741
Position (kb)
130
131
132 Strain fitness (log2 ratio)
-2
-1
0
1 at 129.881 kb on + strand at 129.881 kb on + strand at 129.881 kb on + strand at 129.881 kb on + strand at 129.882 kb on - strand at 129.882 kb on - strand at 129.882 kb on - strand at 129.882 kb on - strand at 130.220 kb on + strand, within MPMX19_04739 at 130.221 kb on - strand, within MPMX19_04739 at 130.221 kb on - strand, within MPMX19_04739 at 130.424 kb on + strand, within MPMX19_04739 at 130.424 kb on + strand, within MPMX19_04739 at 130.424 kb on + strand, within MPMX19_04739 at 130.425 kb on - strand, within MPMX19_04739 at 130.425 kb on - strand, within MPMX19_04739 at 130.425 kb on - strand, within MPMX19_04739 at 130.425 kb on - strand, within MPMX19_04739 at 130.425 kb on - strand, within MPMX19_04739 at 130.622 kb on + strand, within MPMX19_04739 at 130.622 kb on + strand, within MPMX19_04739 at 130.710 kb on + strand at 130.769 kb on + strand at 130.774 kb on - strand at 131.186 kb on - strand, within MPMX19_04740 at 131.186 kb on - strand, within MPMX19_04740 at 131.186 kb on - strand, within MPMX19_04740 at 131.596 kb on + strand, within MPMX19_04740 at 131.596 kb on + strand, within MPMX19_04740 at 131.596 kb on + strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.815 kb on + strand at 131.815 kb on + strand at 131.816 kb on - strand at 131.816 kb on - strand at 131.816 kb on - strand at 131.816 kb on - strand at 131.853 kb on + strand at 131.858 kb on - strand at 131.858 kb on - strand at 131.875 kb on + strand at 131.911 kb on - strand at 131.990 kb on - strand at 131.993 kb on + strand at 132.031 kb on + strand at 132.031 kb on + strand at 132.032 kb on - strand at 132.043 kb on + strand at 132.044 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 129,881 + -0.3 129,881 + +0.5 129,881 + -0.3 129,881 + -1.2 129,882 - -1.9 129,882 - -0.9 129,882 - +0.9 129,882 - -0.2 130,220 + MPMX19_04739 0.44 +1.1 130,221 - MPMX19_04739 0.44 -1.1 130,221 - MPMX19_04739 0.44 -1.5 130,424 + MPMX19_04739 0.67 -0.7 130,424 + MPMX19_04739 0.67 -0.3 130,424 + MPMX19_04739 0.67 +0.1 130,425 - MPMX19_04739 0.67 -1.1 130,425 - MPMX19_04739 0.67 -2.3 130,425 - MPMX19_04739 0.67 +0.6 130,425 - MPMX19_04739 0.67 -0.5 130,425 - MPMX19_04739 0.67 -1.8 130,622 + MPMX19_04739 0.88 -1.2 130,622 + MPMX19_04739 0.88 +1.1 130,710 + -0.2 130,769 + -0.1 130,774 - +0.6 131,186 - MPMX19_04740 0.40 -0.9 131,186 - MPMX19_04740 0.40 -1.2 131,186 - MPMX19_04740 0.40 -0.3 131,596 + MPMX19_04740 0.79 -0.7 131,596 + MPMX19_04740 0.79 +0.3 131,596 + MPMX19_04740 0.79 -0.9 131,597 - MPMX19_04740 0.79 -0.4 131,597 - MPMX19_04740 0.79 -1.3 131,597 - MPMX19_04740 0.79 -1.5 131,597 - MPMX19_04740 0.79 -0.1 131,597 - MPMX19_04740 0.79 -1.2 131,597 - MPMX19_04740 0.79 -1.8 131,815 + -1.2 131,815 + -1.2 131,816 - -1.2 131,816 - -0.7 131,816 - -0.1 131,816 - +0.9 131,853 + -1.1 131,858 - -0.3 131,858 - -0.3 131,875 + +0.1 131,911 - -1.1 131,990 - -0.1 131,993 + +1.5 132,031 + +1.0 132,031 + -1.2 132,032 - +0.4 132,043 + +1.2 132,044 - -0.5
Or see this region's nucleotide sequence