Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04406 and MPMX19_04407 are separated by 117 nucleotides MPMX19_04407 and MPMX19_04408 overlap by 4 nucleotides MPMX19_04408 and MPMX19_04409 are separated by 60 nucleotides MPMX19_04409 and MPMX19_04410 are separated by 13 nucleotides
MPMX19_04406: MPMX19_04406 - Octaprenyl diphosphate synthase, at 770,711 to 771,727
_04406
MPMX19_04407: MPMX19_04407 - hypothetical protein, at 771,845 to 772,051
_04407
MPMX19_04408: MPMX19_04408 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 772,048 to 772,818
_04408
MPMX19_04409: MPMX19_04409 - hypothetical protein, at 772,879 to 773,769
_04409
MPMX19_04410: MPMX19_04410 - Oxalate:formate antiporter, at 773,783 to 775,078
_04410
Position (kb) 772
773 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 771.783 kb on - strand at 771.783 kb on - strand at 771.783 kb on - strand at 771.815 kb on - strand at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.997 kb on + strand, within MPMX19_04407 at 772.147 kb on + strand, within MPMX19_04408 at 772.441 kb on + strand, within MPMX19_04408 at 772.441 kb on + strand, within MPMX19_04408 at 772.442 kb on - strand, within MPMX19_04408 at 772.765 kb on + strand at 772.765 kb on + strand at 772.765 kb on + strand at 772.765 kb on + strand at 772.765 kb on + strand at 772.766 kb on - strand at 772.816 kb on + strand at 772.816 kb on + strand at 773.326 kb on + strand, within MPMX19_04409 at 773.326 kb on + strand, within MPMX19_04409 at 773.326 kb on + strand, within MPMX19_04409 at 773.326 kb on + strand, within MPMX19_04409 at 773.326 kb on + strand, within MPMX19_04409 at 773.327 kb on - strand, within MPMX19_04409 at 773.327 kb on - strand, within MPMX19_04409 at 773.327 kb on - strand, within MPMX19_04409 at 773.327 kb on - strand, within MPMX19_04409
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 771,783 - +0.1 771,783 - -0.1 771,783 - +0.8 771,815 - -0.5 771,941 + MPMX19_04407 0.46 -0.5 771,941 + MPMX19_04407 0.46 -0.9 771,941 + MPMX19_04407 0.46 -1.1 771,941 + MPMX19_04407 0.46 -3.4 771,941 + MPMX19_04407 0.46 +0.5 771,941 + MPMX19_04407 0.46 -2.4 771,941 + MPMX19_04407 0.46 -0.8 771,941 + MPMX19_04407 0.46 +0.2 771,941 + MPMX19_04407 0.46 -0.8 771,941 + MPMX19_04407 0.46 -0.6 771,941 + MPMX19_04407 0.46 -0.7 771,941 + MPMX19_04407 0.46 -1.1 771,941 + MPMX19_04407 0.46 -1.7 771,941 + MPMX19_04407 0.46 +1.4 771,941 + MPMX19_04407 0.46 -1.2 771,941 + MPMX19_04407 0.46 -1.9 771,941 + MPMX19_04407 0.46 -0.7 771,941 + MPMX19_04407 0.46 -0.8 771,941 + MPMX19_04407 0.46 -0.5 771,941 + MPMX19_04407 0.46 -0.5 771,941 + MPMX19_04407 0.46 -0.3 771,941 + MPMX19_04407 0.46 -0.1 771,941 + MPMX19_04407 0.46 -0.6 771,941 + MPMX19_04407 0.46 +0.4 771,941 + MPMX19_04407 0.46 -1.4 771,941 + MPMX19_04407 0.46 -1.2 771,941 + MPMX19_04407 0.46 -3.0 771,942 - MPMX19_04407 0.47 -0.7 771,942 - MPMX19_04407 0.47 -1.2 771,942 - MPMX19_04407 0.47 -1.1 771,942 - MPMX19_04407 0.47 -2.1 771,942 - MPMX19_04407 0.47 -1.6 771,942 - MPMX19_04407 0.47 -0.8 771,942 - MPMX19_04407 0.47 -1.7 771,942 - MPMX19_04407 0.47 -0.6 771,942 - MPMX19_04407 0.47 -1.5 771,942 - MPMX19_04407 0.47 -1.3 771,942 - MPMX19_04407 0.47 -1.1 771,942 - MPMX19_04407 0.47 +0.8 771,942 - MPMX19_04407 0.47 -0.2 771,942 - MPMX19_04407 0.47 +0.1 771,942 - MPMX19_04407 0.47 -1.5 771,942 - MPMX19_04407 0.47 +0.1 771,942 - MPMX19_04407 0.47 -1.0 771,942 - MPMX19_04407 0.47 -0.2 771,942 - MPMX19_04407 0.47 -1.8 771,942 - MPMX19_04407 0.47 -1.3 771,942 - MPMX19_04407 0.47 -1.0 771,942 - MPMX19_04407 0.47 -0.2 771,942 - MPMX19_04407 0.47 -0.5 771,942 - MPMX19_04407 0.47 -1.5 771,942 - MPMX19_04407 0.47 -1.9 771,997 + MPMX19_04407 0.73 -1.1 772,147 + MPMX19_04408 0.13 -1.2 772,441 + MPMX19_04408 0.51 +0.2 772,441 + MPMX19_04408 0.51 -1.5 772,442 - MPMX19_04408 0.51 -0.1 772,765 + +0.5 772,765 + -1.4 772,765 + -0.5 772,765 + -2.2 772,765 + -0.8 772,766 - +0.0 772,816 + -1.6 772,816 + -0.6 773,326 + MPMX19_04409 0.50 -1.2 773,326 + MPMX19_04409 0.50 -0.3 773,326 + MPMX19_04409 0.50 -2.7 773,326 + MPMX19_04409 0.50 -0.2 773,326 + MPMX19_04409 0.50 +1.8 773,327 - MPMX19_04409 0.50 -1.6 773,327 - MPMX19_04409 0.50 -2.8 773,327 - MPMX19_04409 0.50 -1.9 773,327 - MPMX19_04409 0.50 -1.2
Or see this region's nucleotide sequence